BLASTX nr result

ID: Coptis25_contig00001008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001008
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...   155   6e-36
gb|AFP55540.1| hypothetical protein [Rosa rugosa]                     139   5e-31
ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...   124   2e-26
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26

>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score =  155 bits (392), Expect = 6e-36
 Identities = 101/223 (45%), Positives = 132/223 (59%), Gaps = 4/223 (1%)
 Frame = -3

Query: 660 WHIKGDLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFEL 481
           W     LD++ V  S Q+EG  S  KG  G +T+ KV+ISP  K +A LD TG LD+F+L
Sbjct: 246 WRRSSSLDLEPVC-STQVEGLYSKPKGYIGQITSSKVLISPHGKFVATLDLTGCLDIFKL 304

Query: 480 HEERSSLSIVDLSHSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDI 307
             E  SLS         SQ T   S    KF+  I DFTWWSD  L++AK SG V   DI
Sbjct: 305 DGECCSLSSFAYGMRNDSQETDNLSNEVGKFLNGIVDFTWWSDHTLVLAKRSGTVIMLDI 364

Query: 306 FTGKSLLEDDPKFCMLVLQRVQQCQGCVLLMELSPSEKVYPNVSP--EVVDDQDKRLIFQ 133
            +G  LL +DP + M VL+RVQQ QG   L+E + SE+ + N+S   E  D     L+ +
Sbjct: 365 LSGIKLLGNDPVYSMPVLERVQQFQGQFFLLESTSSEEKH-NISTHGETGDLHHIELVTE 423

Query: 132 DKFSQLDFCKLSWSLYSFLKKSVEEMYEILIANQQYQDALDFA 4
           D+ +Q D  +L WSL SF ++SV EMY ILI+N +YQ AL+FA
Sbjct: 424 DRLNQADIARLQWSLISFSERSVPEMYNILISNTKYQAALEFA 466


>gb|AFP55540.1| hypothetical protein [Rosa rugosa]
          Length = 2445

 Score =  139 bits (350), Expect = 5e-31
 Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 2/221 (0%)
 Frame = -3

Query: 660 WHIKGDLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFEL 481
           W   G +D++ + F+ Q +GF S        L  PKV+ISPQ+K +A LD TG L VF++
Sbjct: 242 WRRSGIIDLEQL-FTIQFDGFYSKPIALGSQLAYPKVLISPQAKFVATLDLTGRLHVFKM 300

Query: 480 HEERSSLSIVDLSHSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDI 307
            +ER SLS         SQ T   S G+ K + DI DFTWWSD +L  AK SG V   D+
Sbjct: 301 DKERFSLSKFTCRERYESQVTNNLSSGEGKELIDIVDFTWWSDHILTFAKRSGLVTMLDL 360

Query: 306 FTGKSLLEDDPKFCMLVLQRVQQCQGCVLLMELSPSEKVYPNVSPEVVDDQDKRLIFQDK 127
            +G  + E+   +   VL+R++  QG + L+E   S++   + S E  D      I  D 
Sbjct: 361 LSGLEVEENGTVYSKPVLERIKLFQGNLFLLETLTSDE--RSSSDETKDSHTMEWITMDS 418

Query: 126 FSQLDFCKLSWSLYSFLKKSVEEMYEILIANQQYQDALDFA 4
             Q+D  +L+WSL SF ++SV EMY IL+ N++YQ AL+FA
Sbjct: 419 LDQIDISRLNWSLVSFSERSVVEMYNILLRNKKYQAALEFA 459


>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
           predicted protein [Populus trichocarpa]
          Length = 2414

 Score =  130 bits (327), Expect = 2e-28
 Identities = 87/222 (39%), Positives = 123/222 (55%), Gaps = 2/222 (0%)
 Frame = -3

Query: 660 WHIKGDLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFEL 481
           W    +LD++ +  S Q EG  S  K  +  L+ PKV+ISPQ K +A LD TG L +F++
Sbjct: 246 WCRSRNLDLEPL-ISIQFEGLYSKSK--DAILSCPKVLISPQGKFVATLDITGRLHIFKM 302

Query: 480 HEERSSLSIVDLSHSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSGVDDP-DI 307
            +E  SL          SQ T+  + G+ + + DI DFTWWSDR++ +AK  G+    DI
Sbjct: 303 DKESRSLVSFACEEQLRSQGTSNITNGQNELLNDIVDFTWWSDRIMTLAKRGGILAMLDI 362

Query: 306 FTGKSLLEDDPKFCMLVLQRVQQCQGCVLLMELSPSEKVYPNVSPEVVDDQDKRLIFQDK 127
            TG    E +  + MLVL R+QQ QG + +++     KV      E  +  +   +   +
Sbjct: 363 VTGLKFQEHNHLYSMLVLDRIQQFQGRIFVLD----SKVPSKPHRESGNVYNVEQVTGSR 418

Query: 126 FSQLDFCKLSWSLYSFLKKSVEEMYEILIANQQYQDALDFAH 1
             QLD   L WSL S  K+SV EMY ILI+N +YQ ALDFA+
Sbjct: 419 SDQLDVSHLHWSLISLSKRSVPEMYNILISNCKYQAALDFAN 460


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
           gi|223545226|gb|EEF46735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2429

 Score =  124 bits (311), Expect = 2e-26
 Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 4/224 (1%)
 Frame = -3

Query: 660 WHIKGDLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFEL 481
           W    ++D++L+S S Q EG     K   G +  PKV++SP+   +A LD +G L +F+L
Sbjct: 253 WRRCPNVDLELLS-SVQFEGLYHKSKDFLGQIAYPKVLMSPEGNFVATLDISGCLYIFKL 311

Query: 480 HEERSSLSIVDLSHSGLSQTAKCSIGKRK-FVKDITDFTWWSDRVLIIAKVSGVDDP-DI 307
            +E+SSLS + +     SQ       + K F+ D  DFTWWSD ++ +A+  GV    +I
Sbjct: 312 DKEQSSLSSIAVGGRFGSQVIDNLTNRHKEFLNDNIDFTWWSDHIVTLARRGGVFTMLNI 371

Query: 306 FTGKSLLEDDPKFCMLVLQRVQQCQGCVLLMELSPSE--KVYPNVSPEVVDDQDKRLIFQ 133
             G  L + D  + M VL RVQ+ QG + L+E    E  K   N + E         + +
Sbjct: 372 LAGLQLQKSDHIYSMPVLDRVQKLQGHLFLVESKSFEEGKSLYNHNGESTGVHLLEQVKE 431

Query: 132 DKFSQLDFCKLSWSLYSFLKKSVEEMYEILIANQQYQDALDFAH 1
              +Q DF KL W L S  ++SV EMY++LI+N +YQ ALDFA+
Sbjct: 432 GTSNQHDFSKLRWRLVSISQRSVSEMYDVLISNHKYQAALDFAN 475


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
           predicted protein [Populus trichocarpa]
          Length = 2421

 Score =  124 bits (311), Expect = 2e-26
 Identities = 82/209 (39%), Positives = 113/209 (54%), Gaps = 2/209 (0%)
 Frame = -3

Query: 621 FSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEE-RSSLSIVDL 445
           FS Q EG  S  K  +  L  PKV+ISP  K +A LD +G L +F++ +E RS L     
Sbjct: 278 FSIQFEGLYSKSK--DAILACPKVLISPLGKFVATLDISGCLHIFKMDKESRSLLIFAGE 335

Query: 444 SHSGLSQTAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSLLEDDPKF 268
              G   T+  + G+ + + D+ DFTWWSD ++ IAK  G V   DI TG    EDD  +
Sbjct: 336 EKLGSQGTSNLTNGQNELLSDVVDFTWWSDHIMTIAKRGGTVTMLDIVTGLKFQEDDHLY 395

Query: 267 CMLVLQRVQQCQGCVLLMELSPSEKVYPNVSPEVVDDQDKRLIFQDKFSQLDFCKLSWSL 88
            ++VL R+QQ QG + +++     K+  N S E             +  Q D  +L WSL
Sbjct: 396 SIIVLDRIQQFQGHIFVLD----SKIPSNHSRE-----------SGRSDQFDVSQLHWSL 440

Query: 87  YSFLKKSVEEMYEILIANQQYQDALDFAH 1
            S  K SV EMY ILI++ +YQ ALDFA+
Sbjct: 441 ISLSKISVPEMYHILISSLKYQAALDFAN 469


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