BLASTX nr result

ID: Coptis25_contig00001118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001118
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              297   3e-78
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   291   2e-76
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   290   4e-76
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...   283   4e-74
ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   277   3e-72

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  297 bits (761), Expect = 3e-78
 Identities = 170/391 (43%), Positives = 221/391 (56%), Gaps = 4/391 (1%)
 Frame = -3

Query: 1161 LPETFGGLTNLKEFRIDGSGITGRIPDFIGNWTRLDRLDMQGTNXXXXXXXXXXXXXXXX 982
            +PETFG L NL + R+DG+  +G+IPDFIGNWT+LDRLDMQGT+                
Sbjct: 364  IPETFGNLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISLLTNLT 423

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXXXXXISDLNVSNMAFPDLRELTKLEELVLRSCSITGP 802
                                       I+DLN S+MAFP+L+ LTK+EELVLR+CSIT  
Sbjct: 424  QLR------------------------IADLNGSSMAFPNLQNLTKMEELVLRNCSITDS 459

Query: 801  IPPYIGERMLNITTLDLSFNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            IP YIG +M ++ TLDLSFNR                                       
Sbjct: 460  IPDYIG-KMASLKTLDLSFNRLSGQVSDTWSLSQLEYLFLTNNSLSGT------------ 506

Query: 621  XXXXXXXQISPWLSKTRYNFDISYNNFNGTSEAS-CQETKLNAISSFPAQPASLVDWCLK 445
                    +  W+S +   FD+SYNNF G S  + CQ+  +N +SSF +  ++ V WCLK
Sbjct: 507  --------LPSWISDSNQKFDVSYNNFTGPSSLTVCQQRAVNLVSSFSSSDSNSVLWCLK 558

Query: 444  KNLPCPGKSKYYNLFVNCGGSGLFIDEEQYEQDLNVMGAASFF-FTDKWGCSSTGDFVGR 268
            K LPCPG +K+Y+LF+NCGGS +  +   YE+DL+  GA+ F  +++KWG SSTG F   
Sbjct: 559  KGLPCPGNAKHYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTGVFTNN 618

Query: 267  TSAKREVQTTTS-NSVGDLY-STARIAPFSLKYYGRCLRQGSYNVKLHFAEIMFTRDQRN 94
              A      T S N  G  Y  TAR +P SLKYYG C+R+GSY V+LHFAEIMF+ D+  
Sbjct: 619  DDAAYVATNTFSLNITGPEYLQTARTSPISLKYYGLCMRKGSYRVQLHFAEIMFSDDETF 678

Query: 93   NTLGRRIFDIYIQGERIWKDFNIAEEAGGVG 1
            ++LG+RIFD+ IQG  + KDFNI EEA GVG
Sbjct: 679  SSLGKRIFDVSIQGVTVLKDFNIVEEAKGVG 709


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  291 bits (746), Expect = 2e-76
 Identities = 161/390 (41%), Positives = 221/390 (56%), Gaps = 3/390 (0%)
 Frame = -3

Query: 1161 LPETFGGLTNLKEFRIDGSGITGRIPDFIGNWTRLDRLDMQGTNXXXXXXXXXXXXXXXX 982
            +P++FG LTNL +FR+DG+G++G+IP+FIGNW  LDRLDMQGT+                
Sbjct: 162  IPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTISQLKNLT 221

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXXXXXISDLNVSNMAFPDLRELTKLEELVLRSCSITGP 802
                                       ISDL  S ++FP+L ++  ++ELVLR+C I G 
Sbjct: 222  QLR------------------------ISDLKGSFISFPNLTDMINMKELVLRNCLINGS 257

Query: 801  IPPYIGERMLNITTLDLSFNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            IP YIGE M  ++TLDLSFN                                        
Sbjct: 258  IPEYIGE-MNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSG---------- 306

Query: 621  XXXXXXXQISPWLSKTRYNFDISYNNFNGTSEASCQETKLNAISSFPAQPASLVDWCLKK 442
                   ++  W+  ++ N D+SYNNF+G++ ASCQ++ +N I+S+P      V WCLKK
Sbjct: 307  -------EVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKK 359

