BLASTX nr result
ID: Coptis25_contig00001114
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001114 (786 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29146.3| unnamed protein product [Vitis vinifera] 87 4e-15 ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255... 87 4e-15 emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera] 87 5e-15 ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|2... 77 4e-12 ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|2... 76 7e-12 >emb|CBI29146.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 87.0 bits (214), Expect = 4e-15 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Frame = +3 Query: 18 GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197 GD LP S S SYC + +N +E QS ++H+DS L + + + D + Sbjct: 422 GDSGSLPQGSPDVSTSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 481 Query: 198 TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374 + + +FS + +P + ++ NY+K F+K+ G + + R +YD D Y+ Sbjct: 482 NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 538 Query: 375 FTLPDETLLFDKVVFRNRIESGVFLLCG 458 P + LLFD+V ++NRIESG LLCG Sbjct: 539 LKNPAQNLLFDRVFYKNRIESGSLLLCG 566 >ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255666 [Vitis vinifera] Length = 586 Score = 87.0 bits (214), Expect = 4e-15 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Frame = +3 Query: 18 GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197 GD LP S S SYC + +N +E QS ++H+DS L + + + D + Sbjct: 428 GDSGSLPQGSPDVSTSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 487 Query: 198 TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374 + + +FS + +P + ++ NY+K F+K+ G + + R +YD D Y+ Sbjct: 488 NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 544 Query: 375 FTLPDETLLFDKVVFRNRIESGVFLLCG 458 P + LLFD+V ++NRIESG LLCG Sbjct: 545 LKNPAQNLLFDRVFYKNRIESGSLLLCG 572 >emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera] Length = 724 Score = 86.7 bits (213), Expect = 5e-15 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Frame = +3 Query: 18 GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197 GD LP S S SYC + +N +E QS ++H+DS L + + + D + Sbjct: 566 GDSGSLPQGSPDVSXSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 625 Query: 198 TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374 + + +FS + +P + ++ NY+K F+K+ G + + R +YD D Y+ Sbjct: 626 NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 682 Query: 375 FTLPDETLLFDKVVFRNRIESGVFLLCG 458 P + LLFD+V ++NRIESG LLCG Sbjct: 683 LKNPAQNLLFDRVFYKNRIESGSLLLCG 710 >ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|222865500|gb|EEF02631.1| predicted protein [Populus trichocarpa] Length = 593 Score = 77.0 bits (188), Expect = 4e-12 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 2/164 (1%) Frame = +3 Query: 12 PSGDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDND 191 P GD S +A+A+ C +NK+ E S SH S L A G+ ++ D Sbjct: 433 PVGDCASFSQASSNAAAN-CYPNSFTTNKQ---ELVSAHSHSASVLSATGSSKEPTLDEV 488 Query: 192 NVTYSRASQDRLLRFSFAHEPKED-KIRHEMGNYIKMFQKEIQK-GDDCRVARPRHYDED 365 + S + +FSFA +P + +++ ++ Y+K F+K+++K G + ++ R H+D D Sbjct: 489 ILNSSETPYSQRFQFSFARKPNDSIEVQQDIRKYVKSFEKDMEKTGVNSKILRSNHFDLD 548 Query: 366 YYDFTLPDETLLFDKVVFRNRIESGVFLLCGN*GMSM*IRFSPF 497 Y+ + LFD V NRI+SG LLC M + FSPF Sbjct: 549 EYNSQASRQNFLFDTVFLNNRIQSGSMLLCDG---GMGVSFSPF 589 >ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|222851742|gb|EEE89289.1| predicted protein [Populus trichocarpa] Length = 586 Score = 76.3 bits (186), Expect = 7e-12 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 7/171 (4%) Frame = +3 Query: 6 DPPS-----GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQ 170 DPP GD +++A+A+ +N S +EL SH S L G+ Q Sbjct: 419 DPPINLVGVGDCASFSQENFNAAANCYLNSFATSKQEL----VGTHSHGASVLSTTGSCQ 474 Query: 171 DFLKDNDNVTYSRASQDRLLRFSFAHEPKED-KIRHEMGNYIKMFQKEIQKGD-DCRVAR 344 + + + S R L+FSFA +P + +++ ++ Y+K F+K+ +K + ++ R Sbjct: 475 EPALEEVTLNSSETPDSRRLQFSFAQKPNDSIELQQDIRKYVKSFEKDTEKPSINSKILR 534 Query: 345 PRHYDEDYYDFTLPDETLLFDKVVFRNRIESGVFLLCGN*GMSM*IRFSPF 497 H+D D Y+ + LFD V NRI+SG LLC M + FSPF Sbjct: 535 SNHFDLDEYNLQASRQNFLFDTVFLNNRIQSGSVLLCDG---GMGVSFSPF 582