BLASTX nr result

ID: Coptis25_contig00001106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001106
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20978.3| unnamed protein product [Vitis vinifera]              552   e-155
ref|XP_002527331.1| ATP-binding cassette transporter, putative [...   551   e-155
emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]   550   e-154
ref|XP_002527332.1| ATP-binding cassette transporter, putative [...   550   e-154
ref|XP_002527330.1| ATP-binding cassette transporter, putative [...   546   e-153

>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  552 bits (1423), Expect = e-155
 Identities = 258/359 (71%), Positives = 303/359 (84%)
 Frame = +1

Query: 1    SDGQIVYQGPRENVLEFFGLMGFQCPDRKGVADFLQEVTSKKDQKQYWVRKDEPYTFVPS 180
            SDGQIVYQGPRENVLEFF  MGF+CP+RKGVADFLQEVTSKKDQ+QYW  + EPY+FV  
Sbjct: 398  SDGQIVYQGPRENVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWAHRGEPYSFVTV 457

Query: 181  KEFAEAFQSFHIGRKVGDELAIPFDKSKSHPAALTTKKFGVNKKELLKACIAREYLRMKR 360
             EF+EAFQSFH+GR++GDELAIPFDK+K+H AALTTKK+GV+KKELLKACI+RE L MKR
Sbjct: 458  TEFSEAFQSFHVGRRLGDELAIPFDKAKAHTAALTTKKYGVSKKELLKACISRELLLMKR 517

Query: 361  NSFVYIFKLT*LTIMAFNASTLFLCTEMSCDDVADGGIYMGALFYTLLIIMFNGFSELNM 540
            NSFVYIFK++ L ++AF   TLFL T+M    +ADG I++G++F+TL++IMFNGFSEL +
Sbjct: 518  NSFVYIFKMSQLILLAFIMMTLFLRTDMPRKTIADGWIFLGSMFFTLMMIMFNGFSELAL 577

Query: 541  TIAKLPVFYKQRDLLFYPSWAYSLPTWVLKIPITFVEVAVWVFFTYYVIGYDPNVERLLR 720
            TI KLPVFYKQRDLLFYPSWAYSLPTW+LKIPIT VEVA+WVF TYYV+G+DPN+ER  R
Sbjct: 578  TIMKLPVFYKQRDLLFYPSWAYSLPTWILKIPITLVEVAIWVFMTYYVVGFDPNIERFFR 637

Query: 721  QYFLLLFVNQVASGLFRFIAAIGRNMIVANTXXXXXXXXXXXXXXXXXSRDNVKKWWIWG 900
            QY LLL VNQ+ASGL R +AA+GRN+IVANT                 S+D+VK WW+WG
Sbjct: 638  QYLLLLCVNQMASGLLRLMAALGRNIIVANTFGSFALLAVLVMGGFVLSKDDVKPWWMWG 697

Query: 901  YWISPLMYGQNALVVNEFLGKQWRHIPVNATEPLGVLVIKSRGFFPHAQWYWIGVGALI 1077
            YWISP+MYGQNA+ VNEFLGK WRH+P NATEPLGVLV+KSRG FP A WYW+GVGALI
Sbjct: 698  YWISPMMYGQNAIAVNEFLGKSWRHVPENATEPLGVLVLKSRGIFPEAYWYWLGVGALI 756


>ref|XP_002527331.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533331|gb|EEF35083.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1359

 Score =  551 bits (1421), Expect = e-155
 Identities = 258/357 (72%), Positives = 300/357 (84%), Gaps = 2/357 (0%)
 Frame = +1

Query: 10   QIVYQGPRENVLEFFGLMGFQCPDRKGVADFLQEVTSKKDQKQYWVRKDEPYTFVPSKEF 189
            +IVYQGPRE+VLEFF  MGF+CP+RKGVADFLQEVTSK DQKQYWV+KD+PY+F+  +EF
Sbjct: 321  RIVYQGPREHVLEFFDYMGFKCPERKGVADFLQEVTSKNDQKQYWVQKDQPYSFITVQEF 380

Query: 190  AEAFQSFHIGRKVGDELAIPFDKSKSHPAALTTKKFGVNKKELLKACIAREYLRMKRNSF 369
            AEAFQS+ +GRK+G EL+ PFDKSKSHPAAL TKK+GV+K EL KAC +REYL MKRNSF
Sbjct: 381  AEAFQSYDVGRKIGQELSTPFDKSKSHPAALATKKYGVDKMELFKACFSREYLLMKRNSF 440

Query: 370  VYIFKLT*LTIMAFNASTLFLCTEMSCDDVADGGIYMGALFYTLLIIMFNGFSELNMTIA 549
            VYIFKLT L +MA  + TLFL TEM  +D+ D G+Y+GALF+TL++IMFNG +EL+MTIA
Sbjct: 441  VYIFKLTQLVVMAIISMTLFLRTEMHREDLTDAGVYLGALFFTLVMIMFNGMAELSMTIA 500

