BLASTX nr result

ID: Coptis25_contig00001042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001042
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24713.3| unnamed protein product [Vitis vinifera]              481   e-133
ref|XP_002278433.2| PREDICTED: BTB/POZ and TAZ domain-containing...   468   e-129
ref|XP_002534409.1| protein binding protein, putative [Ricinus c...   457   e-126
ref|XP_002323915.1| hypothetical protein POPTRDRAFT_825456 [Popu...   455   e-125
ref|XP_002309738.1| hypothetical protein POPTRDRAFT_216196 [Popu...   444   e-122

>emb|CBI24713.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/399 (59%), Positives = 291/399 (72%), Gaps = 1/399 (0%)
 Frame = +1

Query: 103  MAQPELECNWGFATDESVKECFNLRMGEPNHADVRPVLGVSTSLGCND-NRXXXXXXXXX 279
            MA P+L  +   +T ES    FN+ + E + A+  PVL VS S  CN+ N          
Sbjct: 1    MASPDLVSSLPCSTGESFSGSFNIAIEETSPANFLPVLEVSNSSVCNNSNIPKPPPLPGK 60

Query: 280  ISSRSNYHKRFLVSSYVSRDFKDAWDRLFKEGYETDVHVVTEDKTXXXXXXXXXXXXXPV 459
              ++++Y KR    S V R+ KD WD+LFK+GY  D+H++TED               PV
Sbjct: 61   TYTKTSYPKRLANCSSVPRETKDTWDKLFKDGYGADIHIITEDGPIIPAHSCVLGVASPV 120

Query: 460  LRNFLKQAKLKDGIRYIEILGVPSRAVSVFIRFLYSASYEEDEMKNNAXXXXXXXXXXXX 639
            L NFL+ +K+K GIRYI+I GVP  A   FIRFLYS+S+EE+EMK               
Sbjct: 121  LGNFLQLSKVKKGIRYIKIPGVPCEAAYAFIRFLYSSSFEEEEMKKFVLHLLVLSHSYSV 180

Query: 640  XXXKRVCTNILEQTWLTTENVIDVLELARQCDAPRLSLICVRMVVKNFKKVSSSEGWKVM 819
               KR+C + LEQ W+T EN+IDVL+LAR+CDAPRLSLIC RM+VK+FK +SS++GWKVM
Sbjct: 181  PSLKRLCAHHLEQGWMTPENLIDVLQLARKCDAPRLSLICTRMIVKDFKTISSTQGWKVM 240

Query: 820  KRVNPELEQELLESIVEADSGYHENMRKNEEKKMYLQLHEAMEALLHICKDGCRTIGPRD 999
            KRV+P LEQELLE++VEADS   E ++K EEKK+YLQLHEAMEALLHIC+DGCRTIGPRD
Sbjct: 241  KRVDPALEQELLEAVVEADSRKEERLKKIEEKKVYLQLHEAMEALLHICRDGCRTIGPRD 300

Query: 1000 KVLKGSQITCSFPACKGLETLVRHFSICKVRVPGGCSHCKRMWQLLELHSRMCNEPATCK 1179
            KVLKGSQ+ C FPACKGLETLVRHFS CK RVPGGC HCKRMWQLLELHSRMC+EP  CK
Sbjct: 301  KVLKGSQVACGFPACKGLETLVRHFSSCKTRVPGGCVHCKRMWQLLELHSRMCSEPDCCK 360

Query: 1180 VPLCRHFKDKMQQQSKKDETKWRLLVSKVVAARSALKPW 1296
            VPLCRHFK+KMQQQSKKDETKW+LLVSKV+A +++L P+
Sbjct: 361  VPLCRHFKEKMQQQSKKDETKWKLLVSKVIAVKNSLGPF 399


>ref|XP_002278433.2| PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Vitis
            vinifera]
          Length = 410

 Score =  468 bits (1205), Expect = e-129
 Identities = 235/402 (58%), Positives = 287/402 (71%), Gaps = 4/402 (0%)
 Frame = +1

