BLASTX nr result

ID: Coptis25_contig00001105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001105
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Viti...   120   1e-25
ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycin...   117   1e-24
ref|NP_001238400.1| uncharacterized protein LOC100306153 [Glycin...   117   1e-24
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...   116   3e-24
ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...   116   3e-24

>ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
           gi|147863559|emb|CAN84039.1| hypothetical protein
           VITISV_024169 [Vitis vinifera]
           gi|297743118|emb|CBI35985.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/77 (79%), Positives = 67/77 (87%)
 Frame = +2

Query: 2   KTKKQNQPGKLKHKSVMNKEFYRMAKAVSNQVGENHYRPDLKNAALARLSAVYRSLKVSK 181
           KTKKQN+PG L HKS M KEF RMAKAVSNQVG+N+YRPDLK AALARLSAV+RSLKV+K
Sbjct: 73  KTKKQNKPGSLLHKSAMKKEFRRMAKAVSNQVGDNYYRPDLKKAALARLSAVHRSLKVAK 132

Query: 182 SGAKKRNRQNVRIPGRK 232
           SG KKRNRQ V+  GRK
Sbjct: 133 SGVKKRNRQAVKSCGRK 149


>ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycine max]
           gi|255627703|gb|ACU14196.1| unknown [Glycine max]
          Length = 150

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   KTKKQNQPGKLKHKSVMNKEFYRMAKAVSNQVGENHYRPDLKNAALARLSAVYRSLKVSK 181
           KTKKQN+P  L HKSVM KEF RMAKAV NQV EN+YRPDLK AALARLSAV+RSLKV+K
Sbjct: 74  KTKKQNKPAALLHKSVMKKEFRRMAKAVENQVAENYYRPDLKKAALARLSAVHRSLKVAK 133

Query: 182 SGAKKRNRQNVRIPGRK 232
           SG KKRNRQ V++  RK
Sbjct: 134 SGVKKRNRQAVKVASRK 150


>ref|NP_001238400.1| uncharacterized protein LOC100306153 [Glycine max]
           gi|255627699|gb|ACU14194.1| unknown [Glycine max]
          Length = 150

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/77 (76%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   KTKKQNQPGKLKHKSVMNKEFYRMAKAVSNQVGENHYRPDLKNAALARLSAVYRSLKVSK 181
           KTKKQN+P  L HKSVM KEF  MAKAV NQV +N+YRPDLK AALARLSAV+RSLKV+K
Sbjct: 74  KTKKQNKPAALLHKSVMKKEFRGMAKAVENQVAKNYYRPDLKKAALARLSAVHRSLKVAK 133

Query: 182 SGAKKRNRQNVRIPGRK 232
           SG KKRNRQ VR+ GRK
Sbjct: 134 SGVKKRNRQGVRVAGRK 150


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/77 (75%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   KTKKQNQPGKLKHKSVMNKEFYRMAKAVSNQVGENHYRPDLKNAALARLSAVYRSLKVSK 181
           KTKKQN+P  L HKSVM KEF RMAKAV NQV +N+YRPDLK AALARLSAV RSL+V+K
Sbjct: 74  KTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALARLSAVNRSLRVAK 133

Query: 182 SGAKKRNRQNVRIPGRK 232
           SG KKRNRQ V++P RK
Sbjct: 134 SGVKKRNRQAVKVPSRK 150


>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/77 (75%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   KTKKQNQPGKLKHKSVMNKEFYRMAKAVSNQVGENHYRPDLKNAALARLSAVYRSLKVSK 181
           KTKKQN+P  L HKSVM KEF RMAKAV NQV +N+YRPDLK AALARLSAV RSL+V+K
Sbjct: 74  KTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAK 133

Query: 182 SGAKKRNRQNVRIPGRK 232
           SG KKRNRQ V++P RK
Sbjct: 134 SGVKKRNRQAVKVPSRK 150