Query: 441  NLPCPGKSKYYNLFVNCGGSGLFIDEEQYEQDLNVMGAASFF-FTDKWGCSSTGDFVGRT 265
            +LPC GK++Y++LF+NCGG+ +  D   YE+DL   G ++FF  ++KW  SSTG F+G  
Sbjct: 360  DLPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDE 419

Query: 264  SAKREVQTTTSNSVGD--LYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIMFTRDQRNN 91
            +A          +V     Y  AR++P SLKYYG CLR GSYNVKLHFAEIM++ DQ  +
Sbjct: 420  NADYLATNKFGLNVSGPRYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFS 479

Query: 90   TLGRRIFDIYIQGERIWKDFNIAEEAGGVG 1
            +LG+RIFDI IQG+ + KDFNI E AGGVG
Sbjct: 480  SLGKRIFDISIQGKLVKKDFNIVEAAGGVG 509


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  290 bits (743), Expect = 4e-76
 Identities = 160/390 (41%), Positives = 221/390 (56%), Gaps = 3/390 (0%)
 Frame = -3

Query: 1161 LPETFGGLTNLKEFRIDGSGITGRIPDFIGNWTRLDRLDMQGTNXXXXXXXXXXXXXXXX 982
            +P++FG LTNL +FR+DG+G++G+IP+FIGNW  LDRLDMQGT+                
Sbjct: 199  IPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTISQLKNLT 258

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXXXXXISDLNVSNMAFPDLRELTKLEELVLRSCSITGP 802
                                       ISDL  S ++FP+L ++  ++ELVLR+C I G 
Sbjct: 259  QLR------------------------ISDLKGSFISFPNLTDMINMKELVLRNCLINGS 294

Query: 801  IPPYIGERMLNITTLDLSFNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            IP YIGE M  ++TLDLSFN                                        
Sbjct: 295  IPEYIGE-MNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSG---------- 343

Query: 621  XXXXXXXQISPWLSKTRYNFDISYNNFNGTSEASCQETKLNAISSFPAQPASLVDWCLKK 442
                   ++  W+  ++ N D+SYNNF+G++ ASCQ++ +N I+S+P      V WCLKK
Sbjct: 344  -------EVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKK 396

Query: 441  NLPCPGKSKYYNLFVNCGGSGLFIDEEQYEQDLNVMGAASFF-FTDKWGCSSTGDFVGRT 265
            +LPC GK++Y++LF+NCGG+ +  D   YE+DL   G ++FF  ++KW  SSTG F+G  
Sbjct: 397  DLPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDE 456

Query: 264  SAKREVQTTTSNSVGD--LYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIMFTRDQRNN 91
            +A          +V     Y  AR++P SLKYYG CLR GSYNVKLHFAEIM++ DQ  +
Sbjct: 457  NADYLATNKFGLNVSGPRYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFS 516

Query: 90   TLGRRIFDIYIQGERIWKDFNIAEEAGGVG 1
            +LG+RIFDI IQG+ + KDFNI + AGGVG
Sbjct: 517  SLGKRIFDISIQGKLVKKDFNIVDAAGGVG 546


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53440-like [Cucumis sativus]
            gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
            receptor-like serine/threonine-protein kinase
            At1g53440-like [Cucumis sativus]
          Length = 1012

 Score =  283 bits (725), Expect = 4e-74
 Identities = 154/388 (39%), Positives = 219/388 (56%), Gaps = 1/388 (0%)
 Frame = -3

Query: 1161 LPETFGGLTNLKEFRIDGSGITGRIPDFIGNWTRLDRLDMQGTNXXXXXXXXXXXXXXXX 982
            +P ++G L NL +FRIDG+ ++GR+P+FIGNWT+L+RLD+QGT+                
Sbjct: 201  IPRSYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLERLDLQGTSMETPIPRGISDLKNLT 260

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXXXXXISDLNVSNMAFPDLRELTKLEELVLRSCSITGP 802
                                       I+DL     +FP+L +LT L+ELVLR+C I   
Sbjct: 261  ELR------------------------ITDLKGLPTSFPNLTQLTSLKELVLRNCLIRDR 296

Query: 801  IPPYIGERMLNITTLDLSFNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            IP YIG     + TLDLSFN                                        
Sbjct: 297  IPEYIG-LFSGLKTLDLSFNELSGPIPDTFQNLERVTQFLFLTNNSLSG----------- 344

