BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000437
         (1825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    82   6e-13
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               80   2e-12
ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    79   4e-12
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               77   2e-11
ref|NP_173374.1| FBD / Leucine Rich Repeat domains containing pr...    72   5e-10

>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
            gi|222858320|gb|EEE95867.1| f-box family protein [Populus
            trichocarpa]
          Length = 511

 Score = 81.6 bits (200), Expect = 6e-13
 Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 30/348 (8%)
 Frame = -3

Query: 1400 NVQEIHLKLSS----ELPQCIFNWKSLRVLKLKG-VDGFLWLRNP-HSVDLPLLKSLHLT 1239
            NVQE+ +++++      P+ +   +SLRVLKL+    GF  L +   ++  P L +L L+
Sbjct: 133  NVQELDVEVATGDYFNFPRGVITSESLRVLKLRSRYPGFRLLPSSVMTIGFPSLHTLSLS 192

Query: 1238 RVVL-DMTLVNDCL--SKCPALEVLSLKCCEFMH--------LEDLIVSSP-QLKKLVII 1095
             V+L + + + D    S  P L+ L+L  C  M         LEDL + +  QL  L I 
Sbjct: 193  LVILYEQSSLLDLFTESSFPCLKNLNLDACFGMKHLKVCCRALEDLTIENCFQLHSLDIC 252

Query: 1094 TYDQNY----GCFKHYDTKIW----APKLTFLKVR-DYISKRFSLDNLSSLESAVIDLKV 942
            +          CF  Y  K W    AP+L  +    + I+   SL NL+SL  A +   +
Sbjct: 253  SAKLENLRVASCFDAYSDKTWFKVNAPRLRGISWEYNSITASSSLVNLTSLHEASVGFSL 312

Query: 941  NEHFVPLGTKQENAKRVIQVLEGLCHXXXXXXXXXXXEMFSSALKIQRMSSQFSNLRHFK 762
                + +    E  + V   L GL H           E+ S+   I  +   F+NL+  +
Sbjct: 313  LHENLSV----EKLQSVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPFNNLKVLE 368

Query: 761  LTSS--PNDACDLLQLLMDSPNIKTLLLKMTWTNFNSYQGRLYWDEPSFYSTIMEANWEE 588
            L +    N+   L  L   SP + TL+LK+   +F + + +   D     ++  E  WE 
Sbjct: 369  LHTGFEKNNVPGLAFLFRSSPTLHTLILKII-NDFKTERRQWNRDLWDLSTSAEEQYWES 427

Query: 587  WLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIKIVLA 447
             LQ  +  L+HL+ V+I  FL CENEV L   LL+    L+++ +  A
Sbjct: 428  QLQALRPFLDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTLCTA 475


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
 Frame = -3

Query: 1619 QSEDIISNLNEDVILYILSFLDIKAAVVTXXXXXXXXXXXXXXRVLNFDQRFYPWFKKYP 1440
            +S DIISNL ++++ +ILSFL  K AV T               +L+FD     W     
Sbjct: 7    ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDEL--WLNPST 64

Query: 1439 FKNSLDKVI-------NVLRNVQEIHLK-------------LSSELPQCIFNWKSLRVLK 1320
                 +++I        VLR+ +   +K                ELP   F  K+L V+K
Sbjct: 65   LVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDNWGVELPPMFFICKTLVVVK 124

Query: 1319 LKGVDGFLWLRNPHSVDLPLLKSLHLTRV-VLDMTLVNDCLSKCPALEVLSLKCCEFMHL 1143
            L      L+L  P +V LP LK+LHL  V   D   +   LS CP LE L ++  E  + 
Sbjct: 125  LSCA---LFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQ 181

Query: 1142 EDLIVSSPQLKKLVIITYDQNYGC-----FKHYDTKIWAPKLTFLKVRDYISKRFSLDNL 978
              + VS+P LK L I  +   +        + Y   + AP L +L + DY+SK + + +L
Sbjct: 182  WVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDL 241

Query: 977  SSLESAVIDLK 945
             SL  A ID++
Sbjct: 242  PSLVKAFIDVE 252


>ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
            [Vitis vinifera]
          Length = 513

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 96/359 (26%), Positives = 161/359 (44%), Gaps = 43/359 (11%)
 Frame = -3

Query: 1409 VLRNVQEIHLKLSSE----LPQCIFNWKSLRVLKLK-GVDGFLWLRNPHSVDL----PLL 1257
            +  NVQ++ + + ++    LP+C+   +SL+ L LK    GF   R P S+ +      L
Sbjct: 134  IRHNVQDLDIDVCTDDYFNLPRCVVMSESLKALSLKFRPPGF---RLPPSMVMRGGFQSL 190

Query: 1256 KSLHLTRVV-------LDM-------TLVNDCLSKCPALEVLSLKCCEFM--------HL 1143
            ++L L+ +V       LD+        L    L  C  ++ L + C             L
Sbjct: 191  QTLSLSHMVFYKKHYLLDLFAGSAFPVLRKLTLDSCRGIKFLDVGCRVLQDLTVENCFQL 250

Query: 1142 EDLIVSSPQLKKLVIITYDQNYGCFKHYDTKIW----APKLTFLK-VRDYISKRFSLDNL 978
              L VS P+L++L +++      CF+    K W    AP+L  +    + I++   L+NL
Sbjct: 251  HGLTVSGPRLERLRVVS------CFESSSEKSWVKIIAPRLRVMHWEHNAITETSCLENL 304