Query: 550  KLPVFYKQRDLLFYPSWAYSLPTWVLKIPITFVEVAVWVFFTYYVIGYDPNVERLLRQYF 729
            KLPVFYKQRDLLFYP WA++LPTW+LKIPITF EV VWVF TYYVIG+DPNVERL +QYF
Sbjct: 501  KLPVFYKQRDLLFYPPWAFALPTWILKIPITFFEVGVWVFITYYVIGFDPNVERLFKQYF 560

Query: 730  LLLFVNQVASGLFRFIAAIGRNMIVANTXXXXXXXXXXXXXXXXXSRDNVKKWWIWGYWI 909
            LLL VNQ+ASGLFRFIAA+GRNMIVANT                 SRD++KKWWIWGYWI
Sbjct: 561  LLLIVNQMASGLFRFIAAVGRNMIVANTFGSFALLTVFALGGIVLSRDDIKKWWIWGYWI 620

Query: 910  SPLMYGQNALVVNEFLGKQWRHIPVN--ATEPLGVLVIKSRGFFPHAQWYWIGVGAL 1074
            SP+MYGQNALV NEFLG+ W H+P N  +T+ LGV  IKSRGFFPHA WYWIG+GAL
Sbjct: 621  SPMMYGQNALVANEFLGESWNHVPANSTSTDSLGVQFIKSRGFFPHAYWYWIGIGAL 677


>emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]
          Length = 1441

 Score =  550 bits (1417), Expect = e-154
 Identities = 257/359 (71%), Positives = 302/359 (84%)
 Frame = +1

Query: 1    SDGQIVYQGPRENVLEFFGLMGFQCPDRKGVADFLQEVTSKKDQKQYWVRKDEPYTFVPS 180
            SDGQIVYQGPRENVLEFF  MGF+CP+RKGVADFLQEVTSKKDQ+QYW  + EPY+FV  
Sbjct: 398  SDGQIVYQGPRENVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWAHRGEPYSFVTV 457

Query: 181  KEFAEAFQSFHIGRKVGDELAIPFDKSKSHPAALTTKKFGVNKKELLKACIAREYLRMKR 360
             EF+EAFQSFH+GR++GDELAIPFDK+K+H AALTTKK+GV+K ELLKACI+RE L MKR
Sbjct: 458  TEFSEAFQSFHVGRRLGDELAIPFDKAKAHTAALTTKKYGVSKXELLKACISRELLLMKR 517

Query: 361  NSFVYIFKLT*LTIMAFNASTLFLCTEMSCDDVADGGIYMGALFYTLLIIMFNGFSELNM 540
            NSFVYIFK++ L ++AF   TLFL T+M    +ADG I++G++F+TL++IMFNGFSEL +
Sbjct: 518  NSFVYIFKMSQLILLAFIMMTLFLRTDMPRKTIADGWIFLGSMFFTLMMIMFNGFSELAL 577

Query: 541  TIAKLPVFYKQRDLLFYPSWAYSLPTWVLKIPITFVEVAVWVFFTYYVIGYDPNVERLLR 720
            TI KLPVFYKQRDLLFYPSWAYSLPTW+LKIPIT VEVA+WVF TYYV+G+DPN+ER  R
Sbjct: 578  TIMKLPVFYKQRDLLFYPSWAYSLPTWILKIPITLVEVAIWVFMTYYVVGFDPNIERFFR 637

Query: 721  QYFLLLFVNQVASGLFRFIAAIGRNMIVANTXXXXXXXXXXXXXXXXXSRDNVKKWWIWG 900
            QY LLL VNQ+ASGL R +AA+GRN+IVANT                 S+D+VK WW+WG
Sbjct: 638  QYLLLLCVNQMASGLLRLMAALGRNIIVANTFGSFALLAVLVMGGFVLSKDDVKPWWMWG 697

Query: 901  YWISPLMYGQNALVVNEFLGKQWRHIPVNATEPLGVLVIKSRGFFPHAQWYWIGVGALI 1077
            YWISP+MYGQNA+ VNEFLGK WRH+P NATEPLGVLV+KSRG FP A WYW+GVGALI
Sbjct: 698  YWISPMMYGQNAIAVNEFLGKSWRHVPENATEPLGVLVLKSRGIFPEAYWYWLGVGALI 756


>ref|XP_002527332.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533332|gb|EEF35084.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1443

 Score =  550 bits (1416), Expect = e-154
 Identities = 259/360 (71%), Positives = 299/360 (83%), Gaps = 2/360 (0%)
 Frame = +1

Query: 1    SDGQIVYQGPRENVLEFFGLMGFQCPDRKGVADFLQEVTSKKDQKQYWVRKDEPYTFVPS 180
            SDGQIVYQGPRE+VLEFF  MGF+CP+RKGVADFLQEVTSK DQKQYWV+KD+PY+FV  
Sbjct: 402  SDGQIVYQGPREHVLEFFEYMGFKCPERKGVADFLQEVTSKNDQKQYWVQKDQPYSFVTV 461

Query: 181  KEFAEAFQSFHIGRKVGDELAIPFDKSKSHPAALTTKKFGVNKKELLKACIAREYLRMKR 360
            +EF+EAFQS+ +G+ +G EL+ PFDKSKSHPAAL  +K+GV+K ELLKAC AREYL MKR
Sbjct: 462  QEFSEAFQSYDVGQIIGQELSTPFDKSKSHPAALAARKYGVDKMELLKACFAREYLLMKR 521

