BLASTX nr result

ID: Coptis25_contig00000460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000460
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264588.1| PREDICTED: NAC domain-containing protein 29 ...   284   3e-74
gb|AEI72272.1| NAC domain transcription factor [Citrus trifoliata]    283   5e-74
ref|XP_002512632.1| NAC domain-containing protein, putative [Ric...   280   3e-73
ref|XP_002297860.1| NAC domain protein, IPR003441 [Populus trich...   280   4e-73
ref|XP_002304662.1| NAC domain protein, IPR003441 [Populus trich...   280   4e-73

>ref|XP_002264588.1| PREDICTED: NAC domain-containing protein 29 isoform 1 [Vitis
           vinifera] gi|296088719|emb|CBI38169.3| unnamed protein
           product [Vitis vinifera]
          Length = 251

 Score =  284 bits (726), Expect = 3e-74
 Identities = 153/239 (64%), Positives = 176/239 (73%), Gaps = 12/239 (5%)
 Frame = +1

Query: 196 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFACPLPASIIHEVNVCKYDPWDL 375
           MEK   V+NGV+ RLPPGFRFHPTDEELVVQYLKRKA++CPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLNFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKAYSCPLPASIIPEVDVCKADPWDL 59

Query: 376 PAGDWEKEKYFFSNRVAKYLNGNRCNRATGSGYWKATGIDKQIVASRSNQAVGMKKTLVF 555
           P GD E+E+YFFS R AKY NGNR NRAT SGYWKATGIDKQIVAS+ NQ VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATVSGYWKATGIDKQIVASKGNQVVGMKKTLVF 118

Query: 556 YRGKPTKGSKTDWIMHEYRLMGA--CPQTKNS-TQNSTVHTEDWVLCRVFLKKRVAKNEN 726
           YRGKP  GS+TDWIMHEYRL+GA   PQ K+S TQ+S    E+WVLCR+FLKKR  KN+ 
Sbjct: 119 YRGKPPHGSRTDWIMHEYRLVGAETTPQRKSSTTQSSMAQAENWVLCRIFLKKRGTKNDE 178

Query: 727 EDAQQCTDNKV-------KPRFINFMMQDNTD-KCPXXXXXXXXGITEVRSVGS-DHEE 876
           E  Q   +N+V       +P F +F+ +   D            GITEV +  S +HEE
Sbjct: 179 EMMQTNNENRVVQKLRSSRPVFYDFLTRGRDDTNLASSNSSGSSGITEVSNTESEEHEE 237


>gb|AEI72272.1| NAC domain transcription factor [Citrus trifoliata]
          Length = 249

 Score =  283 bits (724), Expect = 5e-74
 Identities = 153/239 (64%), Positives = 174/239 (72%), Gaps = 12/239 (5%)
 Frame = +1

Query: 196 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFACPLPASIIHEVNVCKYDPWDL 375
           MEK   ++NGV+ RLPPGFRFHPTDEELVVQYLKRK FACPLPASII EV+VCK DPWDL
Sbjct: 1   MEKIDFMKNGVL-RLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDL 59

Query: 376 PAGDWEKEKYFFSNRVAKYLNGNRCNRATGSGYWKATGIDKQIVASRSNQAVGMKKTLVF 555
           P GD  +E+YFFS R AKY NGNR NRATGSGYWKATG+DKQI  SR NQ VGMKKTLVF
Sbjct: 60  P-GDVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVF 118

Query: 556 YRGKPTKGSKTDWIMHEYRLMGA--CPQTKNSTQNSTVHTEDWVLCRVFLKKRVAKNENE 729
           YRGKP  GS+TDWIMHEYRL+ A   PQ KN  Q   V T++WVLCR+FLKKR AK+E+E
Sbjct: 119 YRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSEDE 178

Query: 730 DAQQCTD------NKVKPRFINFMMQD---NTDKCPXXXXXXXXGITEVRSVGS-DHEE 876
           +   CT       N  KP F +FM ++   + +  P        G+TEV S  S DHEE
Sbjct: 179 ET--CTKIGGTRANGPKPVFYDFMRKEERADLNLVPTSSSSGSSGVTEVSSNESDDHEE 235


>ref|XP_002512632.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223548593|gb|EEF50084.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 254

 Score =  280 bits (717), Expect = 3e-73
 Identities = 151/242 (62%), Positives = 173/242 (71%), Gaps = 15/242 (6%)
 Frame = +1

Query: 196 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFACPLPASIIHEVNVCKYDPWDL 375
           ME+   V+NGV+ RLPPGFRFHPTDEELVVQYLKRK F+CPLPASII EV+VCK DPWDL
Sbjct: 1   MERLNFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKVFSCPLPASIIPEVDVCKSDPWDL 59

