BLASTX nr result

ID: Coptis25_contig00001048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001048
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01182.1| protein kinase-like protein [Arabidopsis thaliana]     55   8e-06
ref|XP_002876932.1| hypothetical protein ARALYDRAFT_484347 [Arab...    55   8e-06
ref|NP_001078208.1| serine/threonine-protein kinase PRP4 [Arabid...    55   8e-06
ref|NP_189213.2| serine/threonine-protein kinase PRP4 [Arabidops...    55   8e-06

>dbj|BAB01182.1| protein kinase-like protein [Arabidopsis thaliana]
          Length = 921

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 73  ILDLTYDHPMDIWSVGCCLYELYS 2
           IL LTYDHP+DIWSVGCCLYELYS
Sbjct: 780 ILGLTYDHPLDIWSVGCCLYELYS 803


>ref|XP_002876932.1| hypothetical protein ARALYDRAFT_484347 [Arabidopsis lyrata subsp.
           lyrata] gi|297322770|gb|EFH53191.1| hypothetical protein
           ARALYDRAFT_484347 [Arabidopsis lyrata subsp. lyrata]
          Length = 931

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -2

Query: 115 FLIKSAHTCVFVTTILDLTYDHPMDIWSVGCCLYELYS 2
           +L+   +    ++  L LTYDHP+DIWSVGCCLYELYS
Sbjct: 776 YLVSRFYRSPEISKYLGLTYDHPLDIWSVGCCLYELYS 813


>ref|NP_001078208.1| serine/threonine-protein kinase PRP4 [Arabidopsis thaliana]
           gi|332643556|gb|AEE77077.1| serine/threonine-protein
           kinase PRP4 [Arabidopsis thaliana]
          Length = 673

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 73  ILDLTYDHPMDIWSVGCCLYELYS 2
           IL LTYDHP+DIWSVGCCLYELYS
Sbjct: 532 ILGLTYDHPLDIWSVGCCLYELYS 555


>ref|NP_189213.2| serine/threonine-protein kinase PRP4 [Arabidopsis thaliana]
           gi|20260158|gb|AAM12977.1| protein kinase-like protein
           [Arabidopsis thaliana] gi|22136222|gb|AAM91189.1|
           protein kinase-like protein [Arabidopsis thaliana]
           gi|332643555|gb|AEE77076.1| serine/threonine-protein
           kinase PRP4 [Arabidopsis thaliana]
          Length = 935

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 73  ILDLTYDHPMDIWSVGCCLYELYS 2
           IL LTYDHP+DIWSVGCCLYELYS
Sbjct: 794 ILGLTYDHPLDIWSVGCCLYELYS 817


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