BLASTX nr result

ID: Coptis25_contig00000359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000359
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q39313.1|DEF3_BRANA RecName: Full=Defensin-like protein 3; Al...    78   1e-12
gb|AAY15221.1| antifungal protein [Sinapis alba]                       77   3e-12
ref|NP_199256.1| defensin-like protein 17 [Arabidopsis thaliana]...    77   3e-12
gb|AAY27738.1| putative plant defensin PDF1.3 [Arabidopsis halle...    76   4e-12
sp|O24331.1|DEF4_RAPSA RecName: Full=Defensin-like protein 4; Al...    76   6e-12

>sp|Q39313.1|DEF3_BRANA RecName: Full=Defensin-like protein 3; AltName: Full=Cysteine-rich
           antifungal protein 3; Short=AFP3; Flags: Precursor
           gi|1399230|gb|AAB03224.1| antifungal protein [Brassica
           napus] gi|60686419|gb|AAX35338.1| defensin 1.2 [Brassica
           napus] gi|151382079|gb|ABS11037.1| defensin [Brassica
           oleracea var. gemmifera] gi|218436744|dbj|BAH03381.1|
           plant defensin [Brassica rapa subsp. chinensis]
           gi|244539519|dbj|BAH82667.1| defensin 1.2 [Brassica rapa
           subsp. chinensis]
          Length = 79

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
 Frame = +3

Query: 99  VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAECERPSGTWSGPCFNSLACNNQCIRSEGA 278
           +  F ++ TLLF   +V +  FE PTMVEA  CER SGTWSG C N+ AC NQCIR EGA
Sbjct: 1   MAKFASIITLLFAALVVFA-AFEAPTMVEAKLCERSSGTWSGVCGNNNACKNQCIRLEGA 59

Query: 279 LRGTCK----RFACLCTKQC 326
             G+C        C+C   C
Sbjct: 60  QHGSCNYVFPAHKCICYFPC 79


>gb|AAY15221.1| antifungal protein [Sinapis alba]
          Length = 80

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = +3

Query: 99  VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275
           +  F ++ TLLF   LVL   FETP MVEA + CERPSGTWSG C NS +C NQCI  EG
Sbjct: 1   MAKFASIITLLFAA-LVLFAAFETPAMVEAQKLCERPSGTWSGVCGNSNSCKNQCINLEG 59

Query: 276 ALRGTCK----RFACLCTKQC 326
           A  G+C        C+C   C
Sbjct: 60  ARHGSCNYVFPAHKCICYFPC 80


>ref|NP_199256.1| defensin-like protein 17 [Arabidopsis thaliana]
           gi|75262500|sp|Q9FI22.1|DEF17_ARATH RecName:
           Full=Defensin-like protein 17; AltName: Full=Plant
           defensin 1.2c; Flags: Precursor
           gi|9758696|dbj|BAB09150.1| antifungal protein-like
           [Arabidopsis thaliana] gi|332007725|gb|AED95108.1|
           defensin-like protein 17 [Arabidopsis thaliana]
          Length = 80

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/85 (52%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +3

Query: 87  MAKSVTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCI 263
           MAKS T    + T LF   LVL   FE PTMVEA + CE+PSGTWSG C NS AC NQCI
Sbjct: 1   MAKSAT----IITFLFAA-LVLFAAFEAPTMVEAQKLCEKPSGTWSGVCGNSNACKNQCI 55

Query: 264 RSEGALRGTCK----RFACLCTKQC 326
             EGA  G+C        C+C   C
Sbjct: 56  NLEGAKHGSCNYVFPAHKCICYVPC 80


>gb|AAY27738.1| putative plant defensin PDF1.3 [Arabidopsis halleri]
           gi|383100999|emb|CCD74541.1| defensin [Arabidopsis
           halleri subsp. halleri]
          Length = 80

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = +3

Query: 99  VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275
           +  F ++ TL+F   LVL   FE PTMVEA + CE+PSGTWSG C NS AC NQCI  EG
Sbjct: 1   MAKFASIITLIFAA-LVLFAAFEAPTMVEAQKFCEKPSGTWSGVCGNSNACKNQCINLEG 59

Query: 276 ALRGTCK----RFACLCTKQC 326
           A  G+C        C+C   C
Sbjct: 60  AKHGSCNYVFPAHKCICYFPC 80


>sp|O24331.1|DEF4_RAPSA RecName: Full=Defensin-like protein 4; AltName: Full=Cysteine-rich
           antifungal protein 4; Short=AFP4; Flags: Precursor
           gi|1655683|emb|CAA65983.1| antifungal protein 4
           [Raphanus sativus]
          Length = 80

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = +3

Query: 99  VTSFFTLSTLLFVIFLVLSNTFETPTMVEAAE-CERPSGTWSGPCFNSLACNNQCIRSEG 275
           +  F ++ TLLFV  LVL   FE PTMVEA + CER SGTWSG C N+ AC NQCI  EG
Sbjct: 1   MAKFVSIITLLFVA-LVLFAAFEAPTMVEAQKLCERSSGTWSGVCGNNNACKNQCINLEG 59

Query: 276 ALRGTCKRF----ACLCTKQC 326
           A  G+C        C+C   C
Sbjct: 60  ARHGSCNYIFPYHRCICYFPC 80


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