BLASTX nr result

ID: Coptis25_contig00001050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001050
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523036.1| ATP synthase subunit d, putative [Ricinus co...   461   e-127
ref|XP_002282632.1| PREDICTED: V-type proton ATPase subunit D is...   455   e-126
ref|XP_002532689.1| ATP synthase subunit d, putative [Ricinus co...   454   e-125
ref|XP_004140139.1| PREDICTED: V-type proton ATPase subunit D-li...   444   e-122
ref|XP_002300100.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121

>ref|XP_002523036.1| ATP synthase subunit d, putative [Ricinus communis]
           gi|223537719|gb|EEF39340.1| ATP synthase subunit d,
           putative [Ricinus communis]
          Length = 261

 Score =  461 bits (1185), Expect = e-127
 Identities = 237/261 (90%), Positives = 253/261 (96%)
 Frame = +1

Query: 100 MSSQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 279
           MS Q QRLNVVPTVTML VVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQGQRLNVVPTVTMLAVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 280 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 459
           EIMK+SSFALTEAKYVAGEN+KH+VLENVH A+LKVRSRQENVAGVKLPKF+YFTEGETK
Sbjct: 61  EIMKSSSFALTEAKYVAGENVKHVVLENVHNASLKVRSRQENVAGVKLPKFDYFTEGETK 120

Query: 460 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 639
           NDLTGLARGGQQVQ CRAAYVK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 640 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLQKGI 819
           RLENTISYIKGELDELEREDFFRLKKIQGYKKRE+ERQLA+A+QFAEEQ AEK+SLQKGI
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEEQFAEKISLQKGI 240

Query: 820 SMNAAHNLLNDSMKKDEDIIF 882
           S+ +AHN+L+ +M+KDEDIIF
Sbjct: 241 SLKSAHNMLSAAMEKDEDIIF 261


>ref|XP_002282632.1| PREDICTED: V-type proton ATPase subunit D isoform 1 [Vitis
           vinifera] gi|359485322|ref|XP_003633257.1| PREDICTED:
           V-type proton ATPase subunit D isoform 2 [Vitis
           vinifera]
          Length = 261

 Score =  455 bits (1170), Expect = e-126
 Identities = 235/261 (90%), Positives = 251/261 (96%)
 Frame = +1

Query: 100 MSSQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 279
           MS Q+QRL VVPTVTMLGV+KARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQSQRLTVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 280 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 459
           E+MK SSFALTEAKYVAGENIKH+VLENV  A+LKVRSRQENVAGVKLPKFEYF EGETK
Sbjct: 61  EVMKASSFALTEAKYVAGENIKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFNEGETK 120

Query: 460 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 639
           NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLD+AIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKP 180

Query: 640 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLQKGI 819
           RLENTI YIKGELDELEREDFFRLKKIQGYKKRE+ERQ+ASA++F+E+Q A KVSLQKGI
Sbjct: 181 RLENTIIYIKGELDELEREDFFRLKKIQGYKKREMERQMASAKEFSEDQFAGKVSLQKGI 240

Query: 820 SMNAAHNLLNDSMKKDEDIIF 882
           S+NAAHNLL+ +M+KDEDIIF
Sbjct: 241 SLNAAHNLLSAAMEKDEDIIF 261


>ref|XP_002532689.1| ATP synthase subunit d, putative [Ricinus communis]
           gi|223527572|gb|EEF29689.1| ATP synthase subunit d,
           putative [Ricinus communis]
          Length = 261

 Score =  454 bits (1169), Expect = e-125
 Identities = 234/261 (89%), Positives = 250/261 (95%)
 Frame = +1

Query: 100 MSSQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 279
           MS Q QRLNVVPTVTML VVKARL+GATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGQGQRLNVVPTVTMLAVVKARLIGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 280 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 459
           EIMK SSFALTEAKYVAGEN+KH+VLENV  A+LKVRSRQENVAGVKLPKFEYFTE +TK
Sbjct: 61  EIMKASSFALTEAKYVAGENVKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTESDTK 120

Query: 460 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 639
           NDLTGLARGGQQVQ CRAAYVK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 640 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLQKGI 819
           RLENTISYIKGELDELEREDFFRLKKIQGYKKRE+ERQLA+A+QFAEEQ AEK+SLQKGI
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEEQFAEKISLQKGI 240

Query: 820 SMNAAHNLLNDSMKKDEDIIF 882
           S+ +AHN+L+ +M+KDEDIIF
Sbjct: 241 SLKSAHNMLSAAMEKDEDIIF 261


>ref|XP_004140139.1| PREDICTED: V-type proton ATPase subunit D-like [Cucumis sativus]
           gi|449481088|ref|XP_004156078.1| PREDICTED: V-type
           proton ATPase subunit D-like [Cucumis sativus]
          Length = 261

 Score =  444 bits (1142), Expect = e-122
 Identities = 224/261 (85%), Positives = 251/261 (96%)
 Frame = +1

Query: 100 MSSQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 279
           MS QTQRLNVVPTVTMLG +KARLVGATRGHALLKKKSDALTVQFRQILKKIVS KESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMG 60

Query: 280 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 459
           ++MKTS+F+LTEAKYVAG+NIKHIVLENV TA +K+RSRQEN+AGVKLPKFE++++GETK
Sbjct: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQTAAIKIRSRQENIAGVKLPKFEHYSDGETK 120

Query: 460 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 639
           NDLTGLARGGQQ+QLCR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 640 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLQKGI 819
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+RE+ERQ A+A+ FAEEQ+AEKVSLQKG+
Sbjct: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLFAEEQLAEKVSLQKGV 240

Query: 820 SMNAAHNLLNDSMKKDEDIIF 882
           S+++AHNLL+ + +KDEDIIF
Sbjct: 241 SISSAHNLLSAAAEKDEDIIF 261


>ref|XP_002300100.1| predicted protein [Populus trichocarpa] gi|222847358|gb|EEE84905.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  441 bits (1133), Expect = e-121
 Identities = 233/261 (89%), Positives = 247/261 (94%)
 Frame = +1

Query: 100 MSSQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 279
           MS   QRLNVVPTVT+LGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG
Sbjct: 1   MSGSGQRLNVVPTVTVLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 280 EIMKTSSFALTEAKYVAGENIKHIVLENVHTATLKVRSRQENVAGVKLPKFEYFTEGETK 459
           + MK SSFALTEAKYVAGENIKH VLENV TATLKVRSRQENVAGVKLPKF+YF EGETK
Sbjct: 61  DKMKASSFALTEAKYVAGENIKHTVLENVQTATLKVRSRQENVAGVKLPKFDYFHEGETK 120

Query: 460 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 639
           NDLTGLARGGQQVQ CRAAYVKAIEVLVELASLQTSF+TLD AIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQACRAAYVKAIEVLVELASLQTSFMTLDTAIKTTNRRVNALENVVKP 180

Query: 640 RLENTISYIKGELDELEREDFFRLKKIQGYKKRELERQLASAQQFAEEQVAEKVSLQKGI 819
           RLENTI+YIKGELDELEREDFFRLKKIQG+KKRE+ERQLA+A+QFAE QVAEKVSLQKGI
Sbjct: 181 RLENTITYIKGELDELEREDFFRLKKIQGFKKREIERQLAAAKQFAEGQVAEKVSLQKGI 240

Query: 820 SMNAAHNLLNDSMKKDEDIIF 882
           S+N+A N+L+ S +KDEDIIF
Sbjct: 241 SLNSAQNMLSAS-EKDEDIIF 260


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