BLASTX nr result
ID: Coptis25_contig00000359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000359 (624 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q39313.1|DEF3_BRANA RecName: Full=Defensin-like protein 3; Al... 78 1e-12 gb|AAY15221.1| antifungal protein [Sinapis alba] 77 3e-12 ref|NP_199256.1| defensin-like protein 17 [Arabidopsis thaliana]... 77 3e-12 gb|AAY27738.1| putative plant defensin PDF1.3 [Arabidopsis halle... 76 4e-12 sp|O24331.1|DEF4_RAPSA RecName: Full=Defensin-like protein 4; Al... 76 6e-12 >sp|Q39313.1|DEF3_BRANA RecName: Full=Defensin-like protein 3; AltName: Full=Cysteine-rich antifungal protein 3; Short=AFP3; Flags: Precursor gi|1399230|gb|AAB03224.1| antifungal protein [Brassica napus] gi|60686419|gb|AAX35338.1| defensin 1.2 [Brassica napus] gi|151382079|gb|ABS11037.1| defensin [Brassica oleracea var. gemmifera] gi|218436744|dbj|BAH03381.1| plant defensin [Brassica rapa subsp. chinensis] gi|244539519|dbj|BAH82667.1| defensin 1.2 [Brassica rapa subsp. chinensis] Length = 79 Score = 78.2 bits (191), Expect = 1e-12 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 4/80 (5%) Frame = +3 Query: 99 VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAECERPSGTWSGPCFNSLACNNQCIRSEGA 278 + F ++ TLLF +V + FE PTMVEA CER SGTWSG C N+ AC NQCIR EGA Sbjct: 1 MAKFASIITLLFAALVVFA-AFEAPTMVEAKLCERSSGTWSGVCGNNNACKNQCIRLEGA 59 Query: 279 LRGTCK----RFACLCTKQC 326 G+C C+C C Sbjct: 60 QHGSCNYVFPAHKCICYFPC 79 >gb|AAY15221.1| antifungal protein [Sinapis alba] Length = 80 Score = 77.0 bits (188), Expect = 3e-12 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 5/81 (6%) Frame = +3 Query: 99 VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275 + F ++ TLLF LVL FETP MVEA + CERPSGTWSG C NS +C NQCI EG Sbjct: 1 MAKFASIITLLFAA-LVLFAAFETPAMVEAQKLCERPSGTWSGVCGNSNSCKNQCINLEG 59 Query: 276 ALRGTCK----RFACLCTKQC 326 A G+C C+C C Sbjct: 60 ARHGSCNYVFPAHKCICYFPC 80 >ref|NP_199256.1| defensin-like protein 17 [Arabidopsis thaliana] gi|75262500|sp|Q9FI22.1|DEF17_ARATH RecName: Full=Defensin-like protein 17; AltName: Full=Plant defensin 1.2c; Flags: Precursor gi|9758696|dbj|BAB09150.1| antifungal protein-like [Arabidopsis thaliana] gi|332007725|gb|AED95108.1| defensin-like protein 17 [Arabidopsis thaliana] Length = 80 Score = 76.6 bits (187), Expect = 3e-12 Identities = 45/85 (52%), Positives = 50/85 (58%), Gaps = 5/85 (5%) Frame = +3 Query: 87 MAKSVTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCI 263 MAKS T + T LF LVL FE PTMVEA + CE+PSGTWSG C NS AC NQCI Sbjct: 1 MAKSAT----IITFLFAA-LVLFAAFEAPTMVEAQKLCEKPSGTWSGVCGNSNACKNQCI 55 Query: 264 RSEGALRGTCK----RFACLCTKQC 326 EGA G+C C+C C Sbjct: 56 NLEGAKHGSCNYVFPAHKCICYVPC 80 >gb|AAY27738.1| putative plant defensin PDF1.3 [Arabidopsis halleri] gi|383100999|emb|CCD74541.1| defensin [Arabidopsis halleri subsp. halleri] Length = 80 Score = 76.3 bits (186), Expect = 4e-12 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 5/81 (6%) Frame = +3 Query: 99 VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275 + F ++ TL+F LVL FE PTMVEA + CE+PSGTWSG C NS AC NQCI EG Sbjct: 1 MAKFASIITLIFAA-LVLFAAFEAPTMVEAQKFCEKPSGTWSGVCGNSNACKNQCINLEG 59 Query: 276 ALRGTCK----RFACLCTKQC 326 A G+C C+C C Sbjct: 60 AKHGSCNYVFPAHKCICYFPC 80 >sp|O24331.1|DEF4_RAPSA RecName: Full=Defensin-like protein 4; AltName: Full=Cysteine-rich antifungal protein 4; Short=AFP4; Flags: Precursor gi|1655683|emb|CAA65983.1| antifungal protein 4 [Raphanus sativus] Length = 80 Score = 75.9 bits (185), Expect = 6e-12 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 5/81 (6%) Frame = +3 Query: 99 VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275 + F ++ TLLFV LVL FE PTMVEA + CER SGTWSG C N+ AC NQCI EG Sbjct: 1 MAKFVSIITLLFVA-LVLFAAFEAPTMVEAQKLCERSSGTWSGVCGNNNACKNQCINLEG 59 Query: 276 ALRGTCKRF----ACLCTKQC 326 A G+C C+C C Sbjct: 60 ARHGSCNYIFPYHRCICYFPC 80