BLASTX nr result

ID: Coptis25_contig00000484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000484
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like...   189   4e-46
ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vit...   186   2e-45
ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group] g...   185   5e-45
ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [S...   184   1e-44
ref|XP_003630655.1| 40S ribosomal protein S15a-5 [Medicago trunc...   184   1e-44

>ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like [Brachypodium
           distachyon]
          Length = 129

 Score =  189 bits (479), Expect = 4e-46
 Identities = 90/115 (78%), Positives = 106/115 (92%)
 Frame = +1

Query: 253 MGRRILNDALRTMVNAERRGKATANLQPVSNAIAAFLKIMKNRGYIKDYQVADMNRVGKI 432
           MGRRILNDALRTMVNAERRGKATA LQP+S  + +FL IMK+RGYIK+++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGKATACLQPISGVMISFLNIMKHRGYIKNFEVFDPHRVGKI 60

Query: 433 TVELQGRIKDCRALTYRQDLKAKEIDEFKICTLPTRQWGYVVITTPNGVLDHEEA 597
           TVELQGRIKDC+ALTYRQDL++KEI++++I  LPTRQWGYVV+TTPNGVLDHEEA
Sbjct: 61  TVELQGRIKDCKALTYRQDLRSKEIEQYRIRMLPTRQWGYVVVTTPNGVLDHEEA 115


>ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vitis vinifera]
           gi|147768437|emb|CAN69268.1| hypothetical protein
           VITISV_043644 [Vitis vinifera]
           gi|297743113|emb|CBI35980.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/115 (79%), Positives = 102/115 (88%)
 Frame = +1

Query: 253 MGRRILNDALRTMVNAERRGKATANLQPVSNAIAAFLKIMKNRGYIKDYQVADMNRVGKI 432
           MGRRILNDALRTMVNAERRG A A+LQP+S  + +FLKIMK+ GYIKD+QV D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGMAKAHLQPISTVMTSFLKIMKDHGYIKDFQVYDPHRVGKI 60

Query: 433 TVELQGRIKDCRALTYRQDLKAKEIDEFKICTLPTRQWGYVVITTPNGVLDHEEA 597
           TVELQGRI DCRALTYRQDLKAK+I+++    LPTRQWGYVVITTPNGVLDHEEA
Sbjct: 61  TVELQGRINDCRALTYRQDLKAKDIEKYTANKLPTRQWGYVVITTPNGVLDHEEA 115


>ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group]
           gi|50251667|dbj|BAD29691.1| putative 40S ribosomal
           protein S15A [Oryza sativa Japonica Group]
           gi|113535993|dbj|BAF08376.1| Os02g0255200 [Oryza sativa
           Japonica Group] gi|125538846|gb|EAY85241.1| hypothetical
           protein OsI_06614 [Oryza sativa Indica Group]
           gi|125581523|gb|EAZ22454.1| hypothetical protein
           OsJ_06122 [Oryza sativa Japonica Group]
           gi|215768335|dbj|BAH00564.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 129

 Score =  185 bits (470), Expect = 5e-45
 Identities = 88/115 (76%), Positives = 103/115 (89%)
 Frame = +1

Query: 253 MGRRILNDALRTMVNAERRGKATANLQPVSNAIAAFLKIMKNRGYIKDYQVADMNRVGKI 432
           MGRRILNDALRTMVNAERRGKATA LQP+S  + +FL IMK+RGYIK ++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGKATALLQPISGVMVSFLNIMKHRGYIKKFEVIDPHRVGKI 60

Query: 433 TVELQGRIKDCRALTYRQDLKAKEIDEFKICTLPTRQWGYVVITTPNGVLDHEEA 597
            VEL GRIKDC+ALTYRQD++AKEI+++++  LPTRQWGYVVITTPNGVLDHEEA
Sbjct: 61  NVELHGRIKDCKALTYRQDIRAKEIEQYRVRMLPTRQWGYVVITTPNGVLDHEEA 115


>ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [Sorghum bicolor]
           gi|241919010|gb|EER92154.1| hypothetical protein
           SORBIDRAFT_01g032870 [Sorghum bicolor]
          Length = 129

 Score =  184 bits (466), Expect = 1e-44
 Identities = 87/115 (75%), Positives = 103/115 (89%)
 Frame = +1

Query: 253 MGRRILNDALRTMVNAERRGKATANLQPVSNAIAAFLKIMKNRGYIKDYQVADMNRVGKI 432
           MGRRILNDALRTMVNA+RRG ATA LQP+S  + +FL IMK+RGYIK+++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNADRRGNATALLQPISGVMVSFLNIMKHRGYIKNFEVIDPHRVGKI 60

Query: 433 TVELQGRIKDCRALTYRQDLKAKEIDEFKICTLPTRQWGYVVITTPNGVLDHEEA 597
            VEL GRIKDC+ALTYRQDL+AKEI+++++  LPTRQWGYVVITTPNGVLDHEEA
Sbjct: 61  NVELHGRIKDCKALTYRQDLRAKEIEQYRVRMLPTRQWGYVVITTPNGVLDHEEA 115


>ref|XP_003630655.1| 40S ribosomal protein S15a-5 [Medicago truncatula]
           gi|217071420|gb|ACJ84070.1| unknown [Medicago
           truncatula] gi|355524677|gb|AET05131.1| 40S ribosomal
           protein S15a-5 [Medicago truncatula]
           gi|388507250|gb|AFK41691.1| unknown [Medicago
           truncatula]
          Length = 129

 Score =  184 bits (466), Expect = 1e-44
 Identities = 87/115 (75%), Positives = 104/115 (90%)
 Frame = +1

Query: 253 MGRRILNDALRTMVNAERRGKATANLQPVSNAIAAFLKIMKNRGYIKDYQVADMNRVGKI 432
           MGRRILNDALR+MVNAE+RGKA   L+P+SN I++FL IMK+RGYIKD+QV D +RVG+I
Sbjct: 1   MGRRILNDALRSMVNAEKRGKAMVELKPISNVISSFLHIMKHRGYIKDFQVYDPHRVGRI 60

Query: 433 TVELQGRIKDCRALTYRQDLKAKEIDEFKICTLPTRQWGYVVITTPNGVLDHEEA 597
           TVELQGRI DC+ALTYRQDLKAK+I+ +++ TLPT QWGYVVITTP+GVLDHEEA
Sbjct: 61  TVELQGRINDCKALTYRQDLKAKDIEAYRLNTLPTHQWGYVVITTPDGVLDHEEA 115