Query: 376 PAGDWEKEKYFFSNRVAKYLNGNRCNRATGSGYWKATGIDKQIVASRSNQAVGMKKTLVF 555
           P GD E+E+YFFS R AKY NGNR NRAT SGYWKATGIDK+IV S+ NQ VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATSSGYWKATGIDKEIVTSKGNQLVGMKKTLVF 118

Query: 556 YRGKPTKGSKTDWIMHEYRLM----GAC--PQTKNSTQNSTVHTEDWVLCRVFLKKRVAK 717
           YRGKP  G++TDWIMHEYRL+     AC  PQ KN  Q+     ++WVLCR+FLKKR  K
Sbjct: 119 YRGKPPHGTRTDWIMHEYRLVSPQTAACNSPQKKNPIQSPLGAMDNWVLCRIFLKKRSNK 178

Query: 718 NENEDAQQCTDNKV------KPRFINFMMQDNTD--KCPXXXXXXXXGITEVRSVGS-DH 870
           NE ++     +N+V      KP F  F+ +D TD    P        GITEV S  S DH
Sbjct: 179 NEEDNLHIGNENRVCKLRNTKPVFYEFLTKDRTDLNLAPCSSSSGSSGITEVSSNESDDH 238

Query: 871 EE 876
           EE
Sbjct: 239 EE 240


>ref|XP_002297860.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222845118|gb|EEE82665.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 257

 Score =  280 bits (716), Expect = 4e-73
 Identities = 154/245 (62%), Positives = 175/245 (71%), Gaps = 18/245 (7%)
 Frame = +1

Query: 196 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFACPLPASIIHEVNVCKYDPWDL 375
           MEK + V+NGV+ RLPPGFRFHPTDEELVVQYLKRK FACPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLSFVKNGVL-RLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 376 PAGDWEKEKYFFSNRVAKYLNGNRCNRATGSGYWKATGIDKQIVASRSNQAVGMKKTLVF 555
           P GD E+E+YFFS R AKY NGNR NRATGSGYWKATGIDKQIV S+ +Q VGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGHQVVGMKKTLVF 118

Query: 556 YRGKPTKGSKTDWIMHEYRLMG----ACP--QTKNSTQNS-TVHTEDWVLCRVFLKKRVA 714
           YRGKP  G++TDWIMHEYRL      AC   + KNSTQ    V  E+WVLCR+FLKKR  
Sbjct: 119 YRGKPPHGTRTDWIMHEYRLASTETTACNTLKNKNSTQGPVVVPMENWVLCRIFLKKRGT 178

Query: 715 KNENEDAQQCTDNKV------KPRFINFMMQDNT---DKCPXXXXXXXXGITEVRSV--G 861
           KNE E+ Q   DN++      +P F +FM ++ T   +  P        GITE  S    
Sbjct: 179 KNEEENIQVGNDNRLPKLRATEPVFYDFMTKEKTTDLNLAPSSSSSGSSGITEEVSCNES 238

Query: 862 SDHEE 876
            DHEE
Sbjct: 239 DDHEE 243


>ref|XP_002304662.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842094|gb|EEE79641.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 255

 Score =  280 bits (716), Expect = 4e-73
 Identities = 155/243 (63%), Positives = 171/243 (70%), Gaps = 16/243 (6%)
 Frame = +1

Query: 196 MEKPTLVRNGVISRLPPGFRFHPTDEELVVQYLKRKAFACPLPASIIHEVNVCKYDPWDL 375
           MEK   V+NG + RLPPGFRFHPTDEELVVQYLKRK FACPLPASII EV+VCK DPWDL
Sbjct: 1   MEKLNFVKNGAV-RLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 376 PAGDWEKEKYFFSNRVAKYLNGNRCNRATGSGYWKATGIDKQIVASRSNQAVGMKKTLVF 555
           P GD E+E+YFFS R AKY NGNR NRATGSGYWKATGIDKQIV S+ NQAVGMKKTLVF
Sbjct: 60  P-GDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGNQAVGMKKTLVF 118

Query: 556 YRGKPTKGSKTDWIMHEYRL----MGACPQ--TKNSTQNS-TVHTEDWVLCRVFLKKRVA 714
           YRGKP  G++TDWIMHEYRL      AC     KNS Q S  V  E+WVLCR+FLKKR  
Sbjct: 119 YRGKPPHGTRTDWIMHEYRLASTETAACNALLNKNSIQGSVAVPMENWVLCRIFLKKRST 178

Query: 715 KNENEDAQQCTDNKV------KPRFINFMMQDNTD--KCPXXXXXXXXGITEVR-SVGSD 867
           KNE E+ Q   DN++      KP F +FM +  T              GITEV  +   D
Sbjct: 179 KNEEENMQFDNDNRLSKLRTTKPVFYDFMTKHRTTDLNLAPSSSSGSSGITEVSCNESDD 238

Query: 868 HEE 876
           HEE
Sbjct: 239 HEE 241


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