BLASTX nr result
ID: Coptis25_contig00001079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001079 (328 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319951.1| predicted protein [Populus trichocarpa] gi|2... 42 6e-07 ref|XP_002276175.1| PREDICTED: fasciclin-like arabinogalactan pr... 43 1e-06 >ref|XP_002319951.1| predicted protein [Populus trichocarpa] gi|222858327|gb|EEE95874.1| predicted protein [Populus trichocarpa] Length = 353 Score = 42.0 bits (97), Expect(2) = 6e-07 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +1 Query: 178 LGINGVQITAPDILSSKEFVIHGISR 255 L INGV+I AP+I SSKEF++HGI++ Sbjct: 316 LAINGVEIAAPEIFSSKEFIVHGITQ 341 Score = 36.2 bits (82), Expect(2) = 6e-07 Identities = 16/27 (59%), Positives = 22/27 (81%) Frame = +2 Query: 62 SHSPMLERLVRLYILPERYEYRELVSM 142 S SPMLE++VRL+ILP+R Y EL ++ Sbjct: 263 SSSPMLEKIVRLHILPQRATYIELAAL 289 >ref|XP_002276175.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Vitis vinifera] Length = 354 Score = 42.7 bits (99), Expect(2) = 1e-06 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = +1 Query: 163 NAKGVLGINGVQITAPDILSSKEFVIHGISR 255 N+ VL INGV I APD+ SSK+F+IH ISR Sbjct: 313 NSSQVLVINGVDIVAPDVFSSKKFIIHVISR 343 Score = 34.3 bits (77), Expect(2) = 1e-06 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +2 Query: 62 SHSPMLERLVRLYILPERYEYRELVSM 142 S SP+L+R+VR +ILP R Y EL S+ Sbjct: 264 SPSPLLDRIVRFHILPRRLSYIELASL 290