Query: 103  MAQPELECNWGFATDESVKECFNLRMGEPNHADVRPVLGVSTSLGCND-NRXXXXXXXXX 279
            MA P+L  +   +T ES    FN+ + E + A+  PVL VS S  CN+ N          
Sbjct: 1    MASPDLVSSLPCSTGESFSGSFNIAIEETSPANFLPVLEVSNSSVCNNSNIPKPPPLPGK 60

Query: 280  ISSRSNYHKRFLVSSYVSRDFKDAWDRLFKEGYETDVHVVTEDKTXXXXXXXXXXXXXPV 459
              ++++Y KR    S V R+ KD WD+LFK+GY  D+H++TED               PV
Sbjct: 61   TYTKTSYPKRLANCSSVPRETKDTWDKLFKDGYGADIHIITEDGPIIPAHSCVLGVASPV 120

Query: 460  LRNFLKQAKLKDGIRYIEILGVPSRAVSVFIRFLYSASYEEDEMKNNAXXXXXXXXXXXX 639
            L NFL+ +K+K GIRYI+I GVP  A   FIRFLYS+S+EE+EMK               
Sbjct: 121  LGNFLQLSKVKKGIRYIKIPGVPCEAAYAFIRFLYSSSFEEEEMKKFVLHLLVLSHSYSV 180

Query: 640  XXXKRVCTNILEQTWLTTENVIDVLELARQCDAPRLSLICVRMVVKNFKKVSSSEGWKVM 819
               KR+C + LEQ W+T EN+IDVL+LAR+CDAPRLSLIC RM+VK+FK +SS++GWKVM
Sbjct: 181  PSLKRLCAHHLEQGWMTPENLIDVLQLARKCDAPRLSLICTRMIVKDFKTISSTQGWKVM 240

Query: 820  KRVNPELEQELLESIVEADSGYH---ENMRKNEEKKMYLQLHEAMEALLHICKDGCRTIG 990
            KRV+P LEQELLE+     S +    E ++K EEKK+YLQLHEAMEALLHIC+DGCRTIG
Sbjct: 241  KRVDPALEQELLEAYDNISSSFQRKEERLKKIEEKKVYLQLHEAMEALLHICRDGCRTIG 300

Query: 991  PRDKVLKGSQITCSFPACKGLETLVRHFSICKVRVPGGCSHCKRMWQLLELHSRMCNEPA 1170
            PRDKVLKGSQ+ C FPACKGLETLVRHFS CK RVPGGC HCKRMWQLLELHSRMC+EP 
Sbjct: 301  PRDKVLKGSQVACGFPACKGLETLVRHFSSCKTRVPGGCVHCKRMWQLLELHSRMCSEPD 360

Query: 1171 TCKVPLCRHFKDKMQQQSKKDETKWRLLVSKVVAARSALKPW 1296
             CKVPLCRHFK+KMQQQSKKDETKW+LLVSKV+A +++L P+
Sbjct: 361  CCKVPLCRHFKEKMQQQSKKDETKWKLLVSKVIAVKNSLGPF 402


>ref|XP_002534409.1| protein binding protein, putative [Ricinus communis]
            gi|223525356|gb|EEF27978.1| protein binding protein,
            putative [Ricinus communis]
          Length = 414

 Score =  457 bits (1177), Expect = e-126
 Identities = 234/405 (57%), Positives = 282/405 (69%), Gaps = 8/405 (1%)
 Frame = +1

Query: 103  MAQPELECNWGFATDESVKECFNLRMGEPNHADVRPVLGVST-SLGCNDNRXXXXXXXXX 279
            MA  +L+ +W  A  ESV  CFN+ M E N A++  V    T S+  ++           
Sbjct: 1    MASADLDSSWLSAAGESVGGCFNIHMVEVNSAEILCVQDSPTASVSYSNTIPKPPPVPDK 60

Query: 280  ISSRSNYHKRFLVSSYVSRDFKDAWDRLFKEGYETDVHVVTEDKTXXXXXXXXXXXXXPV 459
               R+N  K       V ++ +D WDRLFKEGY  DV+++T+ K+             PV
Sbjct: 61   TFCRANNSKSISQYCSVPKEIRDTWDRLFKEGYGADVYIITDSKSYIPAHFNVLSIASPV 120

