BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000397
         (1670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18062.1| unknown [Picea sitchensis]                             154   7e-73
ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-70
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   149   3e-70
ref|XP_002512441.1| arginine/serine-rich splicing factor, putati...   149   3e-70
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   149   3e-70

>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  154 bits (390), Expect(2) = 7e-73
 Identities = 80/115 (69%), Positives = 86/115 (74%)
 Frame = +2

Query: 332 VELAHGGRPQPSPAEXXXXXXXXXXXXXXXXXXXXXXEYRVSVTGLPSSASWQDLKDHMR 511
           VELAHGGR Q S  +                      EYRV V+GLPSSASWQDLKDHMR
Sbjct: 77  VELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRS---EYRVLVSGLPSSASWQDLKDHMR 133

Query: 512 RAGDVCFSQVFHGSSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFTRGYIRVREH 676
           RAGDVCFSQVF  SSGTTGIVDYTNYDDMKYAI+KLDDSEFRNAF+RGYIRV+E+
Sbjct: 134 RAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188



 Score =  147 bits (372), Expect(2) = 7e-73
 Identities = 67/75 (89%), Positives = 72/75 (96%)
 Frame = +3

Query: 48  SKASRTLYVGNLPGDIREREVDDLFYKYGPIVDIDLKVPPRPPGYAFVEFEDCNDAEDAI 227
           S+ASRTLYVGNLPGDIREREV+DLFYKYGPIVDIDLK+PPRPPGY F+EFED  DAEDAI
Sbjct: 3   SRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAI 62

Query: 228 RGRDGYNFDGHRLRV 272
           RGRDGYNFDG+RLRV
Sbjct: 63  RGRDGYNFDGNRLRV 77


>ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|222857366|gb|EEE94913.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  151 bits (382), Expect(2) = 1e-70
 Identities = 78/116 (67%), Positives = 83/116 (71%)
 Frame = +2

Query: 332 VELAHGGRPQPSPAEXXXXXXXXXXXXXXXXXXXXXXEYRVSVTGLPSSASWQDLKDHMR 511
           VELAHGGR   SP +                      +YRV VTGLPSSASWQDLKDHMR
Sbjct: 76  VELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRS----DYRVLVTGLPSSASWQDLKDHMR 131

Query: 512 RAGDVCFSQVFHGSSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFTRGYIRVREHN 679
           RAGDVCFSQVF    G TGIVDYTNYDDMKYAIKKLDDSEFRNAF+R YIRVRE++
Sbjct: 132 RAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187



 Score =  143 bits (361), Expect(2) = 1e-70
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +3

Query: 48  SKASRTLYVGNLPGDIREREVDDLFYKYGPIVDIDLKVPPRPPGYAFVEFEDCNDAEDAI 227
           S+ASRTLYVGNLPGDIR REV+DLFYKYGPIVDIDLK+PPRPPGYAFVEFE+  DAEDAI
Sbjct: 2   SRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAI 61

Query: 228 RGRDGYNFDGHRLRV 272
           RGRDGYNFDG RLRV
Sbjct: 62  RGRDGYNFDGCRLRV 76


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  149 bits (376), Expect(2) = 3e-70
 Identities = 75/118 (63%), Positives = 84/118 (71%)
 Frame = +2

Query: 332 VELAHGGRPQPSPAEXXXXXXXXXXXXXXXXXXXXXXEYRVSVTGLPSSASWQDLKDHMR 511
           VELAHGGR   S  +                      EYRV VTGLPSSASWQDLKDHMR
Sbjct: 77  VELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS----EYRVLVTGLPSSASWQDLKDHMR 132

Query: 512 RAGDVCFSQVFHGSSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFTRGYIRVREHNDT 685
           RAGDVCFSQVFH   GT GIVDYTNYDDMK+AI+KLDDSEFRNAF+R Y+RV+E++ +
Sbjct: 133 RAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSS 190



