BLASTX nr result
ID: Coptis25_contig00000385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000385
(1397 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-contai... 138 1e-34
emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera] 138 1e-34
emb|CBI19798.3| unnamed protein product [Vitis vinifera] 127 1e-34
ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putat... 129 9e-33
ref|XP_004164050.1| PREDICTED: uncharacterized TPR repeat-contai... 134 6e-29
>ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Vitis vinifera]
Length = 799
Score = 127 bits (319), Expect(2) = 1e-34
Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Frame = +1
Query: 766 CSCPPDKCKRIAFDALLWLPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMLEIHGEA 945
C PDK KR+A+DALLW PVNE +Q+R+ADAL YIKLLR +YIPSHG SEMLE+HGEA
Sbjct: 626 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 685
Query: 946 DVSTIXXXXXXXXXMIRIGVLES*PLW*RLKQGIGLGMVIMP------------ACSVCH 1089
DVS + + ++ P W G G+ ++ ACSVC
Sbjct: 686 DVSMV--------SLSEFLLMFDDPDW-----GFGIMSSLVKLETGDRTRHGRYACSVCR 732
Query: 1090 YPVIGSRFKEMKSHYIL 1140
YP+IGSRFKEMKSH+ L
Sbjct: 733 YPIIGSRFKEMKSHFSL 749
Score = 47.4 bits (111), Expect(2) = 1e-34
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 695 INEKILSVLDASGSGRVDLGMFFVVLA 775
INE+ILSVLD +GSGRVDLGMFF VLA
Sbjct: 597 INERILSVLDETGSGRVDLGMFFSVLA 623
Score = 138 bits (348), Expect = 3e-30
Identities = 67/109 (61%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +3
Query: 972 FVVMFDDSDWGFGIMTTMVKVETGDRTRHGYHAGLLCVPLSRYWVT-LQGDEISLYFSLC 1148
F++MFDD DWGFGIM+++VK+ETGDRTRHG +A +C RY + + E+ +FSLC
Sbjct: 695 FLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSLC 750
Query: 1149 NQCYSEGKVPSSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNSENDP 1295
NQCYSEGKVPS+ K EEY+FKEYGSE+EA+KDKC+ F+L K++S NDP
Sbjct: 751 NQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSSYNDP 799
>emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
Length = 799
Score = 127 bits (319), Expect(2) = 1e-34
Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Frame = +1
Query: 766 CSCPPDKCKRIAFDALLWLPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMLEIHGEA 945
C PDK KR+A+DALLW PVNE +Q+R+ADAL YIKLLR +YIPSHG SEMLE+HGEA
Sbjct: 626 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 685
Query: 946 DVSTIXXXXXXXXXMIRIGVLES*PLW*RLKQGIGLGMVIMP------------ACSVCH 1089
DVS + + ++ P W G G+ ++ ACSVC
Sbjct: 686 DVSMV--------SLSEFLLMFDDPDW-----GFGIMSSLVKLETGDRTRHGRYACSVCR 732
Query: 1090 YPVIGSRFKEMKSHYIL 1140
YP+IGSRFKEMKSH+ L
Sbjct: 733 YPIIGSRFKEMKSHFSL 749
Score = 47.4 bits (111), Expect(2) = 1e-34
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 695 INEKILSVLDASGSGRVDLGMFFVVLA 775
INE+ILSVLD +GSGRVDLGMFF VLA
Sbjct: 597 INERILSVLDETGSGRVDLGMFFSVLA 623
Score = 138 bits (348), Expect = 3e-30
Identities = 67/109 (61%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +3
Query: 972 FVVMFDDSDWGFGIMTTMVKVETGDRTRHGYHAGLLCVPLSRYWVT-LQGDEISLYFSLC 1148
F++MFDD DWGFGIM+++VK+ETGDRTRHG +A +C RY + + E+ +FSLC
Sbjct: 695 FLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSLC 750
Query: 1149 NQCYSEGKVPSSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNSENDP 1295
NQCYSEGKVPS+ K EEY+FKEYGSE+EA+KDKC+ F+L K++S NDP
Sbjct: 751 NQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCLCFNLQSKSSSYNDP 799
>emb|CBI19798.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 127 bits (319), Expect(2) = 1e-34
Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Frame = +1
Query: 766 CSCPPDKCKRIAFDALLWLPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMLEIHGEA 945
C PDK KR+A+DALLW PVNE +Q+R+ADAL YIKLLR +YIPSHG SEMLE+HGEA
Sbjct: 573 CGGSPDKRKRVAYDALLWRPVNEGSAQIRKADALKYIKLLRAIYIPSHGVSEMLEVHGEA 632
Query: 946 DVSTIXXXXXXXXXMIRIGVLES*PLW*RLKQGIGLGMVIMP------------ACSVCH 1089
