BLASTX nr result

ID: Coptis25_contig00001005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001005
         (2062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528608.1| conserved hypothetical protein [Ricinus comm...   118   7e-24
ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-23
gb|ABK95138.1| unknown [Populus trichocarpa]                          117   1e-23
ref|XP_003547556.1| PREDICTED: uncharacterized protein LOC100791...   115   3e-23
ref|XP_003532981.1| PREDICTED: uncharacterized protein LOC100793...   115   3e-23

>ref|XP_002528608.1| conserved hypothetical protein [Ricinus communis]
           gi|223531953|gb|EEF33766.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  118 bits (295), Expect = 7e-24
 Identities = 61/73 (83%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -3

Query: 644 KDTTPLAGSSVGAIVCAIIASGSSMKEAVEATKVLAEDCRLIGTAFRLGAVLRE-LVKFL 468
           K+TTPLAGSS GAIVCA+IASG+SM EA+EATKVLAEDCRL GTAFRLGAVLR+ L KFL
Sbjct: 183 KETTPLAGSSAGAIVCAVIASGASMHEALEATKVLAEDCRLRGTAFRLGAVLRDVLEKFL 242

Query: 467 PDDVHTRSNGRVR 429
           PDD H RSNGRVR
Sbjct: 243 PDDAHIRSNGRVR 255


>ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|222845439|gb|EEE82986.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  117 bits (293), Expect = 1e-23
 Identities = 61/73 (83%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -3

Query: 644 KDTTPLAGSSVGAIVCAIIASGSSMKEAVEATKVLAEDCRLIGTAFRLGAVLRE-LVKFL 468
           K+TTPLAGSS GAIVCA+IASG+SM EA+ ATKVLAEDCRL GTAFRLGAVLR+ L KFL
Sbjct: 143 KETTPLAGSSAGAIVCAVIASGASMHEALTATKVLAEDCRLKGTAFRLGAVLRDVLEKFL 202

Query: 467 PDDVHTRSNGRVR 429
           PDDVH RSNGRVR
Sbjct: 203 PDDVHIRSNGRVR 215


>gb|ABK95138.1| unknown [Populus trichocarpa]
          Length = 416

 Score =  117 bits (293), Expect = 1e-23
 Identities = 61/73 (83%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -3

Query: 644 KDTTPLAGSSVGAIVCAIIASGSSMKEAVEATKVLAEDCRLIGTAFRLGAVLRE-LVKFL 468
           K+TTPLAGSS GAIVCA+IASG+SM EA+ ATKVLAEDCRL GTAFRLGAVLR+ L KFL
Sbjct: 191 KETTPLAGSSAGAIVCAVIASGASMHEALTATKVLAEDCRLKGTAFRLGAVLRDVLEKFL 250

Query: 467 PDDVHTRSNGRVR 429
           PDDVH RSNGRVR
Sbjct: 251 PDDVHIRSNGRVR 263


>ref|XP_003547556.1| PREDICTED: uncharacterized protein LOC100791724 [Glycine max]
          Length = 383

 Score =  115 bits (289), Expect = 3e-23
 Identities = 58/73 (79%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
 Frame = -3

Query: 644 KDTTPLAGSSVGAIVCAIIASGSSMKEAVEATKVLAEDCRLIGTAFRLGAVLRELV-KFL 468
           K+TTPLAGSS GAIVCA+IASG+SM+EA+ ATK+LAEDCR  GTAFRLGAVLR+++ KFL
Sbjct: 160 KETTPLAGSSAGAIVCAVIASGASMEEALNATKILAEDCRNRGTAFRLGAVLRDILDKFL 219

Query: 467 PDDVHTRSNGRVR 429
           PDDVH RSNGRVR
Sbjct: 220 PDDVHIRSNGRVR 232


>ref|XP_003532981.1| PREDICTED: uncharacterized protein LOC100793123 [Glycine max]
          Length = 392

 Score =  115 bits (289), Expect = 3e-23
 Identities = 58/73 (79%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
 Frame = -3

Query: 644 KDTTPLAGSSVGAIVCAIIASGSSMKEAVEATKVLAEDCRLIGTAFRLGAVLRELV-KFL 468
           K+TTPLAGSS GAIVCA+IASG+SM+EA+ ATK+LAEDCR  GTAFRLGAVLR+++ KFL
Sbjct: 169 KETTPLAGSSAGAIVCAVIASGASMEEALNATKILAEDCRNQGTAFRLGAVLRDILDKFL 228

Query: 467 PDDVHTRSNGRVR 429
           PDDVH RSNGRVR
Sbjct: 229 PDDVHIRSNGRVR 241


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