BLASTX nr result

ID: Coptis25_contig00001117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001117
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              162   3e-38
emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]   162   3e-38
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...   159   3e-37
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...   157   1e-36
ref|XP_003541159.1| PREDICTED: probable LRR receptor-like serine...   154   6e-36

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/116 (66%), Positives = 95/116 (81%)
 Frame = -2

Query: 351  YKVKLHFAEIMFTFDKRNNTAGRRIFDIYIQGKRIWKDFNIAEEAGGVGKSFVMEYNANV 172
            Y+V+LHFAEIMF+ D+  ++ G+RIFD+ IQG  + KDFNI EEA GVGK+   ++  +V
Sbjct: 661  YRVQLHFAEIMFSDDETFSSLGKRIFDVSIQGVTVLKDFNIVEEAKGVGKAITKDFETSV 720

Query: 171  TGSTLEIHLYWAGKGTIAVPRRGIYGPLISAISVKPNFDPSTGLSAGTIAGIVVSS 4
             GSTLEIHLYWAGKGT A+P RG+YGPLISAI+V PNFD STGLSAG IAGIV++S
Sbjct: 721  NGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGLSAGAIAGIVIAS 776


>emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]
          Length = 970

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/116 (66%), Positives = 95/116 (81%)
 Frame = -2

Query: 351 YKVKLHFAEIMFTFDKRNNTAGRRIFDIYIQGKRIWKDFNIAEEAGGVGKSFVMEYNANV 172
           Y+V+LHFAEIMF+ D+  ++ G+RIFD+ IQG  + KDFNI EEA GVGK+   ++  +V
Sbjct: 450 YRVQLHFAEIMFSDDETFSSLGKRIFDVSIQGVTVLKDFNIVEEAKGVGKAITKDFETSV 509

Query: 171 TGSTLEIHLYWAGKGTIAVPRRGIYGPLISAISVKPNFDPSTGLSAGTIAGIVVSS 4
            GSTLEIHLYWAGKGT A+P RG+YGPLISAI+V PNFD STGLSAG IAGIV++S
Sbjct: 510 NGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGLSAGAIAGIVIAS 565


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/119 (68%), Positives = 94/119 (78%), Gaps = 2/119 (1%)
 Frame = -2

Query: 351 YKVKLHFAEIMFTFDKRNNTAGRRIFDIYIQGKRIWKDFNIAEEAGGVGKSFVM-EYNAN 175
           Y VKLHFAEIM+T D+  ++ G RIFDI IQGK + KDFNI E+AGGVGK+F++ E N  
Sbjct: 496 YNVKLHFAEIMYTSDQTFSSLGERIFDISIQGKLVQKDFNIMEKAGGVGKTFILEESNIL 555

Query: 174 VTGSTLEIHLYWAGKGTIAVPRRGIYGPLISAISVKPNFDPSTG-LSAGTIAGIVVSSF 1
           V GSTLEIHLYWAGKGT A+P RG+YGPLIS I+V PNFD   G LSAG IAGIVV SF
Sbjct: 556 VNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVEPGTLSAGAIAGIVVGSF 614


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/117 (65%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
 Frame = -2

Query: 351 YKVKLHFAEIMFTFDKRNNTAGRRIFDIYIQGKRIWKDFNIAEEAGGVGKSFVMEYNANV 172
           Y VKLHFAEIMF+ D++ ++ GRRIFD+ +QG +  KDFNI EEAGGVGK    ++N +V
Sbjct: 503 YNVKLHFAEIMFSDDQKFSSLGRRIFDVSVQGHKYLKDFNIMEEAGGVGKGITRDFNVDV 562

Query: 171 TGSTLEIHLYWAGKGTIAVPRRGIYGPLISAISVKPNFD-PSTGLSAGTIAGIVVSS 4
             STLEIHL WAGKGT A+P RG+YGPLISAI+V PNF  PS GLSAG IAGIV+ S
Sbjct: 563 NDSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVIGS 619


>ref|XP_003541159.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Glycine max]
          Length = 1149

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/117 (65%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
 Frame = -2

Query: 351 YKVKLHFAEIMFTFDKRNNTAGRRIFDIYIQGKRIWKDFNIAEEAGGVGKSFVMEYNANV 172
           YKVKLHFAEIMF+ D+  ++ GRRIFD+ IQG R  KDFNI EEAGGVGK+   E++ +V
Sbjct: 639 YKVKLHFAEIMFSNDQTFSSLGRRIFDVSIQGIRYLKDFNIMEEAGGVGKNITKEFDVDV 698

Query: 171 TGSTLEIHLYWAGKGTIAVPRRGIYGPLISAISVKPNFD-PSTGLSAGTIAGIVVSS 4
              TLEIHLYWAGKGT A+P RG+YGPLISAI + PNF+ PS GLS G I GIV +S
Sbjct: 699 DDGTLEIHLYWAGKGTTAIPDRGVYGPLISAIEMIPNFENPSKGLSTGVIVGIVAAS 755


Top