BLASTX nr result
ID: Coptis25_contig00001033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001033
(1735 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2... 333 1e-88
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com... 309 1e-81
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera] 297 7e-78
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote... 296 9e-78
ref|XP_004148195.1| PREDICTED: sister chromatid cohesion 1 prote... 276 9e-72
>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
predicted protein [Populus trichocarpa]
Length = 606
Score = 333 bits (853), Expect = 1e-88
Identities = 210/513 (40%), Positives = 278/513 (54%), Gaps = 21/513 (4%)
Frame = +2
Query: 2 ASSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAANITLLDPIDSYQ 181
+++ TT + F+QT Y MRLD+VD+P +N++ RE D + HQADA NITL + DSYQ
Sbjct: 114 SNAATTTMGFQQTAYFTMRLDNVDEPFVNNDT-REGDASHHLHQADADNITLFERFDSYQ 172
Query: 182 PDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLHHEVPQQVDEIQDLFPEPQ 358
DA Y+RF+RFDIEGD+ETQ NFT+ D+ IP+ LIPSP + Q+ +E QD PE Q
Sbjct: 173 ADADAYNRFERFDIEGDEETQVNFTSADHMDIPTTLIPSPHEQDEAQRAEENQDHHPEFQ 232
Query: 359 NNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXXGHPQLDYEQTIIPGPLYQ 538
N S E K + + + R ++ + +DYEQTIIPG +YQ
Sbjct: 233 VNQQSNECKGARQDQQKRRPIKRKTRRQATTT--------------VDYEQTIIPGHVYQ 278
Query: 539 SWLQKTADIVTNRGGTKR-RIIPISTMKTAHLMELPPGAXXXXXXXXXXTEIHYPRPLLD 715
SWLQ +DIV+ RG ++ R+ +ST K ++LMELPP EI+YP PLL+
Sbjct: 279 SWLQNASDIVSRRGRKRKARMGIMSTTKISNLMELPPTVLIDDNGNR---EIYYPAPLLE 335
Query: 716 LHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXXF--NQNPVEFSVEDFHSGVGSHPEHR 889
L +S Q PHD + P ++ +D HSGVGS
Sbjct: 336 LWTKSTQ--PPHDSPSERTSAPLPPEPSKSSPPDRVNYEEPAGYTFDDVHSGVGSQSLGT 393
Query: 890 SIERQXXXXXXXXXXFPV----------------NEFNQMFTPGNSGSNERSIPSSGSGN 1021
SIE+ + E N M TP NSG SIPSSGSG+
Sbjct: 394 SIEKMRTNVVNDEQSMDILMEELKANLRNNGVRMTEAN-MATPRNSGDGVGSIPSSGSGH 452
Query: 1022 GLL-HSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLTPNFKLRRVSEDEPSHDQ 1198
G+ H V H S L+ V EE+ + PNF+L R+SE+ P+ DQ
Sbjct: 453 GIPPHYLEVNLGRSSKKGRHSSSRHSGSSLETVVEEDPWRFADPNFELSRLSENGPTPDQ 512
Query: 1199 EMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVGGTEFESLNQLSDGMNQAKAAK 1378
E+L+ET PTQT + P+DK DS+R +KTHF+T G + ESLN L+ GMN AA
Sbjct: 513 ELLVETEPTQTQHHVVGQPVDKIADSIRMQMKTHFETPGAPQVESLNNLAAGMNTKAAAL 572
Query: 1379 LFYQICVSATRDFLKVKQTKAYGDILIFKGSKM 1477
LFYQ CV A+RDFL+V+Q YGDILI KG+KM
Sbjct: 573 LFYQTCVLASRDFLRVEQKVPYGDILISKGAKM 605
>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 613
Score = 309 bits (792), Expect = 1e-81
Identities = 206/516 (39%), Positives = 281/516 (54%), Gaps = 25/516 (4%)
