BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001036
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26244.1| similar to chaperonin containing TCP-1 complex ga...    86   8e-30
ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...    92   9e-29
emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]    92   9e-29
ref|XP_003593572.1| T-complex protein 1 subunit gamma, partial [...    91   1e-28
gb|ACJ85688.1| unknown [Medicago truncatula]                           91   1e-28

>gb|AAC26244.1| similar to chaperonin containing TCP-1 complex gamma chain
           [Arabidopsis thaliana]
          Length = 562

 Score = 86.3 bits (212), Expect(3) = 8e-30
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = +3

Query: 402 LSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHRTVICRAYNRHLRMLLVCLTKLLF 581
           LSRTQDEEVGDGTTSVI+LAGEMLHVAEAF+ K+YH TVICRAY + L   +  L K+  
Sbjct: 70  LSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAM 129

Query: 582 QL 587
            +
Sbjct: 130 SI 131



 Score = 61.2 bits (147), Expect(3) = 8e-30
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +1

Query: 301 DAAGAIIVTNDGNAILRELDVAHPAAKSMIELT 399
           DA G I+VTNDGNAILRELDVAHPAAKSMIEL+
Sbjct: 39  DAGGGIVVTNDGNAILRELDVAHPAAKSMIELS 71



 Score = 28.9 bits (63), Expect(3) = 8e-30
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +2

Query: 227 IFFFAFQAVADIIRRTTLGPR 289
           I  F  QAVADII RTTLGPR
Sbjct: 12  IVVFVVQAVADII-RTTLGPR 31


>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|296084839|emb|CBI27721.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score = 92.4 bits (228), Expect(2) = 9e-29
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +3

Query: 402 LSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHRTVICRAYNRHLRMLLVCLTKLLF 581
           LSRTQDEEVGDGTTSVI+LAGEMLHVAEAFI+KSYH TVICRAYN+ L   +  L K+  
Sbjct: 81  LSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDAIAVLDKIAM 140

Query: 582 QL 587
            +
Sbjct: 141 SI 142



 Score = 60.1 bits (144), Expect(2) = 9e-29
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +1

Query: 301 DAAGAIIVTNDGNAILRELDVAHPAAKSMIELT 399
           DA G I+VTNDGNAILRELD+AHPAAKSMIEL+
Sbjct: 50  DAGGGIVVTNDGNAILRELDLAHPAAKSMIELS 82


>emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]
          Length = 557

 Score = 92.4 bits (228), Expect(2) = 9e-29
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +3

Query: 402 LSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHRTVICRAYNRHLRMLLVCLTKLLF 581
           LSRTQDEEVGDGTTSVI+LAGEMLHVAEAFI+KSYH TVICRAYN+ L   +  L K+  
Sbjct: 81  LSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVICRAYNKALEDAIAVLDKIAM 140

Query: 582 QL 587
            +
Sbjct: 141 SI 142



 Score = 60.1 bits (144), Expect(2) = 9e-29
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +1

Query: 301 DAAGAIIVTNDGNAILRELDVAHPAAKSMIELT 399
           DA G I+VTNDGNAILRELD+AHPAAKSMIEL+
Sbjct: 50  DAGGGIVVTNDGNAILRELDLAHPAAKSMIELS 82


>ref|XP_003593572.1| T-complex protein 1 subunit gamma, partial [Medicago truncatula]
           gi|355482620|gb|AES63823.1| T-complex protein 1 subunit
           gamma, partial [Medicago truncatula]
          Length = 371

 Score = 90.9 bits (224), Expect(2) = 1e-28
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = +3

Query: 402 LSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHRTVICRAYNRHLRMLLVCLTKL 575
           LSRTQDEEVGDGTTSVIILAGEMLHVAEAFI+K+YH TVICRAYN+ L   +  + K+
Sbjct: 81  LSRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKNYHPTVICRAYNKALEDAIAAIDKI 138



 Score = 61.2 bits (147), Expect(2) = 1e-28
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +1

Query: 301 DAAGAIIVTNDGNAILRELDVAHPAAKSMIELT 399
           DA+G I+VTNDGNAILRELD+AHPAAKSMIEL+
Sbjct: 50  DASGGIVVTNDGNAILRELDIAHPAAKSMIELS 82


>gb|ACJ85688.1| unknown [Medicago truncatula]
          Length = 171

 Score = 90.9 bits (224), Expect(2) = 1e-28
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = +3

Query: 402 LSRTQDEEVGDGTTSVIILAGEMLHVAEAFINKSYHRTVICRAYNRHLRMLLVCLTKL 575
           LSRTQDEEVGDGTTSVIILAGEMLHVAEAFI+K+YH TVICRAYN+ L   +  + K+
Sbjct: 81  LSRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKNYHPTVICRAYNKALEDAIAAIDKI 138



 Score = 61.2 bits (147), Expect(2) = 1e-28
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +1

Query: 301 DAAGAIIVTNDGNAILRELDVAHPAAKSMIELT 399
           DA+G I+VTNDGNAILRELD+AHPAAKSMIEL+
Sbjct: 50  DASGGIVVTNDGNAILRELDIAHPAAKSMIELS 82