 Score =  144 bits (363), Expect(2) = 3e-70
 Identities = 66/75 (88%), Positives = 71/75 (94%)
 Frame = +3

Query: 48  SKASRTLYVGNLPGDIREREVDDLFYKYGPIVDIDLKVPPRPPGYAFVEFEDCNDAEDAI 227
           S+ASRTLYVGNLPGDIREREV+DLFYKYGPI  IDLK+PPRPPGYAFVEFE+  DAEDAI
Sbjct: 3   SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAI 62

Query: 228 RGRDGYNFDGHRLRV 272
           RGRDGY+FDGHRLRV
Sbjct: 63  RGRDGYDFDGHRLRV 77


>ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223548402|gb|EEF49893.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 300

 Score =  149 bits (376), Expect(2) = 3e-70
 Identities = 76/116 (65%), Positives = 83/116 (71%)
 Frame = +2

Query: 332 VELAHGGRPQPSPAEXXXXXXXXXXXXXXXXXXXXXXEYRVSVTGLPSSASWQDLKDHMR 511
           VELAHGGR   SP +                      +YRV VTGLPSSASWQDLKDHMR
Sbjct: 114 VELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRS----DYRVLVTGLPSSASWQDLKDHMR 169

Query: 512 RAGDVCFSQVFHGSSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFTRGYIRVREHN 679
           RAGDVCFSQVF    G TGIVDYTNYDDMK+AIKKLDDSEFRNAF+R Y+RVRE++
Sbjct: 170 RAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRSYVRVREYD 225



 Score =  144 bits (363), Expect(2) = 3e-70
 Identities = 72/99 (72%), Positives = 78/99 (78%), Gaps = 11/99 (11%)
 Frame = +3

Query: 9   VFSSRLINMSYK-----------GSKASRTLYVGNLPGDIREREVDDLFYKYGPIVDIDL 155
           V+SSR I    K            S+ASRTLYVGNLPGDIR+REV DLFYKYGPIV++DL
Sbjct: 16  VYSSRRIQTFLKQKQCLLLGKRMSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDL 75

Query: 156 KVPPRPPGYAFVEFEDCNDAEDAIRGRDGYNFDGHRLRV 272
           K+PPRPPGYAFVEFED  DAEDAIRGRDGYNFDG RLRV
Sbjct: 76  KIPPRPPGYAFVEFEDARDAEDAIRGRDGYNFDGCRLRV 114


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  149 bits (376), Expect(2) = 3e-70
 Identities = 75/118 (63%), Positives = 84/118 (71%)
 Frame = +2

Query: 332 VELAHGGRPQPSPAEXXXXXXXXXXXXXXXXXXXXXXEYRVSVTGLPSSASWQDLKDHMR 511
           VELAHGGR   S  +                      EYRV VTGLPSSASWQDLKDHMR
Sbjct: 77  VELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS----EYRVLVTGLPSSASWQDLKDHMR 132

Query: 512 RAGDVCFSQVFHGSSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFTRGYIRVREHNDT 685
           RAGDVCFSQVFH   GT GIVDYTNYDDMK+AI+KLDDSEFRNAF+R Y+RV+E++ +
Sbjct: 133 RAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSS 190



 Score =  144 bits (363), Expect(2) = 3e-70
 Identities = 66/75 (88%), Positives = 71/75 (94%)
 Frame = +3

Query: 48  SKASRTLYVGNLPGDIREREVDDLFYKYGPIVDIDLKVPPRPPGYAFVEFEDCNDAEDAI 227
           S+ASRTLYVGNLPGDIREREV+DLFYKYGPI  IDLK+PPRPPGYAFVEFE+  DAEDAI
Sbjct: 3   SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAI 62

Query: 228 RGRDGYNFDGHRLRV 272
           RGRDGY+FDGHRLRV
Sbjct: 63  RGRDGYDFDGHRLRV 77