BLASTX nr result

ID: Coptis25_contig00000390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000390
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX07458.2| ethylene-responsive element binding protein ERF2 ...   184   2e-59
ref|XP_002533237.1| Ethylene-responsive transcription factor, pu...   170   6e-58
gb|AAT77192.1| ethylene response factor 1 [Gossypium barbadense]      174   2e-56
ref|XP_002331217.1| AP2/ERF domain-containing transcription fact...   169   3e-56
ref|XP_004141728.1| PREDICTED: ethylene-responsive transcription...   161   5e-56

>gb|AAX07458.2| ethylene-responsive element binding protein ERF2 [Gossypium
           hirsutum]
          Length = 390

 Score =  184 bits (467), Expect(2) = 2e-59
 Identities = 98/178 (55%), Positives = 112/178 (62%), Gaps = 8/178 (4%)
 Frame = +1

Query: 1   KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGN 180
           K AKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG 
Sbjct: 111 KCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGK 170

Query: 181 KAKVNFPEH--KNSPARAVKANPQKALPTGNHTLERPVFNQDFSLMNYSSD---DSLGFV 345
           KAKVNFP    + SP  AVK N QK L   N +  +P  NQ+++ +N       D++GFV
Sbjct: 171 KAKVNFPNETPRTSPKHAVKTNSQKPLSKSNSSPVQPNLNQNYNYLNQPEQEYFDTMGFV 230

Query: 346 EEKPLLMGSEFFVSMK---DQTFTPSDGGTLCFTSDQGSNSLNCSDFGWGNQEPKTPE 510
           EEKP +    +   +    D  F  SD   L F SDQGSNS+NCSD+GWG Q  KTPE
Sbjct: 231 EEKPSVNQFAYVDPVPTSIDAGFNQSDNAPLYFNSDQGSNSINCSDYGWGEQGAKTPE 288



 Score = 72.8 bits (177), Expect(2) = 2e-59
 Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = +2

Query: 626 KNLCEELSAFESQMKFLQIP-YLEGSWDGSMDSLFSGDTTLNGGSSLDLWSFEDLPQMVG 802
           K L +EL A ++QMK+ Q+P ++EG+WD ++D+  +GD T +GG+ +DLW+F+D P M  
Sbjct: 328 KTLSDELLALDNQMKYFQMPPFIEGNWDATIDAFLNGDATQDGGNPMDLWNFDDFPTMAE 387

Query: 803 GIF 811
           G+F
Sbjct: 388 GVF 390


>ref|XP_002533237.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223526935|gb|EEF29138.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 383

 Score =  170 bits (430), Expect(2) = 6e-58
 Identities = 98/180 (54%), Positives = 113/180 (62%), Gaps = 10/180 (5%)
 Frame = +1

Query: 1   KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGN 180
           KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG 
Sbjct: 114 KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGK 173

Query: 181 KAKVNFPEH--KNSPARAVKANPQKALPTGNHTLERPVFNQDFSLMNYSSDD---SLGFV 345
           KAKVNFP+   + S   +VKA+PQK       +L +   N+ FS +N +  D   SLGFV
Sbjct: 174 KAKVNFPDEAPRASTKPSVKASPQK-------SLSKTKMNETFSYLNNTEQDYFNSLGFV 226

Query: 346 EEKPLLMGSEFFVSMKDQTFTPSDGGT-----LCFTSDQGSNSLNCSDFGWGNQEPKTPE 510
           +EKP +  S+F   + D   T  D G      + F SDQGSNS +CSDFGWG    KTPE
Sbjct: 227 DEKPPV--SQF--GLMDSFPTNGDSGVKSNFPMYFNSDQGSNSFDCSDFGWGEHASKTPE 282



 Score = 82.0 bits (201), Expect(2) = 6e-58
 Identities = 35/62 (56%), Positives = 51/62 (82%)
 Frame = +2

Query: 626 KNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSSLDLWSFEDLPQMVGG 805
           K+L EEL AF++Q  F Q+PYLEG+W+ S++S  +GDTT +GG+ +DLWSF+DLP +VGG
Sbjct: 323 KSLSEELLAFDNQENF-QVPYLEGNWETSLESFLNGDTTQDGGNPVDLWSFDDLPSLVGG 381

Query: 806 IF 811
           ++
Sbjct: 382 VY 383


>gb|AAT77192.1| ethylene response factor 1 [Gossypium barbadense]
          Length = 319

 Score =  174 bits (440), Expect(2) = 2e-56
 Identities = 94/178 (52%), Positives = 111/178 (62%), Gaps = 8/178 (4%)
 Frame = +1

Query: 1   KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGN 180
           K AKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG 
Sbjct: 40  KCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGK 99

Query: 181 KAKVNFPEH--KNSPARAVKANPQKALPTGNHTLERPVFNQDFSLMNYSSD---DSLGFV 345
           KAKVNFP    + SP  AVK N QK L   N +  +   +Q+++ ++       D++GFV
Sbjct: 100 KAKVNFPNETPRTSPKHAVKTNSQKPLSKSNLSPVQLNLDQNYNYLSQPEQEYFDTMGFV 159

