BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001018
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...   258   e-122
ref|XP_002531291.1| pentatricopeptide repeat-containing protein,...   239   e-116
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi...   209   e-107
ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|2...   207   e-104
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi...   208   e-101

>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Vitis vinifera]
          Length = 654

 Score =  258 bits (658), Expect(2) = e-122
 Identities = 129/211 (61%), Positives = 157/211 (74%)
 Frame = +1

Query: 1   HFKQILAQMIRIDLVAQTFTMSRLLFFSAISHPENIDMAILLFNYHTLTPNLFIYNMMIS 180
           HFKQILAQ++RI+L+ QTF MSRL+ FSAI+HPEN+DMA+LLF +HT  PNL+IYN MIS
Sbjct: 46  HFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDMAVLLFRHHTPHPNLYIYNTMIS 105

Query: 181 ALSFSTTQSFTIYQSMLQLHIYPDKHTXXXXXXXXXXXXQGKQIHNHAIITGFKSYGYLQ 360
           ALS S  QSF  Y S+L   IYP++ T            Q  QIH HAIITG   YGYLQ
Sbjct: 106 ALSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQIHCHAIITGSFYYGYLQ 165

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           N+L+K+Y E  +M LA+QV QQMA  D VSFNI+I GYA+KG ++EAL+  HEMV  G+ 
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIHAWIAR 633
           PDEFTM+GLL+ CGRL D +LGKS+HAWI R
Sbjct: 226 PDEFTMLGLLICCGRLGDAQLGKSVHAWIER 256



 Score =  210 bits (534), Expect(2) = e-122
 Identities = 100/168 (59%), Positives = 128/168 (76%)
 Frame = +3

Query: 639  RRELYGAQNLILLNALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESA 818
            RR L  + NLIL NALLDMYVK +EL +AQ IF  +  KD ISWNT+I+GYAK+G+LE A
Sbjct: 256  RRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIA 315

Query: 819  SSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEV 998
             + F +MP +DLVSWNS+IAGYAQ+ +   V  LF+ M+ EN+ PD VT++ LV AAAE+
Sbjct: 316  HNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEI 375

Query: 999  GVLYQGRWIHGWLARAHIKIDAFLASALVDMYCKCGSIEKALMIFDKV 1142
            G L+ GRWIHGW+ R  +KIDAFL SA +DMY KCGSI++A M+F +V
Sbjct: 376  GALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREV 423



 Score = 67.0 bits (162), Expect(2) = 2e-15
 Identities = 31/91 (34%), Positives = 53/91 (58%)
 Frame = +1

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           N++I  Y++ G + +AH   + M  +D+VS+N +I+GYA+KG  +   +LF  MV   I 
Sbjct: 300 NTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIW 359

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIHAWIAR 633
           PD  T++ L+ +   +     G+ IH W+ R
Sbjct: 360 PDFVTIINLVSAAAEIGALHHGRWIHGWVVR 390



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 32/113 (28%), Positives = 47/113 (41%)
 Frame = +3

Query: 678  NALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESASSLFNEMPKKDLV 857
            +A +DMY K   ++ A  +F  + EKDV  W T+I+G+A  G    A  LF EM      
Sbjct: 401  SAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQ----- 455

Query: 858  SWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEVGVLYQG 1016
                                       E V P++VT V ++ A +  G + QG
Sbjct: 456  ---------------------------EYVMPNQVTFVAVLTACSHSGFVSQG 481



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +3

Query: 771  NTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVK 950
            NT++  Y +   +  A  +F +M   D VS+N +I GYA++ +    +     M+G  +K
Sbjct: 166  NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225

Query: 951  PDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAHI--KIDAFLASALVDMYCKCGSIEKAL 1124
            PD+ T++ L+     +G    G+ +H W+ R  +    +  L +AL+DMY KC  +  A 
Sbjct: 226  PDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQ 285

Query: 1125 MIFDKVV 1145
             IF+ +V
Sbjct: 286  SIFNVIV 292


>ref|XP_002531291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529124|gb|EEF31104.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  239 bits (611), Expect(2) = e-116
 Identities = 119/211 (56%), Positives = 155/211 (73%)
 Frame = +1

