BLASTX nr result

ID: Coptis25_contig00000336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000336
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-45
ref|XP_002273672.2| PREDICTED: uncharacterized protein LOC100257...   184   5e-44
ref|XP_003534939.1| PREDICTED: uncharacterized protein LOC100807...   183   1e-43
ref|XP_003534938.1| PREDICTED: uncharacterized protein LOC100807...   183   1e-43
ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycin...   182   2e-43

>ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|222854741|gb|EEE92288.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  187 bits (474), Expect = 8e-45
 Identities = 97/161 (60%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
 Frame = +2

Query: 593  IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 772
            IVLKV MHCEACARKV R+L+ FEGVE+V TD K+  V+VKGK ADP KVCER+QKKSGR
Sbjct: 31   IVLKVDMHCEACARKVARALKGFEGVEEVSTDSKASKVVVKGKAADPSKVCERLQKKSGR 90

Query: 773  KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXXLTLVLKINMHCEACCQVLQKRIRKI 943
            KVE+ISPL                           +T+VL + MHCEAC QVLQKR+RKI
Sbjct: 91   KVELISPLPKPPEEKKEEAKDPPKEEEKKDEPPPVVTVVLNVRMHCEACAQVLQKRVRKI 150

Query: 944  DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVV 1066
             GVESVET+L N+QV+VKG++DP+ +V+ VYKKTRKQA +V
Sbjct: 151  QGVESVETNLANDQVIVKGVVDPSKLVDDVYKKTRKQASIV 191



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 1254 DVKKSEYWPPKYYIEYAYPPEIFSDENPNACSVM 1355
            D+K+SEYWP KYY E+AY P+IFSDENPNACSVM
Sbjct: 228  DIKRSEYWPSKYYSEFAYAPQIFSDENPNACSVM 261


>ref|XP_002273672.2| PREDICTED: uncharacterized protein LOC100257542 [Vitis vinifera]
            gi|297735874|emb|CBI18633.3| unnamed protein product
            [Vitis vinifera]
          Length = 267

 Score =  184 bits (467), Expect = 5e-44
 Identities = 97/162 (59%), Positives = 116/162 (71%), Gaps = 2/162 (1%)
 Frame = +2

Query: 593  IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 772
            IVLKV MHCEACARKV R+L+ F+GVEDV TD K+  V+VKGKTADPIKVCERIQKKSGR
Sbjct: 37   IVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSGR 96

Query: 773  KVEIISPL--XXXXXXXXXXXXXXXXXXXXXXXXLTLVLKINMHCEACCQVLQKRIRKID 946
            KVE+ISPL                          +T VLK+ MHCEAC QVLQ+RIRK  
Sbjct: 97   KVELISPLPKPPEENKEEPKEAKEEEKKEEPPPVITAVLKVYMHCEACAQVLQRRIRKFP 156

Query: 947  GVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPQ 1072
            GVESV TD+ N+Q +VKGI++P  +V+ V KKTRKQA++V +
Sbjct: 157  GVESVTTDVANDQAIVKGIIEPAKLVDYVNKKTRKQAYIVKE 198



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
 Frame = +3

Query: 1248 KTDVKKSEYWPPKYYIEYA-YPPEIFSDENPNACSVM 1355
            KTDVK+SEYWP K Y+E+A YPP+ FSDENPNACSVM
Sbjct: 231  KTDVKRSEYWPTKDYLEFASYPPQYFSDENPNACSVM 267


>ref|XP_003534939.1| PREDICTED: uncharacterized protein LOC100807490 isoform 2 [Glycine
            max]
          Length = 259

 Score =  183 bits (464), Expect = 1e-43
 Identities = 95/164 (57%), Positives = 117/164 (71%), Gaps = 4/164 (2%)
 Frame = +2

Query: 593  IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 772
            IVLKV MHCEACARKV ++L+ FEGVE+V  D K+  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 23   IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKASKVVVKGKAADPIKVCERLQKKSGK 82

Query: 773  KVEIISPLXXXXXXXXXXXXXXXXXXXXXXXXL----TLVLKINMHCEACCQVLQKRIRK 940
            KVE+ISPL                        L    T+VLK+ MHCEAC QV+QKRIRK
Sbjct: 83   KVELISPLPKPPEEKKEEEIKEEPQPEEKKEELPPVVTVVLKVRMHCEACAQVIQKRIRK 142

Query: 941  IDGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPQ 1072
            I GVESVET L N+QV+VKG++DP  +V+ VYK+T+KQA +V +
Sbjct: 143  IQGVESVETSLGNDQVIVKGVIDPAKLVDYVYKRTKKQASIVKE 186


>ref|XP_003534938.1| PREDICTED: uncharacterized protein LOC100807490 isoform 1 [Glycine
            max]
          Length = 267

 Score =  183 bits (464), Expect = 1e-43
 Identities = 95/164 (57%), Positives = 117/164 (71%), Gaps = 4/164 (2%)
 Frame = +2

Query: 593  IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 772
            IVLKV MHCEACARKV ++L+ FEGVE+V  D K+  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31   IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKASKVVVKGKAADPIKVCERLQKKSGK 90

Query: 773  KVEIISPLXXXXXXXXXXXXXXXXXXXXXXXXL----TLVLKINMHCEACCQVLQKRIRK 940
            KVE+ISPL                        L    T+VLK+ MHCEAC QV+QKRIRK
Sbjct: 91   KVELISPLPKPPEEKKEEEIKEEPQPEEKKEELPPVVTVVLKVRMHCEACAQVIQKRIRK 150

Query: 941  IDGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPQ 1072
            I GVESVET L N+QV+VKG++DP  +V+ VYK+T+KQA +V +
Sbjct: 151  IQGVESVETSLGNDQVIVKGVIDPAKLVDYVYKRTKKQASIVKE 194


>ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycine max]
            gi|255633318|gb|ACU17016.1| unknown [Glycine max]
          Length = 262

 Score =  182 bits (463), Expect = 2e-43
 Identities = 93/161 (57%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
 Frame = +2

Query: 593  IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 772
            IVLKV MHCEACARKV ++L+ F+GVE+V  D ++  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31   IVLKVDMHCEACARKVAKALKGFQGVEEVSADSRTSKVVVKGKAADPIKVCERLQKKSGK 90

Query: 773  KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXXLTLVLKINMHCEACCQVLQKRIRKI 943
            KVE+ISPL                           +T+VLK+ MHCEAC QV+QKRIRKI
Sbjct: 91   KVELISPLPKPPEEKEEPPKEEPPKEEKKYEPPPVVTVVLKVRMHCEACAQVIQKRIRKI 150

Query: 944  DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVV 1066
             GVESVETDL N+QV+VKG++DP  +V+ VYK+T+KQA +V
Sbjct: 151  KGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIV 191



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 1245 SKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACSVM 1355
            +KT++K+SEYWP K YI+YAY PEIFSDENPNACSVM
Sbjct: 226  NKTEIKRSEYWPSKNYIDYAYDPEIFSDENPNACSVM 262


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