Query: 460  LRNFLKQAKLKDGIRYIEILGVPSRAVSVFIRFLYSASYEEDEMKNNAXXXXXXXXXXXX 639
            L N L+Q+K+K+G+R+I+ILGVPS AV  FIRFLYS+ +EE+EMK               
Sbjct: 121  LWNLLQQSKVKNGVRFIKILGVPSEAVYAFIRFLYSSCFEEEEMKKFVLHLLVLSHSYSI 180

Query: 640  XXXKRVCTNILEQTWLTTENVIDVLELARQCDAPRLSLICVRMVVKNFKKVSSSEGWKVM 819
               K+VC   LEQ WLT ENVIDVL+LAR CDAPRLS ICVRMVVK+FK +SS+EGWKVM
Sbjct: 181  PSLKKVCVRHLEQGWLTKENVIDVLQLARNCDAPRLSFICVRMVVKDFKFISSTEGWKVM 240

Query: 820  KRVNPELEQELLESIVEADSGY-------HENMRKNEEKKMYLQLHEAMEALLHICKDGC 978
            KR NP LEQEL+E   + D G+        E +RK EEKK+YLQL+EAMEALLHICKDGC
Sbjct: 241  KRANPALEQELVE---KWDHGFTCSCQRKQERLRKMEEKKVYLQLYEAMEALLHICKDGC 297

Query: 979  RTIGPRDKVLKGSQITCSFPACKGLETLVRHFSICKVRVPGGCSHCKRMWQLLELHSRMC 1158
            RTIGPRDKVLKGSQ+TC+FPACKGLE LVRHFS CK RVPGGC HCKRMWQLLELHSR+C
Sbjct: 298  RTIGPRDKVLKGSQVTCNFPACKGLENLVRHFSNCKTRVPGGCVHCKRMWQLLELHSRLC 357

Query: 1159 NEPATCKVPLCRHFKDKMQQQSKKDETKWRLLVSKVVAARSALKP 1293
            NEP +CKVPLCRHFK+KMQQQ+KKDE +WRLLV KV+AA+  L P
Sbjct: 358  NEPDSCKVPLCRHFKEKMQQQTKKDEARWRLLVGKVIAAKGNLGP 402


>ref|XP_002323915.1| hypothetical protein POPTRDRAFT_825456 [Populus trichocarpa]
            gi|222866917|gb|EEF04048.1| hypothetical protein
            POPTRDRAFT_825456 [Populus trichocarpa]
          Length = 363

 Score =  455 bits (1171), Expect = e-125
 Identities = 222/346 (64%), Positives = 265/346 (76%)
 Frame = +1

Query: 283  SSRSNYHKRFLVSSYVSRDFKDAWDRLFKEGYETDVHVVTEDKTXXXXXXXXXXXXXPVL 462
            S  +N  KR L +  V R+ KD WDRLFKE Y  DV+++T+ K+             PVL
Sbjct: 18   SKAANNCKRILETCSVPREIKDTWDRLFKEAYGVDVYIITDSKSYIPAHCNVLSISSPVL 77

Query: 463  RNFLKQAKLKDGIRYIEILGVPSRAVSVFIRFLYSASYEEDEMKNNAXXXXXXXXXXXXX 642
             N L+++K+KDGIRYI+ILGVP  AV +FIRFLYS+ YEEDEMK                
Sbjct: 78   GNILQRSKVKDGIRYIKILGVPCEAVYMFIRFLYSSCYEEDEMKKFVLHLMVLSHSYSIP 137

Query: 643  XXKRVCTNILEQTWLTTENVIDVLELARQCDAPRLSLICVRMVVKNFKKVSSSEGWKVMK 822
              KRVC + LEQ +LT ENVIDVL+LAR C+APRLS ICVRMVVK+ K +SS+EGWKVMK
Sbjct: 138  SLKRVCIDFLEQDYLTKENVIDVLQLARSCNAPRLSFICVRMVVKDLKTISSTEGWKVMK 197