DVS + + ++ P W G G+ ++ ACSVC
Sbjct: 633 DVSMV--------SLSEFLLMFDDPDW-----GFGIMSSLVKLETGDRTRHGRYACSVCR 679
Query: 1090 YPVIGSRFKEMKSHYIL 1140
YP+IGSRFKEMKSH+ L
Sbjct: 680 YPIIGSRFKEMKSHFSL 696
Score = 47.4 bits (111), Expect(2) = 1e-34
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 695 INEKILSVLDASGSGRVDLGMFFVVLA 775
INE+ILSVLD +GSGRVDLGMFF VLA
Sbjct: 544 INERILSVLDETGSGRVDLGMFFSVLA 570
Score = 124 bits (312), Expect = 5e-26
Identities = 60/95 (63%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Frame = +3
Query: 972 FVVMFDDSDWGFGIMTTMVKVETGDRTRHGYHAGLLCVPLSRYWVT-LQGDEISLYFSLC 1148
F++MFDD DWGFGIM+++VK+ETGDRTRHG +A +C RY + + E+ +FSLC
Sbjct: 642 FLLMFDDPDWGFGIMSSLVKLETGDRTRHGRYACSVC----RYPIIGSRFKEMKSHFSLC 697
Query: 1149 NQCYSEGKVPSSCK*EEYKFKEYGSEAEAVKDKCM 1253
NQCYSEGKVPS+ K EEY+FKEYGSE+EA+KDKC+
Sbjct: 698 NQCYSEGKVPSTFKQEEYRFKEYGSESEAMKDKCL 732
>ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223551182|gb|EEF52668.1| tetratricopeptide repeat
protein, tpr, putative [Ricinus communis]
Length = 804
Score = 120 bits (302), Expect(2) = 9e-33
Identities = 72/156 (46%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Frame = +1
Query: 766 CSCPPDKCKRIAFDALLWLPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMLEIHGEA 945
CS PDK KRIAFD+LLWLPVNE SQV++ DA+ YIKLLR +YIPSHG SEMLE+HG
Sbjct: 636 CSGNPDKRKRIAFDSLLWLPVNEGSSQVKKVDAVRYIKLLRAIYIPSHGVSEMLEVHGGT 695
Query: 946 DVSTIXXXXXXXXXMIRIGVLES*PLW*RLKQGIGLGMVIMP------------ACSVCH 1089
D S + V+ P W G G+ ++ CSVC
Sbjct: 696 DSSMVSFNDFL--------VMFDDPDW-----GFGIMSTLIKLETGDRNRHGNHVCSVCR 742
Query: 1090 YPVIGSRFKEMKSHYILACVINVTVKERCHPPASRK 1197
YP+IGSRFKEMKS + L N E PPA ++
Sbjct: 743 YPIIGSRFKEMKSRFSLC---NQCYSEGKVPPAFKQ 775
Score = 47.4 bits (111), Expect(2) = 9e-33
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2
Query: 695 INEKILSVLDASGSGRVDLGMFFVVLA 775
INE+ILSVLD GSGRVDLGMFF VLA
Sbjct: 607 INERILSVLDEMGSGRVDLGMFFAVLA 633
Score = 129 bits (323), Expect = 2e-27
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Frame = +3
Query: 972 FVVMFDDSDWGFGIMTTMVKVETGDRTRHGYHAGLLCVPLSRYWVT-LQGDEISLYFSLC 1148
F+VMFDD DWGFGIM+T++K+ETGDR RHG H +C RY + + E+ FSLC
Sbjct: 705 FLVMFDDPDWGFGIMSTLIKLETGDRNRHGNHVCSVC----RYPIIGSRFKEMKSRFSLC 760
Query: 1149 NQCYSEGKVPSSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNN 1280
NQCYSEGKVP + K +EYKFKEYG+E+EAVKDKCM F+L N+
Sbjct: 761 NQCYSEGKVPPAFKQDEYKFKEYGNESEAVKDKCMCFTLQSHND 804
>ref|XP_004164050.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Cucumis sativus]
Length = 798
Score = 134 bits (337), Expect = 6e-29
Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = +3
Query: 972 FVVMFDDSDWGFGIMTTMVKVETGDRTRHGYHAGLLCVPLSRYWVT-LQGDEISLYFSLC 1148
F+VMF+DSDWGFGIM+T++K+E GDR RHG H +C RY + + EI +FSLC
Sbjct: 698 FLVMFNDSDWGFGIMSTLLKLEAGDRNRHGNHVCSVC----RYPIIGSRFKEIKSHFSLC 753
Query: 1149 NQCYSEGKVPSSCK*EEYKFKEYGSEAEAVKDKCMIFSLHLKNNS 1283
NQCYSEGKVP SCK EEY+FKEYGSE EAVKDKC FS+ +++S
Sbjct: 754 NQCYSEGKVPPSCKQEEYRFKEYGSEGEAVKDKCFCFSMQSRDDS 798
Score = 101 bits (252), Expect(2) = 3e-27
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Frame = +1
Query: 766 CSCPPDKCKRIAFDALLWLPVNESISQVRRADALTYIKLLRVVYIPSHGTSEMLEIHGEA 945
C+ P +K KR+A+DAL+W PVN+ +Q+R+ DA+ YIKLLR +Y+P+ +SE+LE+HG+
Sbjct: 629 CTGPTEKRKRVAYDALVWRPVNDGGTQIRKFDAVRYIKLLRSIYVPTQRSSEILEVHGQT 688
Query: 946 DVSTIXXXXXXXXXMIRIGVLES*PLW*RLKQGIGLGMVIMP------------ACSVCH 1089
D S + V+ + W G G+ ++ CSVC
Sbjct: 689 DNSIV--------SFTEFLVMFNDSDW-----GFGIMSTLLKLEAGDRNRHGNHVCSVCR 735
Query: 1090 YPVIGSRFKEMKSHYILACVINVTVKERCHPPASRK 1197
YP+IGSRFKE+KSH+ L N E PP+ ++
Sbjct: 736 YPIIGSRFKEIKSHFSLC---NQCYSEGKVPPSCKQ 768
Score = 48.1 bits (113), Expect(2) = 3e-27
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 695 INEKILSVLDASGSGRVDLGMFFVVLA 775
INE+ILSVLD SGSGRVDLG+FF VLA
Sbjct: 600 INERILSVLDESGSGRVDLGLFFAVLA 626