BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001115
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...   128   2e-27
sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   118   1e-24
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   118   1e-24
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]          118   1e-24
gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]                     118   1e-24

>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score =  128 bits (321), Expect = 2e-27
 Identities = 86/155 (55%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
 Frame = +1

Query: 109 ASTLSTFTLRXXXXXXXXXXXXXX--KQVLISPLRKNPKFSRNATFLPPISAVV-DEKIA 279
           A++LST TLR                KQ L  P R NPK    ATF+ PISAV   EKI 
Sbjct: 2   AASLSTLTLRSPSCPTLSSSFPTHSFKQTLDFPFR-NPKIIHRATFVRPISAVAAPEKIE 60

Query: 280 TIGKTLSELTLVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDVV 456
            IG  LS LTL EAR LVDWLQD+LGVS                       E KTEFDV+
Sbjct: 61  KIGTELSNLTLEEARILVDWLQDKLGVSAAAFAPAAVAVAPGAVADAPAVVEEKTEFDVM 120

Query: 457 IEEVPSNARIATIKAVRSMTSLALKEAKELIEGLP 561
           IE+VPSNARIATIKAVR++TSLALKEAKELIEGLP
Sbjct: 121 IEDVPSNARIATIKAVRALTSLALKEAKELIEGLP 155


>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  118 bits (296), Expect = 1e-24
 Identities = 77/156 (49%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
 Frame = +1

Query: 109 ASTLSTFTLRXXXXXXXXXXXXXX---KQVLISPLRKNPKFSRNATFLPPISAV-VDEKI 276
           ASTLST TLR                 K+ L  P+R     +R ATFL P++AV   EK+
Sbjct: 2   ASTLSTITLRSPSPSTATSTHASIPFPKKTLEFPIRTPKLQNRRATFLRPLAAVEAPEKV 61

Query: 277 ATIGKTLSELTLVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDV 453
             +G  +S LTL +A+ LV++LQD+LGV+                       E KTEFDV
Sbjct: 62  VQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPAVVEEKTEFDV 121

Query: 454 VIEEVPSNARIATIKAVRSMTSLALKEAKELIEGLP 561
           VI+EVPSNARIATIKAVR++TSLALKEAKELIEGLP
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  118 bits (296), Expect = 1e-24
 Identities = 77/156 (49%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
 Frame = +1

Query: 109 ASTLSTFTLRXXXXXXXXXXXXXX---KQVLISPLRKNPKFSRNATFLPPISAV-VDEKI 276
           ASTLST TLR                 K+ L  P+R      R ATFL P++AV   EK+
Sbjct: 2   ASTLSTITLRSPSPSTASSTHASIPFPKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKV 61

Query: 277 ATIGKTLSELTLVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDV 453
             +G  +S LTL +A+ LV++LQD+LGV+                       E KTEFDV
Sbjct: 62  VQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDV 121

Query: 454 VIEEVPSNARIATIKAVRSMTSLALKEAKELIEGLP 561
           VI+EVPSNARIATIKAVR++TSLALKEAKELIEGLP
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score =  118 bits (296), Expect = 1e-24
 Identities = 77/156 (49%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
 Frame = +1

Query: 109 ASTLSTFTLRXXXXXXXXXXXXXX---KQVLISPLRKNPKFSRNATFLPPISAV-VDEKI 276
           ASTLST TLR                 K+ L  P+R      R ATFL P++AV   EK+
Sbjct: 2   ASTLSTITLRSPSPSTASSTHASIPFPKKALEFPIRTPKLHHRRATFLRPLAAVEAPEKV 61

Query: 277 ATIGKTLSELTLVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDV 453
             +G  +S LTL +A+ LV++LQD+LGV+                       E KTEFDV
Sbjct: 62  VQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDV 121

Query: 454 VIEEVPSNARIATIKAVRSMTSLALKEAKELIEGLP 561
           VI+EVPSNARIATIKAVR++TSLALKEAKELIEGLP
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157


>gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]
          Length = 161

 Score =  118 bits (296), Expect = 1e-24
 Identities = 77/156 (49%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
 Frame = +1

Query: 109 ASTLSTFTLRXXXXXXXXXXXXXX---KQVLISPLRKNPKFSRNATFLPPISAV-VDEKI 276
           ASTLST TLR                 K+ L  P+R      R ATFL P++AV   EK+
Sbjct: 2   ASTLSTITLRSPSPSTATSTHASIPFPKKTLEFPIRTPKLHHRRATFLRPLAAVEAPEKV 61

Query: 277 ATIGKTLSELTLVEARSLVDWLQDELGVSXXXXXXXXXXXXXXXXXXXXXXXE-KTEFDV 453
             +G  +S LTL +A+ LV++LQD+LGV+                       E KTEFDV
Sbjct: 62  VQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPGVVEEKTEFDV 121

Query: 454 VIEEVPSNARIATIKAVRSMTSLALKEAKELIEGLP 561
           VI+EVPSNARIATIKAVR++TSLALKEAKELIEGLP
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLP 157