BLASTX nr result

ID: Coptis25_contig00001114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001114
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29146.3| unnamed protein product [Vitis vinifera]               87   4e-15
ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255...    87   4e-15
emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera]    87   5e-15
ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12
ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|2...    76   7e-12

>emb|CBI29146.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
 Frame = +3

Query: 18  GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197
           GD   LP  S   S SYC +  +N  +E     QS ++H+DS L    +  +   + D +
Sbjct: 422 GDSGSLPQGSPDVSTSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 481

Query: 198 TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374
             +     +  +FS + +P      + ++ NY+K F+K+   G + +  R  +YD D Y+
Sbjct: 482 NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 538

Query: 375 FTLPDETLLFDKVVFRNRIESGVFLLCG 458
              P + LLFD+V ++NRIESG  LLCG
Sbjct: 539 LKNPAQNLLFDRVFYKNRIESGSLLLCG 566


>ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255666 [Vitis vinifera]
          Length = 586

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
 Frame = +3

Query: 18  GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197
           GD   LP  S   S SYC +  +N  +E     QS ++H+DS L    +  +   + D +
Sbjct: 428 GDSGSLPQGSPDVSTSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 487

Query: 198 TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374
             +     +  +FS + +P      + ++ NY+K F+K+   G + +  R  +YD D Y+
Sbjct: 488 NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 544

Query: 375 FTLPDETLLFDKVVFRNRIESGVFLLCG 458
              P + LLFD+V ++NRIESG  LLCG
Sbjct: 545 LKNPAQNLLFDRVFYKNRIESGSLLLCG 572


>emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera]
          Length = 724

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
 Frame = +3

Query: 18   GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNV 197
            GD   LP  S   S SYC +  +N  +E     QS ++H+DS L    +  +   + D +
Sbjct: 566  GDSGSLPQGSPDVSXSYCHSSCLNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGL 625

Query: 198  TYSRASQDRLLRFSFAHEPKE-DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYD 374
              +     +  +FS + +P      + ++ NY+K F+K+   G + +  R  +YD D Y+
Sbjct: 626  NGAIGKHGQKFQFSISRKPSGISGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYN 682

Query: 375  FTLPDETLLFDKVVFRNRIESGVFLLCG 458
               P + LLFD+V ++NRIESG  LLCG
Sbjct: 683  LKNPAQNLLFDRVFYKNRIESGSLLLCG 710


>ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|222865500|gb|EEF02631.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
 Frame = +3

Query: 12  PSGDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDND 191
           P GD       S +A+A+ C      +NK+   E  S  SH  S L A G+ ++   D  
Sbjct: 433 PVGDCASFSQASSNAAAN-CYPNSFTTNKQ---ELVSAHSHSASVLSATGSSKEPTLDEV 488

Query: 192 NVTYSRASQDRLLRFSFAHEPKED-KIRHEMGNYIKMFQKEIQK-GDDCRVARPRHYDED 365
            +  S     +  +FSFA +P +  +++ ++  Y+K F+K+++K G + ++ R  H+D D
Sbjct: 489 ILNSSETPYSQRFQFSFARKPNDSIEVQQDIRKYVKSFEKDMEKTGVNSKILRSNHFDLD 548

Query: 366 YYDFTLPDETLLFDKVVFRNRIESGVFLLCGN*GMSM*IRFSPF 497
            Y+     +  LFD V   NRI+SG  LLC      M + FSPF
Sbjct: 549 EYNSQASRQNFLFDTVFLNNRIQSGSMLLCDG---GMGVSFSPF 589


>ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|222851742|gb|EEE89289.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
 Frame = +3

Query: 6   DPPS-----GDHNLLPPTSYSASASYCINRLMNSNKELDEESQSMLSHDDSALLAKGNRQ 170
           DPP      GD       +++A+A+  +N    S +EL        SH  S L   G+ Q
Sbjct: 419 DPPINLVGVGDCASFSQENFNAAANCYLNSFATSKQEL----VGTHSHGASVLSTTGSCQ 474

Query: 171 DFLKDNDNVTYSRASQDRLLRFSFAHEPKED-KIRHEMGNYIKMFQKEIQKGD-DCRVAR 344
           +   +   +  S     R L+FSFA +P +  +++ ++  Y+K F+K+ +K   + ++ R
Sbjct: 475 EPALEEVTLNSSETPDSRRLQFSFAQKPNDSIELQQDIRKYVKSFEKDTEKPSINSKILR 534

Query: 345 PRHYDEDYYDFTLPDETLLFDKVVFRNRIESGVFLLCGN*GMSM*IRFSPF 497
             H+D D Y+     +  LFD V   NRI+SG  LLC      M + FSPF
Sbjct: 535 SNHFDLDEYNLQASRQNFLFDTVFLNNRIQSGSVLLCDG---GMGVSFSPF 582


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