BLASTX nr result

ID: Coptis25_contig00001058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001058
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58620.1| unknown gene [Vitis vinifera]                         151   1e-34
ref|XP_002264938.1| PREDICTED: uncharacterized protein LOC100248...   150   3e-34
emb|CAN63322.1| hypothetical protein VITISV_022239 [Vitis vinifera]   150   3e-34
ref|XP_003623667.1| hypothetical protein MTR_7g074250 [Medicago ...   144   2e-32
ref|XP_002323693.1| predicted protein [Populus trichocarpa] gi|2...   142   9e-32

>emb|CAQ58620.1| unknown gene [Vitis vinifera]
          Length = 215

 Score =  151 bits (382), Expect = 1e-34
 Identities = 79/195 (40%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
 Frame = -3

Query: 667 KKPRNNRRRCCLITTATIL---LSQXXXXXXXXXXXFKVKDPTTTLVSTTISGVSPRVDL 497
           K  R+ RRR CLI    ++   +             FK K P T LVS T+ G+SPR+  
Sbjct: 20  KNRRHVRRRRCLIAIGVVIFLIMLLFIVLLILVLTVFKAKQPKTQLVSATLDGISPRISF 79

Query: 496 PTLKVEMNITLDLKLSVHNPNHYSFKHGTGYSQVYYQNDEVANVDIAPGNIGEKESSGID 317
           P +++++NITL+L++ V NPNH SFKHG+G S + YQ  +V +V+I PGNI  + S+ I 
Sbjct: 80  PVVRIQLNITLNLQILVENPNHASFKHGSGQSILLYQGGQVGDVEIYPGNIPGRRSTTIP 139

Query: 316 ATVIVAAQNFTSNTSGLISDVMAGTMSFDVETRLPGRVKVL-FIKKHVVTISTCHLDVQL 140
           + + +      S T  L+ D++AG ++ D  TR+PGRV  L  I+KHVV IS CH  + +
Sbjct: 140 SRLTLQVDMVASETLHLVQDILAGQLAMDTRTRIPGRVTFLGLIRKHVVAISDCHFVIAV 199

Query: 139 TNLTVTSQVCKSKAK 95
             + V SQ CK + K
Sbjct: 200 PEMKVRSQECKERTK 214


>ref|XP_002264938.1| PREDICTED: uncharacterized protein LOC100248515 [Vitis vinifera]
           gi|296085821|emb|CBI31145.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score =  150 bits (380), Expect = 3e-34
 Identities = 78/195 (40%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
 Frame = -3

Query: 667 KKPRNNRRRCCLITTATIL---LSQXXXXXXXXXXXFKVKDPTTTLVSTTISGVSPRVDL 497
           K  R+ RR  CLI    ++   +             FK K P T LVS T+ G+SPR+  
Sbjct: 20  KNRRHVRRHRCLIAIGFVIFLIMLLFIVLLILVLTVFKAKQPKTQLVSATLDGISPRISF 79

Query: 496 PTLKVEMNITLDLKLSVHNPNHYSFKHGTGYSQVYYQNDEVANVDIAPGNIGEKESSGID 317
           P +++++NITL+L++ V NPNH SFKHG+G S + YQ ++V +V+I PGNI  + S+ I 
Sbjct: 80  PVVRIQLNITLNLQILVENPNHASFKHGSGQSILLYQGEQVGDVEIYPGNIPGRRSTTIP 139

Query: 316 ATVIVAAQNFTSNTSGLISDVMAGTMSFDVETRLPGRVKVL-FIKKHVVTISTCHLDVQL 140
           + + +      S T  L+ D++AG ++ D  TR+PGRV  L  I+KHVV IS CH  + +
Sbjct: 140 SRLTLQVDKVASETLHLVQDILAGQLAMDTRTRIPGRVTFLGLIRKHVVAISDCHFVIAV 199

Query: 139 TNLTVTSQVCKSKAK 95
             + V SQ CK + K
Sbjct: 200 PEMKVRSQECKERTK 214


>emb|CAN63322.1| hypothetical protein VITISV_022239 [Vitis vinifera]
          Length = 436

 Score =  150 bits (380), Expect = 3e-34
 Identities = 78/195 (40%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
 Frame = -3

Query: 667 KKPRNNRRRCCLITTATIL---LSQXXXXXXXXXXXFKVKDPTTTLVSTTISGVSPRVDL 497
           K  R+ RR  CLI    ++   +             FK K P T LVS T+ G+SPR+  
Sbjct: 241 KNRRHVRRXRCLIAIGXVIFLIMLLFIVLLILVLTVFKAKQPKTQLVSATLDGISPRISF 300

Query: 496 PTLKVEMNITLDLKLSVHNPNHYSFKHGTGYSQVYYQNDEVANVDIAPGNIGEKESSGID 317
           P +++++NITL+L++ V NPNH SFKHG+G S + YQ ++V +V+I PGNI  + S+ I 
Sbjct: 301 PVVRIQLNITLNLQILVENPNHASFKHGSGQSILLYQGEQVGDVEIYPGNIPGRRSTTIP 360

Query: 316 ATVIVAAQNFTSNTSGLISDVMAGTMSFDVETRLPGRVKVL-FIKKHVVTISTCHLDVQL 140
           + + +      S T  L+ D++AG ++ D  TR+PGRV  L  I+KHVV IS CH  + +
Sbjct: 361 SRLTLQVDKVASETLHLVQDILAGQLAMDTRTRIPGRVTFLGLIRKHVVAISDCHFVIAV 420