Query: 1   HFKQILAQMIRIDLVAQTFTMSRLLFFSAISHPENIDMAILLFNYHTLTPNLFIYNMMIS 180
           +FKQIL QM+R +L+ QTF MSRL+FFSAISHPEN+DMA++LFN++T  PNL+IYN MIS
Sbjct: 46  NFKQILGQMMRSNLIGQTFPMSRLIFFSAISHPENLDMALILFNHYTPYPNLYIYNTMIS 105

Query: 181 ALSFSTTQSFTIYQSMLQLHIYPDKHTXXXXXXXXXXXXQGKQIHNHAIITGFKSYGYLQ 360
           ALS +T Q   +Y SML   I PDKHT            + KQ+  HAII G  +Y YLQ
Sbjct: 106 ALSSATAQP--LYNSMLSTGIGPDKHTLLYLLHSARHVSEVKQVQCHAIILGLSTYRYLQ 163

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           NSLIK+Y E G   LAH++ +QM   DVVSFNI+I+G A++GC +EA+QL ++M+   + 
Sbjct: 164 NSLIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITGCAKQGCGLEAIQLLYDMMALDLK 223

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIHAWIAR 633
           PDEFTM+GLL+SCG+L + R GK++HAWI R
Sbjct: 224 PDEFTMLGLLVSCGKLGEARFGKTVHAWIER 254



 Score =  207 bits (528), Expect(2) = e-116
 Identities = 101/169 (59%), Positives = 126/169 (74%)
 Frame = +3

Query: 639  RRELYGAQNLILLNALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESA 818
            RR+   + NLIL NALLDMYVK +EL+LA R F  L EKDV+SWNTII+G AK GDLE A
Sbjct: 254  RRKSITSSNLILGNALLDMYVKCQELDLAHRTFSALTEKDVVSWNTIIAGCAKAGDLELA 313

Query: 819  SSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEV 998
             +LF++MP +D VSWNSLIA YA R ++  V DL   M+ ENV P+  T+ +L+ AAAE+
Sbjct: 314  RTLFDQMPCRDFVSWNSLIAEYANRGDFIIVRDLLYDMVAENVVPNNTTMASLISAAAEI 373

Query: 999  GVLYQGRWIHGWLARAHIKIDAFLASALVDMYCKCGSIEKALMIFDKVV 1145
            G L QGRW HGW+ R  IKIDA L SAL+DMYCKCGSI  A +IF++++
Sbjct: 374  GALDQGRWAHGWVIRMQIKIDAVLGSALIDMYCKCGSINNAFLIFNEII 422



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +3

Query: 771  NTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVK 950
            N++I  Y + G    A  +F +MP  D+VS+N +I G A++      + L   M+  ++K
Sbjct: 164  NSLIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITGCAKQGCGLEAIQLLYDMMALDLK 223

Query: 951  PDKVTVVTLVCAAAEVGVLYQGRWIHGWLAR--AHIKIDAFLASALVDMYCKCGSIEKAL 1124
            PD+ T++ L+ +  ++G    G+ +H W+ R  +    +  L +AL+DMY KC  ++ A 
Sbjct: 224  PDEFTMLGLLVSCGKLGEARFGKTVHAWIERRKSITSSNLILGNALLDMYVKCQELDLAH 283

Query: 1125 MIF 1133
              F
Sbjct: 284  RTF 286



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 33/104 (31%), Positives = 58/104 (55%)
 Frame = +3

Query: 756  DVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMI 935
            D +  + +I  Y K G + +A  +FNE+ +KD++ W ++I G+A     S  ++LF  M 
Sbjct: 394  DAVLGSALIDMYCKCGSINNAFLIFNEIIEKDVILWTTMITGFAFHGYGSKALELFYEM- 452

Query: 936  GENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAHIKIDAF 1067
              NV P+++T V+++ A +  G++ QG  I   L + H    AF
Sbjct: 453  QANVTPNEITFVSVLAACSHSGLVDQGIEIFNSLKQRHTDRAAF 496



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 31/94 (32%), Positives = 53/94 (56%)
 Frame = +1

