BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001095
         (1713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   439   e-121
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   439   e-121
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   437   e-120
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   436   e-120
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   435   e-119

>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  439 bits (1130), Expect = e-121
 Identities = 212/232 (91%), Positives = 222/232 (95%), Gaps = 6/232 (2%)
 Frame = +3

Query: 1035 GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 1196
            GKA+K+GP+ASE+LGEGR+TMRKT GKP      + WYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15   GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 1197 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 1376
            FPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 1377 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1556
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1557 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 1712
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
            AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
            Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
            binding protein precursor [Spinacia oleracea]
            gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
            binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  439 bits (1130), Expect = e-121
 Identities = 213/232 (91%), Positives = 222/232 (95%), Gaps = 6/232 (2%)
 Frame = +3

Query: 1035 GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 1196
            GKAVK+GP+ASE++GEGRITMRKT GKP      + WYGPDRVKYLGPFSGESPSYLTGE
Sbjct: 15   GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 1197 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 1376
            FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 1377 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1556
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1557 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 1712
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
            oleracea]
          Length = 267

 Score =  437 bits (1124), Expect = e-120
 Identities = 211/232 (90%), Positives = 221/232 (95%), Gaps = 6/232 (2%)
 Frame = +3

Query: 1035 GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 1196
            GKA+K+GP+ASE+L EGR+TMRKT GKP      + WYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15   GKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 1197 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 1376
            FPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 1377 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1556
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1557 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 1712
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
            cathayensis]
          Length = 267

 Score =  436 bits (1121), Expect = e-120
 Identities = 210/232 (90%), Positives = 221/232 (95%), Gaps = 6/232 (2%)
 Frame = +3

Query: 1035 GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 1196
            G+A+K+ PS+S+LLGEGR+TMRKT G+P      + WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15   GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 1197 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 1376
            FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 1377 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1556
            AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGG
Sbjct: 135  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGG 194

Query: 1557 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 1712
            SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 195  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
            [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
            PREDICTED: chlorophyll a-b binding protein,
            chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  435 bits (1118), Expect = e-119
 Identities = 210/232 (90%), Positives = 220/232 (94%), Gaps = 6/232 (2%)
 Frame = +3

Query: 1035 GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 1196
            G+AVK+ P+AS+LLGEGRITMRKT GKP      + WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15   GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 1197 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 1376
            FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 1377 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1556
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGG 194

Query: 1557 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 1712
            SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 195  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246