BLASTX nr result

ID: Coptis25_contig00000407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000407
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274756.1| PREDICTED: uncharacterized protein LOC100244...   319   1e-84
emb|CAN62363.1| hypothetical protein VITISV_031923 [Vitis vinifera]   317   3e-84
emb|CBI34816.3| unnamed protein product [Vitis vinifera]              291   3e-76
ref|XP_002273440.2| PREDICTED: uncharacterized protein LOC100262...   275   3e-71
emb|CBI38857.3| unnamed protein product [Vitis vinifera]              275   3e-71

>ref|XP_002274756.1| PREDICTED: uncharacterized protein LOC100244375 [Vitis vinifera]
          Length = 346

 Score =  319 bits (817), Expect = 1e-84
 Identities = 175/279 (62%), Positives = 201/279 (72%)
 Frame = +1

Query: 1   RGRPRKYGPDGAVSSLALSPVPISSSAPAGTSTPMTVDFTTEKRGRGRPAGSLNKHPKVD 180
           RGRPRKYGPDG V+ +ALSP PISSSAP     P  +DF+ EKRG+ RP GS +K  K++
Sbjct: 77  RGRPRKYGPDGTVT-MALSPKPISSSAPG----PPVIDFSVEKRGKIRPVGSASKS-KME 130

Query: 181 VVENLGNWVSCSVGANFMPHVITVAAGEDVTMKIISFSQQGPRAICILSANGVISNVTLR 360
           + ENLG WV+CSVGANF PH+ITV +GEDVTMKIISFSQQGPRAICILSANGVIS+VTLR
Sbjct: 131 L-ENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLR 189

Query: 361 QPDSSGGTLTYEGRFEILSLSGSFMPTEXXXXXXXXXXXXXXLASPDGRXXXXXXXXXXX 540
           QPDSSGGTLTYEGRFEILSLSGSFMP++              LASPDGR           
Sbjct: 190 QPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLV 249

Query: 541 XXTPVQVVVGSFLPCXXXXXXXXXXXXXSTSAAQVTQAIPISSAEMEEAYGGQAQRSSTT 720
             +PVQVVVGSFL                 SAA+ T A+PISS EMEE +GG  QR S T
Sbjct: 250 AASPVQVVVGSFLTGNQHEQKPKKQKIEPISAARPTAAVPISSLEMEEPFGGHGQRPSAT 309

Query: 721 PKPNLTATASFRGENWAPLHSMQESRNSATDINVSVPEG 837
           PKPNL+++ SFRG+NW+PL S  +SRN ATDINVS+P G
Sbjct: 310 PKPNLSSSTSFRGDNWSPLPS--DSRNKATDINVSLPGG 346


>emb|CAN62363.1| hypothetical protein VITISV_031923 [Vitis vinifera]
          Length = 457

 Score =  317 bits (813), Expect = 3e-84
 Identities = 174/277 (62%), Positives = 200/277 (72%)
 Frame = +1

Query: 1   RGRPRKYGPDGAVSSLALSPVPISSSAPAGTSTPMTVDFTTEKRGRGRPAGSLNKHPKVD 180
           RGRPRKYGPDG V+ +ALSP PISSSAP     P  +DF+ EKRG+ RP GS +K  K++
Sbjct: 77  RGRPRKYGPDGTVT-MALSPKPISSSAPG----PPVIDFSVEKRGKIRPVGSASKS-KME 130

Query: 181 VVENLGNWVSCSVGANFMPHVITVAAGEDVTMKIISFSQQGPRAICILSANGVISNVTLR 360
           + ENLG WV+CSVGANF PH+ITV +GEDVTMKIISFSQQGPRAICILSANGVIS+VTLR
Sbjct: 131 L-ENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLR 189

Query: 361 QPDSSGGTLTYEGRFEILSLSGSFMPTEXXXXXXXXXXXXXXLASPDGRXXXXXXXXXXX 540
           QPDSSGGTLTYEGRFEILSLSGSFMP++              LASPDGR           
Sbjct: 190 QPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLV 249

Query: 541 XXTPVQVVVGSFLPCXXXXXXXXXXXXXSTSAAQVTQAIPISSAEMEEAYGGQAQRSSTT 720
             +PVQVVVGSFL                 SAA+ T A+PISS EMEE +GG  QR S T
Sbjct: 250 AASPVQVVVGSFLTGNQHEQKPKKQKIEPISAARPTAAVPISSLEMEEPFGGHGQRPSAT 309

Query: 721 PKPNLTATASFRGENWAPLHSMQESRNSATDINVSVP 831
           PKPNL+++ SFRG+NW+PL S  +SRN ATDINVS+P
Sbjct: 310 PKPNLSSSTSFRGDNWSPLPS--DSRNKATDINVSLP 344


>emb|CBI34816.3| unnamed protein product [Vitis vinifera]
          Length = 261

 Score =  291 bits (745), Expect = 3e-76
 Identities = 166/279 (59%), Positives = 191/279 (68%)
 Frame = +1

Query: 1   RGRPRKYGPDGAVSSLALSPVPISSSAPAGTSTPMTVDFTTEKRGRGRPAGSLNKHPKVD 180
           RGRPRKYGPDG V+ +ALSP PISSSAP     P  +DF+ EKRG+ RP GS +K  K++
Sbjct: 8   RGRPRKYGPDGTVT-MALSPKPISSSAPG----PPVIDFSVEKRGKIRPVGSASKS-KME 61

Query: 181 VVENLGNWVSCSVGANFMPHVITVAAGEDVTMKIISFSQQGPRAICILSANGVISNVTLR 360
           + ENLG WV+CSVGANF PH+ITV +GEDVTMKIISFSQQGPRAICILSANGVIS+VTLR
Sbjct: 62  L-ENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLR 120

