BLASTX nr result

ID: Coptis25_contig00001096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001096
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...    87   4e-15
emb|CBI30029.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...    67   7e-09

>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 54/141 (38%), Positives = 74/141 (52%)
 Frame = -2

Query: 881  LDWASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKL 702
            L WASSAF + D I+ R   K QSLGK+K  + D VK  + KL R        Q+ + + 
Sbjct: 1892 LGWASSAFPAND-IKLRPGPKPQSLGKHKPSLPDTVKPPRSKLKRTLEHGEIHQYLLAEP 1950

Query: 701  TFPSPKQLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHHY 522
             F SP  + P D  +KFD  L   ++  G  +                ++   EAVPH+Y
Sbjct: 1951 VFQSPHAVSPRDPNLKFD--LTPAVLQDGWTNDTYGYSISCFDNELSLEIGSLEAVPHNY 2008

Query: 521  DPDFICGLEDCTILPDFTDIG 459
             PD I GL+DC++LP+FTDIG
Sbjct: 2009 VPDLISGLDDCSLLPEFTDIG 2029


>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = -2

Query: 881  LDWASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKL 702
            LDWASSAF + D I+ RS  K  SLGK+K   SD ++ SK K  ++  +PSE  H I   
Sbjct: 1566 LDWASSAFPTSD-IKPRSAIKSHSLGKHKICTSDSIRPSKSKFKKVAVEPSEMHHLILS- 1623

Query: 701  TFPSPK-QLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHH 525
              P PK  +   D+  +FD        LG      +       +E    + +  E   HH
Sbjct: 1624 --PLPKPTVAFNDSNPRFD--------LGSPVSLDAGISTPSFNEELCWEPESLELFSHH 1673

Query: 524  YDPDFICGLEDCTILPDFTDIG 459
            Y P+ I  L+D ++LP++ DIG
Sbjct: 1674 YSPNLISDLDDFSLLPEYIDIG 1695


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 49/138 (35%), Positives = 68/138 (49%)
 Frame = -2

Query: 875  WASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKLTF 696
            WASSAF + D  RSR+ S+ QS GK K+ MSD  K S+ K  +    PSE  H      F
Sbjct: 1910 WASSAFPTND-ARSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMDPSEMHHHQADSKF 1968

Query: 695  PSPKQLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHHYDP 516
             S     P+   ++ D + L    + G D  GS    +   E  + +M+    +PH Y  
Sbjct: 1969 QSM----PSLKDLRIDLTSLTTDEV-GIDSMGSIFSFDLNGESSL-EMESVGMIPHDYVA 2022

Query: 515  DFICGLEDCTILPDFTDI 462
              I  L+DCT  P++TDI
Sbjct: 2023 GLISDLDDCTAFPEYTDI 2040


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