Query: 298 QGKQIHNHAIITGFKSYGYLQNSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYA 477
           QG+  H   I    K    L ++LI MY + G +N A  +  ++ ++DV+ +  +I+G+A
Sbjct: 378 QGRWAHGWVIRMQIKIDAVLGSALIDMYCKCGSINNAFLIFNEIIEKDVILWTTMITGFA 437

Query: 478 RKGCSVEALQLFHEMVFTGIDPDEFTMVGLLMSC 579
             G   +AL+LF+EM    + P+E T V +L +C
Sbjct: 438 FHGYGSKALELFYEMQ-ANVTPNEITFVSVLAAC 470


>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  209 bits (531), Expect(2) = e-107
 Identities = 107/212 (50%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
 Frame = +1

Query: 4   FKQILAQMIRIDLVAQTFTMSRLLFFSAISHPENIDMAILLFNYHTLTPNLFIYNMMISA 183
           FKQIL  M+R +LV QTF MSRLLFFSA+SHPEN+++AILLFN+ T  PNL+I+N MI  
Sbjct: 47  FKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILG 106

Query: 184 LSFSTTQSFTIYQSMLQLHIYPDKHTXXXXXXXXXXXXQGKQIHNHAIITGFKS-YGYLQ 360
             FS  ++FTIY+SMLQ   YPD+ T            + KQIH HA++ G  S   YL+
Sbjct: 107 FPFSNEKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLR 166

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           NSLIK Y + G    A Q+  +M+ ++VVS+N +I G+A+ G  +  L+LFH+M   G++
Sbjct: 167 NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLE 226

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIHAWIARS 636
           PD+FTM+GLL+ CG+L + +LGKS+HA I +S
Sbjct: 227 PDDFTMLGLLLLCGQLGETKLGKSVHAQIEKS 258



 Score =  208 bits (530), Expect(2) = e-107
 Identities = 99/163 (60%), Positives = 126/163 (77%)
 Frame = +3

Query: 654  GAQNLILLNALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESASSLFN 833
            G+ NLIL NALLDMYVK  EL+LA+++F    EKD +SWNTII+GYAK+G+LE A  LFN
Sbjct: 260  GSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFN 319

Query: 834  EMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEVGVLYQ 1013
            ++P +D+VSWNSLI+GYAQ  ++  V  LF  M  ENVKPDKVT+V L+ A AE+G L Q
Sbjct: 320  QIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQ 379

Query: 1014 GRWIHGWLARAHIKIDAFLASALVDMYCKCGSIEKALMIFDKV 1142
            GRWIHG   +   KI+AF  SAL+DMYCKCGSIE+A +IF+++
Sbjct: 380  GRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQI 422



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 41/135 (30%), Positives = 78/135 (57%)
 Frame = +3

Query: 732  IFGTLREKDVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAV 911
            +FG L +++ +  N++I  Y   G  E A  LF+EM  +++VS+N++I G+A+  N   +
Sbjct: 155  VFGLLSKEEYLR-NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGI 213

Query: 912  MDLFKGMIGENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAHIKIDAFLASALVDM 1091
            ++LF  M    ++PD  T++ L+    ++G    G+ +H  + ++    +  L +AL+DM
Sbjct: 214  LELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDM 273

Query: 1092 YCKCGSIEKALMIFD 1136
            Y KC  ++ A  +FD
Sbjct: 274  YVKCNELKLARKVFD 288



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 38/134 (28%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
 Frame = +3

Query: 744  LREKDVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLF 923
            L + +  S + +I  Y K G +E A  +FN++P+KD+ +W ++I G+A     +  ++LF
Sbjct: 391  LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELF 450

Query: 924  KGMIGENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAH-IKIDAFLASALVDMYCK 1100
              M  E  KP+ VT V+++ A +  G++ +G  I   + + + I+        LVD+ C+
Sbjct: 451  SVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCR 509

Query: 1101 CGSIEKALMIFDKV 1142
             G +  A+ + +K+
Sbjct: 510  SGRLLDAIGVIEKM 523



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +1

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           N++I  Y++ G++ LA  +  Q+  +D+VS+N LISGYA+ G  V    LF  M    + 
Sbjct: 299 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVK 358