Query: 621  XXXXXXXQISPWLSKTRYNFDISYNNFNGTSEASCQETKLNAISSFPAQPASLVDWCLKK 442
                   Q+  W+  +  + D+SYNNF G+  +SCQ++ +N +SS+       V WCL+K
Sbjct: 345  -------QVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNETVSWCLRK 397

Query: 441  NLPCPGKSKYYNLFVNCGGSGLFIDEEQYEQDLNVMGAASFF-FTDKWGCSSTGDFVGRT 265
            +LPC  ++++++LF+NCGG  + +D   YE+D+   G ++F  F+D+W  SSTG F+G  
Sbjct: 398  DLPCARENRFHSLFINCGGQRMEVDGNDYEEDVTPGGKSNFLSFSDRWAYSSTGVFLGDE 457

Query: 264  SAKREVQTTTSNSVGDLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIMFTRDQRNNTL 85
            +A     T+T++S+ ++Y TAR+AP SLKYYG CLR+GSYNVKLHFAEIM+T DQ  ++L
Sbjct: 458  NANYRA-TSTNSSIPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSL 516

Query: 84   GRRIFDIYIQGERIWKDFNIAEEAGGVG 1
            G RIFDI IQG+ + KDFNI E+AGGVG
Sbjct: 517  GERIFDISIQGKLVQKDFNIMEKAGGVG 544


>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
            predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  277 bits (709), Expect = 3e-72
 Identities = 151/390 (38%), Positives = 216/390 (55%), Gaps = 3/390 (0%)
 Frame = -3

Query: 1161 LPETFGGLTNLKEFRIDGSGITGRIPDFIGNWTRLDRLDMQGTNXXXXXXXXXXXXXXXX 982
            +P+TFG L NL +FRIDGS ++G+IP+FIGNWT ++RLD+QGT+                
Sbjct: 209  IPDTFGNLKNLTDFRIDGSELSGKIPNFIGNWTNIERLDLQGTSMEGPIPSTISLLKKLE 268

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXXXXXISDLNVSNMAFPDLRELTKLEELVLRSCSITGP 802
                                       ISDLN S+  FPDL+++  +  L+LRSCS+ G 
Sbjct: 269  ELR------------------------ISDLNGSSSTFPDLKDMKNMTTLILRSCSLNGT 304

Query: 801  IPPYIGERMLNITTLDLSFNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 622
            IP YIG+ M ++ TLDLSFN+                                       
Sbjct: 305  IPEYIGD-MASLDTLDLSFNKFTGQIPVSLESLAKLRFMFLNNNLLTG------------ 351

Query: 621  XXXXXXXQISPWLSKTRYNFDISYNNFNGTSEASCQETKLNAISSFPAQPASLVDWCLKK 442
                   ++  W+  ++   D+SYNNF G++++SCQ+  +N +SS      + + WCL K
Sbjct: 352  -------EVPGWILNSKNELDLSYNNFTGSTQSSCQQLSVNLVSSHVTTGNNTISWCLNK 404

Query: 441  NLPCPGKSKYYNLFVNCGGSGLFIDEEQYEQDLNVMGAASFF-FTDKWGCSSTGDFVGRT 265
            +L C  K ++++LF+NCGG+ + + + +YE+D    GAA F   +++WG SSTG ++   
Sbjct: 405  DLVCSRKPEHHSLFINCGGNSMTVGDNEYEEDATSGGAAEFVSLSERWGYSSTGTYMNND 464

Query: 264  SAKREVQTTTS-NSVGD-LYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIMFTRDQRNN 91
             A  + Q +   N  G+  Y TAR+AP SLKYY  C+R GSY VKLHFAEIM++ D   +
Sbjct: 465  GAGYKAQNSFGLNVTGEGFYQTARLAPQSLKYYALCMRAGSYKVKLHFAEIMYSNDSTFS 524

Query: 90   TLGRRIFDIYIQGERIWKDFNIAEEAGGVG 1
            +LGRRIFDI IQGE + KDFNI E+AGGVG
Sbjct: 525  SLGRRIFDISIQGEVVRKDFNIMEKAGGVG 554