BLASTX nr result

ID: Coptis25_contig00001113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001113
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36792.1| NAC domain class transcription factor [Malus x do...    71   8e-10
ref|NP_001236886.1| NAC domain protein NAC5 [Glycine max] gi|625...    68   5e-09
ref|NP_001235899.1| no apical meristem-like protein [Glycine max...    68   5e-09
dbj|BAC53810.1| OsNAC1 protein [Oryza sativa]                          67   2e-08
emb|CBI19647.3| unnamed protein product [Vitis vinifera]               66   2e-08

>gb|ADL36792.1| NAC domain class transcription factor [Malus x domestica]
          Length = 359

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = +2

Query: 929  HYSNSEDPKAAESGYWKATGECRRIFTNSSIIGSRSTLEFYTGQAPNGMETYWIMQYCRT 1108
            ++  S +      G W+A GE  RIF+NSSI G R+TLEFY GQAP+  +T W+MQ    
Sbjct: 58   YFIRSSESNPTNIGQWRAKGEASRIFSNSSIYGWRATLEFYRGQAPHETKTNWVMQEYWI 117

Query: 1109 DQKGHSEIAKAKVKWAD 1159
             QK  SE +K K+   D
Sbjct: 118  TQKKSSESSKLKINVQD 134


>ref|NP_001236886.1| NAC domain protein NAC5 [Glycine max] gi|62546191|gb|AAX85982.1| NAC5
            protein [Glycine max] gi|66394518|gb|AAY46125.1| NAC
            domain protein NAC5 [Glycine max]
          Length = 357

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +2

Query: 953  KAAESGYWKATGECRRIFTNSSIIGSRSTLEFYTGQAPNGMETYWIMQYCRTDQK--GHS 1126
            +A ESGYWKATG+ + IF   S++G + TL FY G+AP G +T W+M   R D K   H+
Sbjct: 92   RATESGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLDGKFSFHN 151

Query: 1127 EIAKAKVKWADDCGILADSKRYRKDTRSTVSFQGLRGSYMVFLS 1258
                AK +W   C +   S   ++   S +      G+ MV+ S
Sbjct: 152  LPKTAKNEWV-ICRVFQKSSGVKRTHISGMMMLDSYGNEMVYSS 194


>ref|NP_001235899.1| no apical meristem-like protein [Glycine max]
            gi|22597158|gb|AAN03466.1| no apical meristem-like
            protein [Glycine max]
          Length = 357

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +2

Query: 953  KAAESGYWKATGECRRIFTNSSIIGSRSTLEFYTGQAPNGMETYWIMQYCRTDQK--GHS 1126
            +A ESGYWKATG+ + IF   S++G + TL FY G+AP G +T W+M   R D K   H+
Sbjct: 92   RATESGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLDGKFSFHT 151

Query: 1127 EIAKAKVKWADDCGILADSKRYRKDTRSTVSFQGLRGSYMVFLS 1258
                AK +W   C +   S   ++   S +      G+ MV+ S
Sbjct: 152  LPKTAKNEWV-ICRVFQKSSGVKRTHISGMMMLDSYGNEMVYSS 194


>dbj|BAC53810.1| OsNAC1 protein [Oryza sativa]
          Length = 347

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = +2

Query: 953  KAAESGYWKATGECRRIFTNSSIIGSRSTLEFYTGQAPNGMETYWIMQYCRTDQKGHSEI 1132
            +A ESGYWKATG+ R IF   +++G + TL FYTG+AP G +T W+M   R   K  +  
Sbjct: 78   RATESGYWKATGKDREIFRGKALVGMKKTLVFYTGRAPRGGKTGWVMHEYRIHGKHAAAN 137

Query: 1133 AKAKVKW 1153
            +K   +W
Sbjct: 138  SKQDQEW 144


>emb|CBI19647.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = +2

Query: 929  HYSNSEDPKAAESGYWKATGECRRIFTNSSIIGSRSTLEFYTGQAPNGMETYWIMQYCRT 1108
            + ++SED K AE G+WK  GE   IF+NSSI G R+T EFY G  P+ ++T W++Q  + 
Sbjct: 31   YLTSSEDTKFAE-GFWKPKGEPYEIFSNSSITGWRTTFEFYEGTTPHVLKTDWVLQQYKI 89

Query: 1109 DQKGHSEIAK 1138
             QKG S+  K
Sbjct: 90   TQKGQSKNIK 99


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