Query: 139 TNLTVTSQVCKSKAK 95
             + V SQ CK + K
Sbjct: 421 PEMKVRSQECKERTK 435



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 9/223 (4%)
 Frame = -3

Query: 733 MEEVSLKPK----TISDPMELEAAHDK--KPRNNRRR---CCLITTATILLSQXXXXXXX 581
           M +V+ KP     +  D +   +A  K  KP ++ RR      IT   +LL         
Sbjct: 1   MADVTSKPGNPLLSTMDGITTASAKSKSVKPSSSGRRLTKAICITVGIVLLVVVVVMVIL 60

Query: 580 XXXXFKVKDPTTTLVSTTISGVSPRVDLPTLKVEMNITLDLKLSVHNPNHYSFKHGTGYS 401
               FK KDP  T+ S ++  +    D     + +N +LD+ +SV NPN   F++    +
Sbjct: 61  GFTVFKAKDPVITVGSVSLKDL----DFSLTPLNINASLDVNVSVRNPNRVGFRYNNASA 116

Query: 400 QVYYQNDEVANVDIAPGNIGEKESSGIDATVIVAAQNFTSNTSGLISDVMAGTMSFDVET 221
            + Y    V    I  G IG ++++G++  + + A     N   L SDV++G++      
Sbjct: 117 LLNYDGSLVGEAPIPAGRIGARKTTGMNIVISLMADRLLLNPQ-LYSDVLSGSLPLSTYA 175

Query: 220 RLPGRVKVLFIKKHVVTISTCHLDVQLTNLTVTSQVCKSKAKL 92
           R+ G+V VLF+K  VV+ STC++ V + N T+   VC+ K KL
Sbjct: 176 RISGKVSVLFVKIKVVSTSTCNMTVDVKNGTLKDTVCQYKTKL 218


>ref|XP_003623667.1| hypothetical protein MTR_7g074250 [Medicago truncatula]
           gi|355498682|gb|AES79885.1| hypothetical protein
           MTR_7g074250 [Medicago truncatula]
          Length = 211

 Score =  144 bits (364), Expect = 2e-32
 Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
 Frame = -3

Query: 682 EAAHDKKPRNNRRRC--CLITTATILLSQXXXXXXXXXXXFKVKDPTTTLVSTTISGVSP 509
           E A    P+  R +C  C+     +LL             FK KDP T +VS T+ G+SP
Sbjct: 12  EQALMNPPKKGRNKCVTCICIVLLLLLVLVIVCVILAFTLFKPKDPKTKVVSATLEGISP 71

Query: 508 RVDLPTLKVEMNITLDLKLSVHNPNHYSFKHGTGYSQVYYQNDEVANVDIAPGNIGEKES 329
           R+  P + +++N+TL+LK+ V N NH SFKH  G S + Y+  EV + DI  G I  K S
Sbjct: 72  RLTFPAINIQLNVTLNLKIQVDNQNHASFKHADGTSLLMYKGVEVGDTDIYAGLIPAKGS 131

Query: 328 SGIDATVIVAAQNFTSNTSGLISDVMAGTMSFDVETRLPGRVKVL-FIKKHVVTISTCHL 152
           + +   + + A    SN +GL+ D+M G +S +  TR+PGRV  L FIKKH+V  S C  
Sbjct: 132 TILPCRLTLQADKLASNVTGLLGDLMGGQLSLEAVTRIPGRVTFLGFIKKHIVAKSNCQF 191

Query: 151 DVQLTNLTVTSQVCKSKAKL 92
                ++ + SQ+CK+KAKL
Sbjct: 192 VFGFPDMEIKSQICKNKAKL 211


>ref|XP_002323693.1| predicted protein [Populus trichocarpa] gi|222868323|gb|EEF05454.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  142 bits (358), Expect = 9e-32
 Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
 Frame = -3

Query: 658 RNNRRRCCLITTATILLSQXXXXXXXXXXXFKV---KDPTTTLVSTTISGVSPRVDLPTL 488
           R  + R C I    ILL Q             V   K P T L+S T+ G+SPR+ LP +
Sbjct: 9   RGPKARRCFIVGGVILLLQLLLFIIFLILVLTVFKPKAPQTQLLSATLEGISPRISLPVV 68

Query: 487 KVEMNITLDLKLSVHNPNHYSFKHGTGYSQVYYQNDEVANVDIAPGNIGEKESSGIDATV 308
            +++NITL+L L V NPNH SFKHG G S + Y+ DEV + D+ PG I  K +  + + +
Sbjct: 69  NIQLNITLNLTLLVKNPNHVSFKHGPGKSYLLYRGDEVGDADLYPGLIPSKGTETLPSRL 128

Query: 307 IVAAQNFTSNTSGLISDVMAGTMSFDVETRLPGRVKVL-FIKKHVVTISTCHLDVQLTNL 131
            +      ++ S LISDV+AG +  +  TR+PGR   L  IKKH V  S C   + + +L
Sbjct: 129 TIQVDQMAADMSALISDVLAGQIVLETRTRIPGRATFLKIIKKHAVATSECRFTIDIPSL 188

Query: 130 TVTSQVCKSKAK 95
            + SQ CK+K K
Sbjct: 189 KIQSQECKNKTK 200


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