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIH 618
           PD+ T+V L+ +   +     G+ IH
Sbjct: 359 PDKVTIVNLISAVAEMGALDQGRWIH 384


>ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|222838210|gb|EEE76575.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  207 bits (526), Expect(2) = e-104
 Identities = 100/192 (52%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
 Frame = +1

Query: 61  MSRLLFFSAISHPENIDMAILLFNYHTLTPNLFIYNMMISALS-FSTTQSFTIYQSMLQL 237
           MSR ++FSA+SHP+N+D+AI LFN+ T  PNLFIYN +ISA S     +SF +Y  +L  
Sbjct: 1   MSRFIYFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIESFYLYNVLLSS 60

Query: 238 HIYPDKHTXXXXXXXXXXXXQGKQIHNHAIITGFKSYGYLQNSLIKMYSEYGQMNLAHQV 417
              PDK T            Q KQIH  AI+TG  S+GYLQN+LIK+Y E G + LAHQV
Sbjct: 61  GECPDKQTLLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQV 120

Query: 418 LQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGIDPDEFTMVGLLMSCGRLSDK 597
            ++M   D+VSFN++I GYA+KG  +EA++LFHEMV  G++PDEFT++GLL+SCG+L + 
Sbjct: 121 FEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNV 180

Query: 598 RLGKSIHAWIAR 633
           + GK++H W+ R
Sbjct: 181 KFGKAVHGWMER 192



 Score =  200 bits (508), Expect(2) = e-104
 Identities = 95/168 (56%), Positives = 127/168 (75%)
 Frame = +3

Query: 639  RRELYGAQNLILLNALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESA 818
            RR+   + NLIL NALLDMYVK +++ELA R FG L+EKD++SWN I++G AK+G+LE A
Sbjct: 192  RRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQA 251

Query: 819  SSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEV 998
               F +MP +D+VSWNSL+ GYA R ++++V +L   M+ E V PD VT+++LV AA E 
Sbjct: 252  RLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATES 311

Query: 999  GVLYQGRWIHGWLARAHIKIDAFLASALVDMYCKCGSIEKALMIFDKV 1142
            G L QGRW HGW+ R  IK+DAFL SAL+DMYCKCGSIE+A  +F ++
Sbjct: 312  GALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEI 359



 Score = 65.5 bits (158), Expect(2) = 8e-18
 Identities = 40/129 (31%), Positives = 66/129 (51%)
 Frame = +3

Query: 756  DVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMI 935
            D    + +I  Y K G +E AS +F E+ KKD+  W ++I G A     S  ++LF  M 
Sbjct: 332  DAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEM- 390

Query: 936  GENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAHIKIDAFLASALVDMYCKCGSIE 1115
             E+V PD VT V+++ A +  G++ QG  +   +    I+        LVD+  + G + 
Sbjct: 391  QEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVEHYGCLVDLLARSGRLS 450

Query: 1116 KALMIFDKV 1142
            +A  I D++
Sbjct: 451  EAKDIIDQM 459



 Score = 52.0 bits (123), Expect(2) = 8e-18
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = +1

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           N ++   ++ G++  A     QM  +D+VS+N L++GYA +G      +L  +MV   + 
Sbjct: 236 NMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVI 295

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIHAWIAR 633
           PD  TM+ L+ +         G+  H W+ R
Sbjct: 296 PDTVTMISLVSAATESGALDQGRWAHGWVIR 326



 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +3

Query: 771  NTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVK 950
            NT+I  Y + G +  A  +F +MP  D+VS+N +I GYA++      M LF  M+G  ++
Sbjct: 102  NTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLE 161

Query: 951  PDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAH--IKIDAFLASALVDMYCKCGSIEKAL 1124
            PD+ T++ L+ +  ++G +  G+ +HGW+ R    I  +  L +AL+DMY KC  +E AL
Sbjct: 162  PDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELAL 221

Query: 1125 MIF 1133
              F
Sbjct: 222  RTF 224


>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
            mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  208 bits (530), Expect(2) = e-101
 Identities = 99/163 (60%), Positives = 126/163 (77%)
 Frame = +3

