BLASTX nr result
ID: Coptis25_contig00001096
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001096 (882 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223... 87 4e-15 emb|CBI30029.3| unnamed protein product [Vitis vinifera] 75 2e-11 ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794... 67 7e-09 >ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis] Length = 2029 Score = 87.4 bits (215), Expect = 4e-15 Identities = 54/141 (38%), Positives = 74/141 (52%) Frame = -2 Query: 881 LDWASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKL 702 L WASSAF + D I+ R K QSLGK+K + D VK + KL R Q+ + + Sbjct: 1892 LGWASSAFPAND-IKLRPGPKPQSLGKHKPSLPDTVKPPRSKLKRTLEHGEIHQYLLAEP 1950 Query: 701 TFPSPKQLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHHY 522 F SP + P D +KFD L ++ G + ++ EAVPH+Y Sbjct: 1951 VFQSPHAVSPRDPNLKFD--LTPAVLQDGWTNDTYGYSISCFDNELSLEIGSLEAVPHNY 2008 Query: 521 DPDFICGLEDCTILPDFTDIG 459 PD I GL+DC++LP+FTDIG Sbjct: 2009 VPDLISGLDDCSLLPEFTDIG 2029 >emb|CBI30029.3| unnamed protein product [Vitis vinifera] Length = 1695 Score = 75.5 bits (184), Expect = 2e-11 Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 1/142 (0%) Frame = -2 Query: 881 LDWASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKL 702 LDWASSAF + D I+ RS K SLGK+K SD ++ SK K ++ +PSE H I Sbjct: 1566 LDWASSAFPTSD-IKPRSAIKSHSLGKHKICTSDSIRPSKSKFKKVAVEPSEMHHLILS- 1623 Query: 701 TFPSPK-QLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHH 525 P PK + D+ +FD LG + +E + + E HH Sbjct: 1624 --PLPKPTVAFNDSNPRFD--------LGSPVSLDAGISTPSFNEELCWEPESLELFSHH 1673 Query: 524 YDPDFICGLEDCTILPDFTDIG 459 Y P+ I L+D ++LP++ DIG Sbjct: 1674 YSPNLISDLDDFSLLPEYIDIG 1695 >ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max] Length = 2041 Score = 66.6 bits (161), Expect = 7e-09 Identities = 49/138 (35%), Positives = 68/138 (49%) Frame = -2 Query: 875 WASSAFSSGDFIRSRSVSKQQSLGKNKAPMSDPVKSSKIKLLRIGTQPSEEQHPICKLTF 696 WASSAF + D RSR+ S+ QS GK K+ MSD K S+ K + PSE H F Sbjct: 1910 WASSAFPTND-ARSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMDPSEMHHHQADSKF 1968 Query: 695 PSPKQLGPTDAIVKFDRSLLNGLVLGGTDDKGSSKHHERMSEGFMPDMDIFEAVPHHYDP 516 S P+ ++ D + L + G D GS + E + +M+ +PH Y Sbjct: 1969 QSM----PSLKDLRIDLTSLTTDEV-GIDSMGSIFSFDLNGESSL-EMESVGMIPHDYVA 2022 Query: 515 DFICGLEDCTILPDFTDI 462 I L+DCT P++TDI Sbjct: 2023 GLISDLDDCTAFPEYTDI 2040