Frame = +2
Query: 5 SSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAANITLLDPIDSYQP 184
S+ A+ F++T Y MRLD VD+P IN++ REED+++Q HQAD +I L + D YQ
Sbjct: 115 SNANAAMEFQRTAYFAMRLDDVDEPFINND-SREEDVSQQLHQADPEHIRLFERFDLYQT 173
Query: 185 DAFLYDRFDRFDIEGDDETQTNFTTQDNSIIP-SLIPSPLHHEVPQQVDEIQDLFPEPQN 361
+Y+R++RFDIE ++ETQ NFT+ ++ IP SLIPSP + +Q + +
Sbjct: 174 HTEMYNRYERFDIE-EEETQLNFTSGEHVEIPTSLIPSPPKQDEAPSAYLVQLMKSKTVK 232
Query: 362 NHVSPEQKNSNRSD-ES--REEAQQPQPNEQXXXXXXXXXXXXXGHPQLDYEQTIIPGPL 532
N EQKN++ +D ES +E+ Q+ P ++ P +DYEQTIIPGP
Sbjct: 233 NK-PVEQKNASLTDLESMMKEDQQRKGPTKKRIKRQAT--------PAMDYEQTIIPGPT 283
Query: 533 YQSWLQKTADIVTNRGGTKR-RIIPISTMKTAHLMELPPGAXXXXXXXXXXTEIHYPRPL 709
YQSWLQ +DIV+ RG ++ R +S MKTA+LMELPP EI+YP PL
Sbjct: 284 YQSWLQNASDIVSRRGRKRKARRDIMSKMKTANLMELPPLVLIDDLSANANGEIYYPAPL 343
Query: 710 LDLHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXXFN--QNPVEFSVEDFHSGVGSHPE 883
L+L ++S Q PHD Q+P + EDF SG+GS
Sbjct: 344 LELWMKSTQ--PPHDSPSARTSAPLPPEPSSSSPLERGDYQDPTGYPFEDFQSGIGSE-S 400
Query: 884 HRSIERQXXXXXXXXXXFP--VNEFNQMFTPGNSGSNE---------------RSIPSSG 1012
+IE+Q +NE S + E RSIPSSG
Sbjct: 401 LGAIEKQRKTIINEVMPMETLMNELRSKLVNNGSKTTEANLDITFCKFTGDEVRSIPSSG 460
Query: 1013 SGNGL-LHSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLTPNFKLRRVSEDEPS 1189
SG+G+ H + V H S L+PV EE S++ PNFKL R+SE + +
Sbjct: 461 SGHGMPSHQSEVHSARKRPYSGSR---HSGSSLEPVEEENSWQFPDPNFKLARLSEKDLT 517
Query: 1190 HDQEMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVGGTEFESLNQLSDGMNQAK 1369
DQE+L+ETGPTQT PI P+DK TD++R +KTHF+T G ESLN L+ GMN+
Sbjct: 518 PDQELLVETGPTQTQKPIINPPVDKMTDTIRMQMKTHFETPGAPAVESLNNLAAGMNRKG 577
Query: 1370 AAKLFYQICVSATRDFLKVKQTKAYGDILIFKGSKM 1477
AA LFYQ CV A+RD L+V+Q YG+ILI +G K+
Sbjct: 578 AAMLFYQTCVLASRDCLRVEQKVPYGEILISRGEKL 613
>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
Length = 597
Score = 297 bits (760), Expect = 7e-78
Identities = 212/519 (40%), Positives = 271/519 (52%), Gaps = 27/519 (5%)
Frame = +2
Query: 2 ASSKTTAIRFE-QTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAANITLLDPIDSY 178
+++ TT + + Q YI + LD+VD+ I E D+ + +HQADA NITL +P +SY
Sbjct: 110 SNTATTVMGLQPQGAYICVCLDNVDETYITGNTGGE-DVLQDNHQADADNITLWEPFNSY 168
Query: 179 QPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLH---HEVPQQVDEIQDLF 346
Q D L +R +RF E D E Q NFT + IPS LIPSP H H+ DEIQDL
Sbjct: 169 QADTNLNNRDERF--EEDGEIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGXPADEIQDLH 224
Query: 347 PEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXXGHPQLDYEQTIIPG 526
PE Q N E K N+S+ Q QP + +D EQ IIPG
Sbjct: 225 PENQVNQQPDEHKEVNQSE-------QDQPRQGIIRKRGRRPAAFV----MDDEQIIIPG 273