Query: 654  GAQNLILLNALLDMYVKSEELELAQRIFGTLREKDVISWNTIISGYAKIGDLESASSLFN 833
            G+ NLIL NALLDMYVK  EL+LA+++F    EKD +SWNTII+GYAK+G+LE A  LFN
Sbjct: 195  GSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFN 254

Query: 834  EMPKKDLVSWNSLIAGYAQRRNWSAVMDLFKGMIGENVKPDKVTVVTLVCAAAEVGVLYQ 1013
            ++P +D+VSWNSLI+GYAQ  ++  V  LF  M  ENVKPDKVT+V L+ A AE+G L Q
Sbjct: 255  QIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQ 314

Query: 1014 GRWIHGWLARAHIKIDAFLASALVDMYCKCGSIEKALMIFDKV 1142
            GRWIHG   +   KI+AF  SAL+DMYCKCGSIE+A +IF+++
Sbjct: 315  GRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQI 357



 Score =  187 bits (475), Expect(2) = e-101
 Identities = 95/193 (49%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
 Frame = +1

Query: 61  MSRLLFFSAISHPENIDMAILLFNYHTLTPNLFIYNMMISALSFSTTQSFTIYQSMLQLH 240
           MSRLLFFSA+SHPEN+++AILLFN+ T  PNL+I+N MI    FS  ++FTIY+SMLQ  
Sbjct: 1   MSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNEKAFTIYRSMLQNG 60

Query: 241 IYPDKHTXXXXXXXXXXXXQGKQIHNHAIITGFKS-YGYLQNSLIKMYSEYGQMNLAHQV 417
            YPD+ T            + KQIH HA++ G  S   YL+NSLIK Y + G    A Q+
Sbjct: 61  TYPDRQTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQL 120

Query: 418 LQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGIDPDEFTMVGLLMSCGRLSDK 597
             +M+ ++VVS+N +I G+A+ G  +  L+LFH+M   G++PD+FTM+GLL+ CG+L + 
Sbjct: 121 FDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGET 180

Query: 598 RLGKSIHAWIARS 636
           +LGKS+HA I +S
Sbjct: 181 KLGKSVHAQIEKS 193



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 41/135 (30%), Positives = 78/135 (57%)
 Frame = +3

Query: 732  IFGTLREKDVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAV 911
            +FG L +++ +  N++I  Y   G  E A  LF+EM  +++VS+N++I G+A+  N   +
Sbjct: 90   VFGLLSKEEYLR-NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGI 148

Query: 912  MDLFKGMIGENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAHIKIDAFLASALVDM 1091
            ++LF  M    ++PD  T++ L+    ++G    G+ +H  + ++    +  L +AL+DM
Sbjct: 149  LELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDM 208

Query: 1092 YCKCGSIEKALMIFD 1136
            Y KC  ++ A  +FD
Sbjct: 209  YVKCNELKLARKVFD 223



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 38/134 (28%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
 Frame = +3

Query: 744  LREKDVISWNTIISGYAKIGDLESASSLFNEMPKKDLVSWNSLIAGYAQRRNWSAVMDLF 923
            L + +  S + +I  Y K G +E A  +FN++P+KD+ +W ++I G+A     +  ++LF
Sbjct: 326  LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELF 385

Query: 924  KGMIGENVKPDKVTVVTLVCAAAEVGVLYQGRWIHGWLARAH-IKIDAFLASALVDMYCK 1100
              M  E  KP+ VT V+++ A +  G++ +G  I   + + + I+        LVD+ C+
Sbjct: 386  SVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCR 444

Query: 1101 CGSIEKALMIFDKV 1142
             G +  A+ + +K+
Sbjct: 445  SGRLLDAIGVIEKM 458



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +1

Query: 361 NSLIKMYSEYGQMNLAHQVLQQMAQQDVVSFNILISGYARKGCSVEALQLFHEMVFTGID 540
           N++I  Y++ G++ LA  +  Q+  +D+VS+N LISGYA+ G  V    LF  M    + 
Sbjct: 234 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVK 293

Query: 541 PDEFTMVGLLMSCGRLSDKRLGKSIH 618
           PD+ T+V L+ +   +     G+ IH
Sbjct: 294 PDKVTIVNLISAVAEMGALDQGRWIH 319