Query: 361 QPDSSGGTLTYEGRFEILSLSGSFMPTEXXXXXXXXXXXXXXLASPDGRXXXXXXXXXXX 540
           QPDSSGGTLTYEGRFEILSLSGSFMP++              LASPDGR           
Sbjct: 121 QPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLV 180

Query: 541 XXTPVQVVVGSFLPCXXXXXXXXXXXXXSTSAAQVTQAIPISSAEMEEAYGGQAQRSSTT 720
             +PVQVVVGSFL                 SAA+ T A+PI                STT
Sbjct: 181 AASPVQVVVGSFLTGNQHEQKPKKQKIEPISAARPTAAVPI----------------STT 224

Query: 721 PKPNLTATASFRGENWAPLHSMQESRNSATDINVSVPEG 837
           PKPNL+++ SFRG+NW+PL S  +SRN ATDINVS+P G
Sbjct: 225 PKPNLSSSTSFRGDNWSPLPS--DSRNKATDINVSLPGG 261


>ref|XP_002273440.2| PREDICTED: uncharacterized protein LOC100262627 [Vitis vinifera]
          Length = 328

 Score =  275 bits (702), Expect = 3e-71
 Identities = 154/284 (54%), Positives = 184/284 (64%), Gaps = 5/284 (1%)
 Frame = +1

Query: 1   RGRPRKYGPDGAVSSLALSPVPISSSAPAGTSTPMTVDFTTEKRGRGRPAGSLNKHPKVD 180
           RGRPRKY PDG ++S+ LSP+PISSSAP      ++ +F++ KRGRGRP GS +K  +  
Sbjct: 52  RGRPRKYQPDG-MASMTLSPMPISSSAP------LSGNFSSGKRGRGRPVGSESKQKQKV 104

Query: 181 VVENLGNWVSCSVGANFMPHVITVAAGEDVTMKIISFSQQGPRAICILSANGVISNVTLR 360
             EN GNW + S G NF PH+ITV AGEDVTMK+ISFSQQGPRA+CILSANGVISNVTLR
Sbjct: 105 GSENSGNWSAISDGVNFTPHIITVNAGEDVTMKLISFSQQGPRAVCILSANGVISNVTLR 164

Query: 361 QPDSSGGTLTYEGRFEILSLSGSFMPTEXXXXXXXXXXXXXXLASPDGRXXXXXXXXXXX 540
           Q DSSGGTLTYEGRFEILSL+GSF+PTE              LASPDGR           
Sbjct: 165 QQDSSGGTLTYEGRFEILSLTGSFVPTESGGTRNRAGGMSVSLASPDGRVVGGGVAGLLI 224

Query: 541 XXTPVQVVVGSFLPCXXXXXXXXXXXXXSTSAA-----QVTQAIPISSAEMEEAYGGQAQ 705
             +PV VVVGSFLP              S   A     Q T    ++S   EE  GGQ Q
Sbjct: 225 AASPVLVVVGSFLPDNAPVQKPKKMKSVSAQTATPVSVQTTTPPVVTSTPKEEGVGGQGQ 284

Query: 706 RSSTTPKPNLTATASFRGENWAPLHSMQESRNSATDINVSVPEG 837
            SS+  KP++ + +S + ENWA + SMQ+SR S TDIN+S+P G
Sbjct: 285 PSSSALKPDIASPSSIQRENWASMQSMQDSRKSGTDINISLPGG 328


>emb|CBI38857.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score =  275 bits (702), Expect = 3e-71
 Identities = 154/284 (54%), Positives = 184/284 (64%), Gaps = 5/284 (1%)
 Frame = +1

Query: 1   RGRPRKYGPDGAVSSLALSPVPISSSAPAGTSTPMTVDFTTEKRGRGRPAGSLNKHPKVD 180
           RGRPRKY PDG ++S+ LSP+PISSSAP      ++ +F++ KRGRGRP GS +K  +  
Sbjct: 58  RGRPRKYQPDG-MASMTLSPMPISSSAP------LSGNFSSGKRGRGRPVGSESKQKQKV 110

Query: 181 VVENLGNWVSCSVGANFMPHVITVAAGEDVTMKIISFSQQGPRAICILSANGVISNVTLR 360
             EN GNW + S G NF PH+ITV AGEDVTMK+ISFSQQGPRA+CILSANGVISNVTLR
Sbjct: 111 GSENSGNWSAISDGVNFTPHIITVNAGEDVTMKLISFSQQGPRAVCILSANGVISNVTLR 170

Query: 361 QPDSSGGTLTYEGRFEILSLSGSFMPTEXXXXXXXXXXXXXXLASPDGRXXXXXXXXXXX 540
           Q DSSGGTLTYEGRFEILSL+GSF+PTE              LASPDGR           
Sbjct: 171 QQDSSGGTLTYEGRFEILSLTGSFVPTESGGTRNRAGGMSVSLASPDGRVVGGGVAGLLI 230

Query: 541 XXTPVQVVVGSFLPCXXXXXXXXXXXXXSTSAA-----QVTQAIPISSAEMEEAYGGQAQ 705
             +PV VVVGSFLP              S   A     Q T    ++S   EE  GGQ Q
Sbjct: 231 AASPVLVVVGSFLPDNAPVQKPKKMKSVSAQTATPVSVQTTTPPVVTSTPKEEGVGGQGQ 290

Query: 706 RSSTTPKPNLTATASFRGENWAPLHSMQESRNSATDINVSVPEG 837
            SS+  KP++ + +S + ENWA + SMQ+SR S TDIN+S+P G
Sbjct: 291 PSSSALKPDIASPSSIQRENWASMQSMQDSRKSGTDINISLPGG 334


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