Query: 346 EEKPLLMGSEFFVSMK---DQTFTPSDGGTLCFTSDQGSNSLNCSDFGWGNQEPKTPE 510
           EEKPL+    +   +    D     SD   L F SDQGSNS+NCSD+GWG Q  +TPE
Sbjct: 160 EEKPLVNQFAYVDPVPTSIDAGSNQSDNAPLYFNSDQGSNSINCSDYGWGEQGARTPE 217



 Score = 72.8 bits (177), Expect(2) = 2e-56
 Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = +2

Query: 626 KNLCEELSAFESQMKFLQIP-YLEGSWDGSMDSLFSGDTTLNGGSSLDLWSFEDLPQMVG 802
           K L +EL A ++QMK+ Q+P ++EG+WD ++D+  +GD T +GG+ +DLW+F+D P M  
Sbjct: 257 KTLSDELLALDNQMKYFQMPPFIEGNWDATIDAFLNGDATQDGGNPMDLWNFDDFPTMAE 316

Query: 803 GIF 811
           G+F
Sbjct: 317 GVF 319


>ref|XP_002331217.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222873338|gb|EEF10469.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 378

 Score =  169 bits (429), Expect(2) = 3e-56
 Identities = 97/183 (53%), Positives = 113/183 (61%), Gaps = 13/183 (7%)
 Frame = +1

Query: 1   KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGN 180
           KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG 
Sbjct: 107 KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGK 166

Query: 181 KAKVNFPEHK--NSPARAVKANPQKALPTGNHTLERPVFNQDFSLMNYS--SDDSLGFVE 348
           KAKVNFP+     S  +++K N +K LP  N        +Q FS ++    + +++GFVE
Sbjct: 167 KAKVNFPDEAPLASSKQSIKENSRKPLPKTNS-------SQSFSYLSNPELNYNNMGFVE 219

Query: 349 EKPLLMGSEFFVSMKD---------QTFTPSDGGTLCFTSDQGSNSLNCSDFGWGNQEPK 501
           EKPL+     F SM           +T  PSD   +CF SDQGSNS +C DFGWG Q P 
Sbjct: 220 EKPLV---NQFGSMNSFPVNGDSGMKTLAPSDSAPMCFNSDQGSNSFDC-DFGWGEQTPM 275

Query: 502 TPE 510
           TPE
Sbjct: 276 TPE 278



 Score = 76.6 bits (187), Expect(2) = 3e-56
 Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = +2

Query: 626 KNLCEELSAFESQMKFLQIPYLEGS-WDGSMDSLFSGDTTLNGGSSLDLWSFEDLPQMVG 802
           K+L EEL AF+SQ+K+LQ+P  EGS W+ S+DS  + +TT +G +++DLWSF+D P MVG
Sbjct: 316 KSLSEELLAFDSQLKYLQMPDAEGSSWEASLDSFLNVETTQDGTNAMDLWSFDDFPSMVG 375

Query: 803 GIF 811
           G++
Sbjct: 376 GVY 378


>ref|XP_004141728.1| PREDICTED: ethylene-responsive transcription factor RAP2-12-like
           [Cucumis sativus]
          Length = 389

 Score =  161 bits (408), Expect(2) = 5e-56
 Identities = 93/182 (51%), Positives = 111/182 (60%), Gaps = 12/182 (6%)
 Frame = +1

Query: 1   KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGN 180
           KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG 
Sbjct: 105 KSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGK 164

Query: 181 KAKVNFPEH--KNSPARAVKANPQKALPTGNHTLERPVFNQDFSLMNYSSD---DSLGFV 345
           KAKVNFP+   + S  R+ KAN Q+ LP  +    +P   Q+ + +N S +    ++GF+
Sbjct: 165 KAKVNFPDETPRTSGKRSAKANLQEPLPKTSLAKTQPDLIQNNNFVNNSDEAYYSTMGFL 224

Query: 346 EEKPL---LMGSEFFVSMKDQTF----TPSDGGTLCFTSDQGSNSLNCSDFGWGNQEPKT 504
           EEKPL   L   +   +  D         SD   + F SDQGSNS + SDFGWG Q  +T
Sbjct: 225 EEKPLTNQLPNMDSLATNGDIVIKTSPASSDVVPMYFNSDQGSNSFDYSDFGWGEQGART 284

Query: 505 PE 510
           PE
Sbjct: 285 PE 286



 Score = 84.0 bits (206), Expect(2) = 5e-56
 Identities = 37/63 (58%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = +2

Query: 626 KNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDT-TLNGGSSLDLWSFEDLPQMVG 802
           K L EELS+FES+MK+ Q+PYL+GSWD SMD+  +G+T   +GG+S+DLW+F+DL  MVG
Sbjct: 327 KTLSEELSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVG 386

Query: 803 GIF 811
            +F
Sbjct: 387 NVF 389


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