BLASTX nr result

ID: Coptis25_contig00000342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000342
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328512.1| predicted protein [Populus trichocarpa] gi|2...   106   8e-21
ref|XP_002512195.1| calcium ion binding protein, putative [Ricin...   102   8e-20
ref|XP_004153292.1| PREDICTED: uncharacterized protein LOC101213...   101   2e-19
ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|1...   100   3e-19
ref|NP_566015.1| calcium-binding EF-hand-containing protein [Ara...    99   9e-19

>ref|XP_002328512.1| predicted protein [Populus trichocarpa] gi|222838227|gb|EEE76592.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  106 bits (264), Expect = 8e-21
 Identities = 50/97 (51%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = -3

Query: 500 LDVNGDGVLSRLELQKEFNSML-LGNETSTQEEISNLYENIFEKFDSDKNGTIDVEEFRT 324
           LDV+GDGVLSR EL++ F  ++ LG+E+S +E+I +L++ IF++FD D+NG+ID  EF+ 
Sbjct: 32  LDVDGDGVLSRSELREGFCKLMSLGHESSKKEKIDHLFDTIFDRFDEDQNGSIDPREFKC 91

Query: 323 EMKEIMLAVAQGLGNSPIQVALEYNGFLMRALEHEMG 213
            ++E+M A+ +G GNSP+ VALE +  LM+A+EHE G
Sbjct: 92  LIRELMFAMGRGFGNSPVLVALEIDSLLMKAVEHEFG 128


>ref|XP_002512195.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223548739|gb|EEF50229.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 143

 Score =  102 bits (255), Expect = 8e-20
 Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 8/102 (7%)
 Frame = -3

Query: 500 LDVNGDGVLSRLELQKEFNSMLL-----GNETSTQ-EEISNLYENIFEKFDSDKNGTIDV 339
           LD+N DGVLSR EL+K F S+ L     G +  T  E+++ LY++IFEKFD DK+GT+D+
Sbjct: 32  LDLNNDGVLSRSELRKAFESLRLIESHFGIDVVTPPEQLTQLYDSIFEKFDCDKSGTVDL 91

Query: 338 EEFRTEMKEIMLAVAQGLGNSPIQVALEYN--GFLMRALEHE 219
           +EFRTE+K+I+LA+A GLG+SPIQ+ALE +  GFL +A + E
Sbjct: 92  DEFRTEIKKILLAIADGLGSSPIQMALEDDDQGFLKKAADLE 133


>ref|XP_004153292.1| PREDICTED: uncharacterized protein LOC101213961 [Cucumis sativus]
           gi|449532869|ref|XP_004173400.1| PREDICTED:
           uncharacterized protein LOC101231510 [Cucumis sativus]
          Length = 142

 Score =  101 bits (251), Expect = 2e-19
 Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 13/116 (11%)
 Frame = -3

Query: 527 EPHPHRSI-----ALDVNGDGVLSRLELQKEFNSMLL------GNETSTQEEISNLYENI 381
           E H ++SI     +LD+N DGVLSR EL+K F ++ L       +  +T E+++ LY++I
Sbjct: 18  ESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSI 77

Query: 380 FEKFDSDKNGTIDVEEFRTEMKEIMLAVAQGLGNSPIQVALE--YNGFLMRALEHE 219
           FE+FD DK+GT+D EEFRTEMK I+LA+A GLG+SPIQ+AL+     FL +A + E
Sbjct: 78  FEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLE 133


>ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|118484657|gb|ABK94199.1|
           unknown [Populus trichocarpa]
           gi|222872721|gb|EEF09852.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  100 bits (250), Expect = 3e-19
 Identities = 53/102 (51%), Positives = 80/102 (78%), Gaps = 8/102 (7%)
 Frame = -3

Query: 500 LDVNGDGVLSRLELQKEFNSMLL-----GNETSTQ-EEISNLYENIFEKFDSDKNGTIDV 339
           LD+N DGVLSR EL+K F ++ L     G + +T  EE++NLY++IF+KFD D++G++D+
Sbjct: 32  LDLNNDGVLSRSELRKAFETLRLIETHFGVDVATAPEELTNLYDSIFDKFDCDQSGSVDL 91

Query: 338 EEFRTEMKEIMLAVAQGLGNSPIQVALEYN--GFLMRALEHE 219
           EE+R+E+K+IMLA+A GLG+SPIQ+ALE +  GF+ +A + E
Sbjct: 92  EEYRSELKKIMLAIADGLGSSPIQMALEDDDQGFIKQAADLE 133


>ref|NP_566015.1| calcium-binding EF-hand-containing protein [Arabidopsis thaliana]
           gi|3128177|gb|AAC16081.1| expressed protein [Arabidopsis
           thaliana] gi|18252875|gb|AAL62364.1| unknown protein
           [Arabidopsis thaliana] gi|21387065|gb|AAM47936.1|
           unknown protein [Arabidopsis thaliana]
           gi|21554910|gb|AAM63727.1| unknown [Arabidopsis
           thaliana] gi|330255313|gb|AEC10407.1| calcium-binding
           EF-hand-containing protein [Arabidopsis thaliana]
          Length = 142

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 55/106 (51%), Positives = 79/106 (74%), Gaps = 8/106 (7%)
 Frame = -3

Query: 512 RSIALDVNGDGVLSRLELQKEFNSMLL-----GNETST-QEEISNLYENIFEKFDSDKNG 351
           R  ALD+N DGVLSR EL+K F SM L     G +  T Q+E++NLY++IFEKFD+D++G
Sbjct: 28  RFAALDLNKDGVLSRSELRKAFESMRLLESHFGVDVVTPQDELTNLYDSIFEKFDTDQSG 87

Query: 350 TIDVEEFRTEMKEIMLAVAQGLGNSPIQVAL--EYNGFLMRALEHE 219
           ++D+EEFR+EMK+I+LA+A GLG+ PI + L  + + FL +A + E
Sbjct: 88  SVDLEEFRSEMKKIVLAIADGLGSCPITMVLDDDDDNFLKKAADLE 133


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