BLASTX nr result

ID: Coptis25_contig00000357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000357
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi...   152   2e-34
ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi...   151   3e-34
gb|AFK48563.1| unknown [Medicago truncatula]                          150   8e-34
ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854...   142   2e-31
ref|XP_002514869.1| hypothetical protein RCOM_1078910 [Ricinus c...   137   4e-30

>ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi|222846587|gb|EEE84134.1|
            SAUR family protein [Populus trichocarpa]
          Length = 160

 Score =  152 bits (383), Expect = 2e-34
 Identities = 80/132 (60%), Positives = 97/132 (73%), Gaps = 7/132 (5%)
 Frame = +2

Query: 635  GGKKFSRLPIDFTSKSKSWPCSPDSPK--HDKRKTR-RQVVPEGCFSVYVGIQRQRFVIK 805
            G K+ SRL    T KSKS+P    S +  HD++ +R R+V PEGCFSVYVG Q+QRFVIK
Sbjct: 28   GSKRTSRLVRSLTPKSKSYPHIKVSLEDDHDRKHSRQRRVAPEGCFSVYVGPQKQRFVIK 87

Query: 806  TDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFYTVLSEID----GDEIRPGCAFA 973
            T+  NHPLFKMLLEEAE EYG++ EGPL LPC+VD+FY VL  ++     D+I  GC FA
Sbjct: 88   TEYANHPLFKMLLEEAESEYGYSSEGPLTLPCNVDIFYRVLMAVEDTNIDDKIHLGCGFA 147

Query: 974  KGYGSYHLVSPS 1009
            K YGSYHL+SPS
Sbjct: 148  KNYGSYHLLSPS 159


>ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi|222841202|gb|EEE78749.1|
            SAUR family protein [Populus trichocarpa]
          Length = 167

 Score =  151 bits (382), Expect = 3e-34
 Identities = 79/139 (56%), Positives = 102/139 (73%), Gaps = 7/139 (5%)
 Frame = +2

Query: 635  GGKKFSRLPIDFTSKSKSWPCSPDSPK--HDKRKTRR-QVVPEGCFSVYVGIQRQRFVIK 805
            G K+ SRL    T KSKS P    S +  HD++ +R+ +V PEGCFSVYVG Q+QRFVIK
Sbjct: 28   GSKRTSRLERSLTPKSKSCPHIKVSLEDDHDQKHSRKSRVAPEGCFSVYVGPQKQRFVIK 87

Query: 806  TDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFYTVLSEID----GDEIRPGCAFA 973
            T+  NHPLFK+LLEEAE EYG+N EGPL LPC+VD+FY VL  ++     ++I  GC+FA
Sbjct: 88   TEYANHPLFKILLEEAESEYGYNPEGPLTLPCNVDIFYKVLMAMEDTGIDNKIHRGCSFA 147

Query: 974  KGYGSYHLVSPSRLVAVGR 1030
            K YGSYHL+SPSR++ + +
Sbjct: 148  KNYGSYHLLSPSRMIVLNQ 166


>gb|AFK48563.1| unknown [Medicago truncatula]
          Length = 162

 Score =  150 bits (378), Expect = 8e-34
 Identities = 74/134 (55%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
 Frame = +2

Query: 632  GGG---KKFSRLPIDFTSKSKSWPCSPDSPKHDKRKTRRQVVPEGCFSVYVGIQRQRFVI 802
            GGG   K +S      T +SKSWP  P      +   R++V PEGCFSVYVG Q QRFVI
Sbjct: 30   GGGHKSKSYSSSVTPTTRRSKSWPGLP----RGEENRRKKVAPEGCFSVYVGPQMQRFVI 85

Query: 803  KTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFYTVLSEIDGDEIRPGCAFAKGY 982
            KT+  NHPLFKMLLEEAE EYG++C+GPL LPC+VD+FY VL E+D +    GC F +  
Sbjct: 86   KTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDVFYKVLMEMDNEAPLQGCTFGRSR 145

Query: 983  GSYHLVSPSRLVAV 1024
             SYHL+SPSR++ +
Sbjct: 146  SSYHLLSPSRMIVL 159


>ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854260 [Vitis vinifera]
          Length = 153

 Score =  142 bits (358), Expect = 2e-31
 Identities = 70/122 (57%), Positives = 91/122 (74%), Gaps = 6/122 (4%)
 Frame = +2

Query: 677  KSKSWP-----CSPDSPKHDKRKTRRQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKML 841
            KSKSWP      +  S + DKR  + +V PEGCFSVYVG ++QRFVIKT+  NHPLFK+L
Sbjct: 29   KSKSWPRITAAAAAASLEDDKRVKKGRVAPEGCFSVYVGPEKQRFVIKTEYANHPLFKIL 88

Query: 842  LEEAELEYGHNCEGPLVLPCDVDMFYTVLSEID-GDEIRPGCAFAKGYGSYHLVSPSRLV 1018
            LEEAELEYG+N EGPL LPC+V++F+ VL E+D  D+I  GC F + + SY L+SPS ++
Sbjct: 89   LEEAELEYGYNSEGPLALPCNVEIFHKVLLEMDSSDKIHQGCTFPRSHSSYRLLSPSPMI 148

Query: 1019 AV 1024
            A+
Sbjct: 149  AM 150


>ref|XP_002514869.1| hypothetical protein RCOM_1078910 [Ricinus communis]
            gi|223545920|gb|EEF47423.1| hypothetical protein
            RCOM_1078910 [Ricinus communis]
          Length = 174

 Score =  137 bits (346), Expect = 4e-30
 Identities = 76/145 (52%), Positives = 94/145 (64%), Gaps = 15/145 (10%)
 Frame = +2

Query: 635  GGKKFSRLPIDFTSKSKSWP---CSPDSPKHDKRKT-----RRQVVPEGCFSVYVGIQRQ 790
            G K+ SRL     +KSKS P     P     D+R +     +R+V PEGCFSVYVG ++Q
Sbjct: 27   GSKRTSRLVGSLITKSKSLPHLHIHPSIGDDDQRSSSSSSRKRRVAPEGCFSVYVGPEKQ 86

Query: 791  RFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFYTVLSEIDGDE------- 949
            RFVIKT+  NHPLFK+LLEEAE EYG+N EGPL LPC+VD+F  VL  +D  +       
Sbjct: 87   RFVIKTEYANHPLFKVLLEEAESEYGYNPEGPLALPCNVDIFCKVLVAMDSSDDEAIHPH 146

Query: 950  IRPGCAFAKGYGSYHLVSPSRLVAV 1024
             R GC F+K YGSY L+SPSR  A+
Sbjct: 147  RRQGCGFSKNYGSYRLLSPSRTTAL 171


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