Query: 977  SSLESAVIDLKVNEHFVPLGTKQENAKRVIQVLEGLCHXXXXXXXXXXXEMFSSALKIQR 798
            +S+E A I     +      T+ E  K V  +L GL H           ++ S+      
Sbjct: 305  ASMEEAFIGFFALDE----DTRAEKYKSVSNILSGLSHAHCLTLQSQCIQILSNNHYSTI 360

Query: 797  MSSQFSNLRHFKLTS--SPNDACDLLQLLMDSPNIKTLLLKMTWTNFNSYQGRLY----W 636
                F NL+  KL +    N+   LL L   SP + TL+LK+  T+F + + + +    W
Sbjct: 361  SLHPFHNLKTMKLHTVLDKNNIRGLLCLFRSSPTLHTLILKII-THFKAEKTKAWNKALW 419

Query: 635  DEPSFYSTIMEANWEEWLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKI 462
            D  S  S+  E  WE   Q F+  L+HL+ V +   +  ENE+ L+  LL+   AL+++
Sbjct: 420  DHMS--SSEQEQYWESRSQTFKSFLQHLKVVRMEGLVESENEIGLIKFLLKHGMALQEM 476


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 110/435 (25%), Positives = 176/435 (40%), Gaps = 16/435 (3%)
 Frame = -3

Query: 1622 GQSEDIISNLNEDVILYILSFLDIKAAVVTXXXXXXXXXXXXXXRVLNFDQRFY------ 1461
            G+S D ISNL + V+ +I+SFL  K AV T                L+FD          
Sbjct: 6    GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKP 65

Query: 1460 --PWFKKYPFKNSLDKVI--NVLRNVQEIHLKLSS-ELPQCIFNWKSLRVLKLKGVDGFL 1296
                 +   FKN +DKV+    +  +++  LK S  EL   + +W     L+    +  L
Sbjct: 66   IGDSERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSW-ICTALERNVQELDL 124

Query: 1295 WLRNPHSVDLPLLKSLHLTRVVLDMTLVNDCLSKCPALEVLSLKCCEFMHLEDLIVSSPQ 1116
            +    + ++LP       T VVL +         CP LE L ++           VS+P 
Sbjct: 125  YFDTEYPIELPPKFFFCKTLVVLKL---------CPVLEELVIERWRLDEQWVFNVSAPT 175

Query: 1115 LKKLVIITYDQNYGCFKHYDTKIWAPKLTFLKVRDYISKRFSLDNLSSLESAVIDLKVNE 936
            LK L I         F  Y   + AP L +L + D++S+ + + NLSSL  A ++  V  
Sbjct: 176  LKSLAIY--------FSKYKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVN--VGP 225

Query: 935  HFVPLGTKQENAKRVIQVLEGLCHXXXXXXXXXXXEMFSSALKIQRMSSQFSNLRHFKLT 756
                +  +     R+ ++L G+ +              S       + + F ++   +L 
Sbjct: 226  TIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYELPA-FHSVTRLELE 284

Query: 755  SSPNDACDLLQLLMD-SPNIKTLLLKMTWTNFNSYQGRLYWDEPSFYSTIMEANWEEW-L 582
                   + L+  +D SPN++ L+L+    N N                  E   EEW L
Sbjct: 285  VDYGYGLEFLKEFLDTSPNLEILILE----NVNK----------------DECEIEEWTL 324

Query: 581  QFQ---CLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIKIVLAQVWPHSREKMMW 411
              Q   C+  HL  VEI+ F G + E+  +  LL+ A  L+K+ I   + W   R+   +
Sbjct: 325  PLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSID-CRDW---RDGQEF 380

Query: 410  VVWKILQRVPRASQN 366
             V K L    RAS +
Sbjct: 381  CVCKKLSGFTRASMS 395


>ref|NP_173374.1| FBD / Leucine Rich Repeat domains containing protein [Arabidopsis
            thaliana] gi|332191729|gb|AEE29850.1| FBD / Leucine Rich
            Repeat domains containing protein [Arabidopsis thaliana]
          Length = 435

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
 Frame = -3

Query: 1337 SLRVLKLKGV----DGFLWLRNPHSVDLPLLKSLHLTRVV-LDMTLVNDCLSKCPALEVL 1173
            SL+ L L+GV    + F  L   H+V  P LKSLHL  V+  D   +   L+ CP LE L
Sbjct: 125  SLKNLLLQGVRYVDESFQLLDESHTVCFPSLKSLHLKEVISSDERYLRSLLANCPVLEEL 184

Query: 1172 SLKCCEFMHLEDLIVSSPQLKKLVI-ITYDQNYGCFKHYDTKIWAPKLTFLKVRDYISKR 996
             ++  E+  L  + +  P LK L + I  D++         +I AP L ++K+ D+   +
Sbjct: 185  VMELDEYDTLGAVHIIVPSLKSLSLDIDCDRSSNV-----VEIVAPSLEYIKLNDHSDNK 239

Query: 995  FSLDNLSSLESAVIDLKVNEH--FVPLGTKQENAKRVIQVLEGLCHXXXXXXXXXXXEMF 822
            F ++N+  LE A ID  + E+  F+   T  +  +    ++ G                 
Sbjct: 240  FLIENMPKLEEAYIDANIFEYEKFLGAFTSVKRLRASPSIVSGRISGDG----------L 289

Query: 821  SSALKIQRMSSQ------FSNLRHFKL-TSSPNDACDLLQLLMDSPNIKTLLL 684
            +  L +QR  ++      F+ L   K+ T  P  +  LL+LL  SPN+K L L
Sbjct: 290  NLCLMLQRSEARNVSAICFNQLESLKICTCKPYWSIILLRLLKGSPNLKVLEL 342