Query: 527 PLYQSWLQKTADIVTNRGGTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXXTEIHYPRP 706
LYQSWLQ ++IV RG ++ ++P +K A+LMELPP EI YP P
Sbjct: 274 NLYQSWLQDPSNIVARRGKRRKNLMPX--VKIANLMELPPSTLIDGILTSGTGEIQYPAP 331
Query: 707 LLDLHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXX--FNQNPVEFSVEDFHSGVGSHP 880
LL+L +RS Q PHD +Q P F EDF SGVGS
Sbjct: 332 LLELWMRSIQ--LPHDSPSGRNTPPQPPEPSSSSPSHRVHHQGPAGFPFEDFLSGVGSPS 389
Query: 881 EHRSIERQXXXXXXXXXX-FPV--------------NEFNQMFTPGNSGS---NE-RSIP 1003
SIE+Q F + +FTPGNSG NE RS P
Sbjct: 390 LGVSIEKQRGTNHDNNESQFEILMTSLRTKLMNDNARTTEAVFTPGNSGGATVNEVRSFP 449
Query: 1004 SSGSGNGL-LHSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLTPNFKLRRVSED 1180
S SG+G H++ V H S L+PV EE F PNFKL ++SED
Sbjct: 450 GSASGHGSPSHTSEVNS-----------GRHSGSSLEPVDEEHPFNHTDPNFKLSKLSED 498
Query: 1181 EPSHDQEMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVGGTEFESLNQLSDGMN 1360
+ E+L+ETGPTQT PI P++K TDS+R HLKTHFDT G + ESL+QL+ GM+
Sbjct: 499 FMMPEHELLVETGPTQTQNPIIPPPIEKITDSIRMHLKTHFDTPGAPQRESLDQLASGMD 558
Query: 1361 QAKAAKLFYQICVSATRDFLKVKQTKAYGDILIFKGSKM 1477
+ +AA+LFYQ CV ATR F+KV+Q + YGDILI +G+KM
Sbjct: 559 RPRAAQLFYQTCVLATRGFIKVEQNEPYGDILISRGAKM 597
>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
vinifera]
Length = 608
Score = 296 bits (759), Expect = 9e-78
Identities = 212/519 (40%), Positives = 270/519 (52%), Gaps = 27/519 (5%)
Frame = +2
Query: 2 ASSKTTAIRFE-QTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAANITLLDPIDSY 178
+++ TT + + Q YI + LD+VD+ I E D+ + +HQADA NITL +P +SY
Sbjct: 116 SNTATTVMGLQPQGAYICVCLDNVDETYITGNTGGE-DVLQDNHQADADNITLWEPFNSY 174
Query: 179 QPDAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPS-LIPSPLH---HEVPQQVDEIQDLF 346
Q D L +R +RF E D E Q NFT + IPS LIPSP H H+ DEIQDL
Sbjct: 175 QADTNLNNRDERF--EEDGEIQLNFTPAEQ--IPSTLIPSPSHQNEHQKGDPADEIQDLH 230
Query: 347 PEPQNNHVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXXGHPQLDYEQTIIPG 526
PE Q N E K N+S+ Q QP + +D EQ IIPG
Sbjct: 231 PENQVNQQPDEHKEVNQSE-------QDQPRQGIIRKRGRRPAAFV----MDDEQIIIPG 279
Query: 527 PLYQSWLQKTADIVTNRGGTKRRIIPISTMKTAHLMELPPGAXXXXXXXXXXTEIHYPRP 706
LYQSWLQ ++IV RG ++ ++PI +K A+LMELPP EI YP P
Sbjct: 280 NLYQSWLQDPSNIVARRGKRRKNLMPI--VKIANLMELPPSTLIDGILTSGTGEIQYPAP 337
Query: 707 LLDLHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXX--FNQNPVEFSVEDFHSGVGSHP 880
LL+L +RS Q PHD +Q P F EDF SGVGS
Sbjct: 338 LLELWMRSIQ--LPHDSPSGRNTPPQPPEPSSSSPSHRVHHQGPAGFPFEDFLSGVGSPS 395
Query: 881 EHRSIERQXXXXXXXXXX-FPV--------------NEFNQMFTPGNSGS---NE-RSIP 1003
SIE+Q F + +FTPGNSG NE RS P
Sbjct: 396 LGVSIEKQRGTNHDNNESQFEILMTSLRTKLMNDNARTTEAVFTPGNSGGATVNEVRSFP 455