Query: 823  RVNPELEQELLESIVEADSGYHENMRKNEEKKMYLQLHEAMEALLHICKDGCRTIGPRDK 1002
            R NP LEQEL+ES+VEADS   E +RK EE+K+YLQL+EAMEALLHIC+DGCRTIGP DK
Sbjct: 198  RANPALEQELVESVVEADSRKQERLRKIEERKVYLQLYEAMEALLHICRDGCRTIGPSDK 257

Query: 1003 VLKGSQITCSFPACKGLETLVRHFSICKVRVPGGCSHCKRMWQLLELHSRMCNEPATCKV 1182
            +LKGSQ+ C+FPACKGLE+LVRHFS CK RVP GC HCKRMWQLLELHSRMCN+P  CKV
Sbjct: 258  MLKGSQVPCNFPACKGLESLVRHFSNCKTRVPRGCVHCKRMWQLLELHSRMCNDPDYCKV 317

Query: 1183 PLCRHFKDKMQQQSKKDETKWRLLVSKVVAARSALKPWSTQKRRMF 1320
            PLCRHFK+KMQQQ+KKDE KW+LLVSKV+AA++AL P+S +   +F
Sbjct: 318  PLCRHFKEKMQQQTKKDEAKWKLLVSKVIAAKNALGPFSARPVDLF 363


>ref|XP_002309738.1| hypothetical protein POPTRDRAFT_216196 [Populus trichocarpa]
            gi|222852641|gb|EEE90188.1| hypothetical protein
            POPTRDRAFT_216196 [Populus trichocarpa]
          Length = 355

 Score =  444 bits (1142), Expect = e-122
 Identities = 217/341 (63%), Positives = 261/341 (76%)
 Frame = +1

Query: 283  SSRSNYHKRFLVSSYVSRDFKDAWDRLFKEGYETDVHVVTEDKTXXXXXXXXXXXXXPVL 462
            S  +++ KR   S  V ++ KD WDRLFKE Y +DV+++TE  +             PVL
Sbjct: 15   SKTTSHCKRISASCSVPKETKDTWDRLFKEAYGSDVYIITESNSYIPAHCNVLSTASPVL 74

Query: 463  RNFLKQAKLKDGIRYIEILGVPSRAVSVFIRFLYSASYEEDEMKNNAXXXXXXXXXXXXX 642
               L+++K+K+GIRYI ILGV   AV VFIRFLYS+ YEEDEMK                
Sbjct: 75   GTILQRSKVKNGIRYISILGVLCEAVHVFIRFLYSSCYEEDEMKKFVLHLLVLSHSYSVP 134

Query: 643  XXKRVCTNILEQTWLTTENVIDVLELARQCDAPRLSLICVRMVVKNFKKVSSSEGWKVMK 822
              KR C ++LEQ  LT ENVIDVL+LAR CDAPRLSLICVRMVVK+ K VSS+EGWKVM+
Sbjct: 135  SLKRFCIDLLEQDCLTRENVIDVLQLARSCDAPRLSLICVRMVVKDLKSVSSTEGWKVMR 194

Query: 823  RVNPELEQELLESIVEADSGYHENMRKNEEKKMYLQLHEAMEALLHICKDGCRTIGPRDK 1002
            R NP LEQEL+ES+VEADS   E +RK EE+K+YLQL+EAMEALLHIC+DGCRTIGP DK
Sbjct: 195  RANPALEQELVESVVEADSRKQERLRKIEERKVYLQLYEAMEALLHICRDGCRTIGPSDK 254

Query: 1003 VLKGSQITCSFPACKGLETLVRHFSICKVRVPGGCSHCKRMWQLLELHSRMCNEPATCKV 1182
            +LKGSQ+ C+FPACK LE+LVRHFS CK RVPGGC HCKRMWQLLELHSRMC+EP +CKV
Sbjct: 255  MLKGSQVACNFPACKALESLVRHFSKCKSRVPGGCIHCKRMWQLLELHSRMCDEPDSCKV 314

Query: 1183 PLCRHFKDKMQQQSKKDETKWRLLVSKVVAARSALKPWSTQ 1305
            PLCRHFK+KMQQQ+KK+E KW+LLVSKV+AA++AL P+S +
Sbjct: 315  PLCRHFKEKMQQQTKKEEAKWKLLVSKVIAAKNALGPFSAR 355


Top