Query: 361  NSFVYIFKLT*LTIMAFNASTLFLCTEMSCDDVADGGIYMGALFYTLLIIMFNGFSELNM 540
            NSFVYIFKLT L +MA  + TLFL TEM  +D+ D G+Y+GALF++L+ IMFNG SEL+M
Sbjct: 522  NSFVYIFKLTQLVVMAIISMTLFLRTEMHREDLTDAGVYLGALFFSLIAIMFNGMSELSM 581

Query: 541  TIAKLPVFYKQRDLLFYPSWAYSLPTWVLKIPITFVEVAVWVFFTYYVIGYDPNVERLLR 720
            TIAKLPVFYKQRDL FYP WAY+LPTW+LKIPITF EV VWVF TYYVIG+DPNVERL +
Sbjct: 582  TIAKLPVFYKQRDLQFYPPWAYALPTWILKIPITFFEVGVWVFITYYVIGFDPNVERLFK 641

Query: 721  QYFLLLFVNQVASGLFRFIAAIGRNMIVANTXXXXXXXXXXXXXXXXXSRDNVKKWWIWG 900
            QYFLLL VNQ+ASGLFRFIAA+GRNMIVANT                 SRD++KKWW WG
Sbjct: 642  QYFLLLIVNQMASGLFRFIAAVGRNMIVANTFGSFALLTVFALGGIVLSRDDIKKWWTWG 701

Query: 901  YWISPLMYGQNALVVNEFLGKQWRHIPVN--ATEPLGVLVIKSRGFFPHAQWYWIGVGAL 1074
            YWISP+MYGQNALV NEFLG+ W H+P N  +T+ LGV  IKSRGFFPHA WYWIG+GAL
Sbjct: 702  YWISPMMYGQNALVANEFLGESWNHVPANSTSTDSLGVQFIKSRGFFPHAYWYWIGIGAL 761


>ref|XP_002527330.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533330|gb|EEF35082.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1437

 Score =  546 bits (1408), Expect = e-153
 Identities = 255/359 (71%), Positives = 298/359 (83%)
 Frame = +1

Query: 1    SDGQIVYQGPRENVLEFFGLMGFQCPDRKGVADFLQEVTSKKDQKQYWVRKDEPYTFVPS 180
            SDGQIVYQGPRE VL+FF  MGF+CP+RKGVADFLQEVTS+KDQKQYW R+D+PY F+  
Sbjct: 399  SDGQIVYQGPREQVLDFFEYMGFRCPERKGVADFLQEVTSRKDQKQYWARRDQPYRFITV 458

Query: 181  KEFAEAFQSFHIGRKVGDELAIPFDKSKSHPAALTTKKFGVNKKELLKACIAREYLRMKR 360
            KEF+EA QS+ +GR++GDEL+IPFDKSKSHPAAL TKK+GV K+ELLKACI+RE+L MKR
Sbjct: 459  KEFSEALQSYEVGRRIGDELSIPFDKSKSHPAALATKKYGVGKRELLKACISREFLLMKR 518

Query: 361  NSFVYIFKLT*LTIMAFNASTLFLCTEMSCDDVADGGIYMGALFYTLLIIMFNGFSELNM 540
            NSF YIFKL+ L IMA  A TLFL TEM  + + DGG+Y+GALFYT+ IIMFNG +EL+M
Sbjct: 519  NSFFYIFKLSQLIIMATIAITLFLRTEMDRETLTDGGVYLGALFYTVTIIMFNGMAELSM 578

Query: 541  TIAKLPVFYKQRDLLFYPSWAYSLPTWVLKIPITFVEVAVWVFFTYYVIGYDPNVERLLR 720
            TIAKLPVFYKQRDLLFYP+W+YSLPTW+LKIP+TFVEV VWV   YY IG+DPN+ R  +
Sbjct: 579  TIAKLPVFYKQRDLLFYPAWSYSLPTWLLKIPVTFVEVGVWVCINYYAIGFDPNIGRFFK 638

Query: 721  QYFLLLFVNQVASGLFRFIAAIGRNMIVANTXXXXXXXXXXXXXXXXXSRDNVKKWWIWG 900
            QY LLLFVNQ+ASGLFRFIAA GRNMIVANT                 SR+ +KKWWIW 
Sbjct: 639  QYLLLLFVNQMASGLFRFIAAAGRNMIVANTFGSFALLTLFALGGFVLSREEIKKWWIWA 698

Query: 901  YWISPLMYGQNALVVNEFLGKQWRHIPVNATEPLGVLVIKSRGFFPHAQWYWIGVGALI 1077
            YW+SPLMYGQNA+VVNEFLG  W HIP N+TE LGV ++KSRGF+P+A WYWIG+GALI
Sbjct: 699  YWLSPLMYGQNAIVVNEFLGNSWSHIPPNSTESLGVQLLKSRGFYPYAYWYWIGLGALI 757


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