Query: 1004 SSGSGNGL-LHSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLTPNFKLRRVSED 1180
S SG+G H++ V H S L+PV EE F PNFKL ++SE
Sbjct: 456 GSASGHGSPSHTSEVNSGRINKKRPYSWSRHSGSSLEPVDEEHPFNHTDPNFKLSKLSE- 514
Query: 1181 EPSHDQEMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVGGTEFESLNQLSDGMN 1360
E+L+ETGPTQT PI P++K TDS+R HLKTHFDT G + ESL+QL+ GM+
Sbjct: 515 -----HELLVETGPTQTQNPIIPPPIEKITDSIRMHLKTHFDTPGAPQRESLDQLASGMD 569
Query: 1361 QAKAAKLFYQICVSATRDFLKVKQTKAYGDILIFKGSKM 1477
+ +AA+LFYQ CV ATR F+KV+Q + YGDILI +G+KM
Sbjct: 570 RPRAAQLFYQTCVLATRGFIKVEQNEPYGDILISRGAKM 608
>ref|XP_004148195.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Cucumis
sativus] gi|449529198|ref|XP_004171588.1| PREDICTED:
sister chromatid cohesion 1 protein 1-like [Cucumis
sativus]
Length = 589
Score = 276 bits (707), Expect = 9e-72
Identities = 190/511 (37%), Positives = 261/511 (51%), Gaps = 20/511 (3%)
Frame = +2
Query: 5 SSKTTAIRFEQTRYIHMRLDSVDDPVINDEIPREEDLNEQHHQADAANITLLDPIDSYQP 184
S T+ ++F+QT + MRLDSVD+P IND+ E+D ++ HQ DA NITL++ D YQ
Sbjct: 105 SYNTSPMKFQQTAFFSMRLDSVDEPYINDKTV-EDDPSQNFHQTDAENITLIERFDMYQS 163
Query: 185 DAFLYDRFDRFDIEGDDETQTNFTTQDNSIIPSLIPSPLHHEVPQQVDEIQDLFPEPQNN 364
+DRF+RFDIE D +TQ +F + D + IP+ + P P D+ +PE +
Sbjct: 164 KTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPP-----PPPPDK----YPEGPPD 214
Query: 365 HVSPEQKNSNRSDESREEAQQPQPNEQXXXXXXXXXXXXXGHPQLDYEQTIIPGPLYQSW 544
+Q + D+ EE+++ + EQ +DYEQTIIPG +YQSW
Sbjct: 215 AEVQDQHLEHIVDQPAEESKELRQVEQVARKRKAKRTAAS---LMDYEQTIIPGHIYQSW 271
Query: 545 LQKTADIVTNRGGT-KRRIIPISTMKTAHLMELPPGAXXXXXXXXXXTEIHYPRPLLDLH 721
L+ +D+++ R K+R P+ T K A LM+LPP E +YP PLL+L
Sbjct: 272 LKDVSDLISRRRRKRKQRTGPMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELW 331
Query: 722 LRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXXFNQNPVEFSVEDFHSGVGSHPEHRSIER 901
+RS R P D +P E ED +SGVGS S+E+
Sbjct: 332 MRSI--RQPPDSPSERSSTPLPPEPSVF-------SPPERPFEDHYSGVGSQSFGSSMEK 382
Query: 902 QXXXXXXXXXXFPVNEF--------------NQMFTPGNSGSNERSIPSSGSGNGLLH-S 1036
P+ E NQM TPGNSG RS+ SS S + +L +
Sbjct: 383 LMTGQVNGGAEIPLEELGPNIMDNVMEMAERNQMGTPGNSGFGVRSVSSSASEHDVLSKN 442
Query: 1037 TPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLT-PNFKLRRVSEDEPSHDQEMLIE 1213
+ + + GL+PVAEE + + PNFKL R+SE++P ++L E
Sbjct: 443 SGTDSLRFNKKRSYSSSKRSSGGLEPVAEENPWSHHSDPNFKLARLSENDP----DLLEE 498
Query: 1214 TGPTQTPLP---IFYHPMDKTTDSVRKHLKTHFDTVGGTEFESLNQLSDGMNQAKAAKLF 1384
T TQT L I Y P DK TDS+R +K HFDT G ESLN L+ GMN+ AA LF
Sbjct: 499 TALTQTQLTQAAIKYPPADKITDSIRMQMKAHFDTPGAASTESLNNLAAGMNRKAAAMLF 558
Query: 1385 YQICVSATRDFLKVKQTKAYGDILIFKGSKM 1477
YQ CV A+ D+LKV Q +GDI I KG+KM
Sbjct: 559 YQTCVLASSDYLKVNQQVPFGDIFISKGTKM 589