BLASTX nr result

ID: Coptis25_contig00000332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000332
         (1854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529072.1| PREDICTED: vacuolar protein sorting-associat...    79   5e-12
ref|XP_003517627.1| PREDICTED: vacuolar protein sorting-associat...    79   5e-12
gb|ACU23713.1| unknown [Glycine max]                                   79   5e-12
ref|XP_002466250.1| hypothetical protein SORBIDRAFT_01g004370 [S...    78   9e-12
ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associat...    77   2e-11

>ref|XP_003529072.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Glycine max]
          Length = 218

 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 115
           NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 155



 Score = 49.3 bits (116), Expect(2) = 3e-08
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 115 AAIKCLKKKRHYEYQIEKLGDLQLRIHEQVAML 213
           AAI+CLK+KR YE QIE+LG+ QLRIH+Q+ +L
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILL 90



 Score = 36.6 bits (83), Expect(2) = 3e-08
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 315 IISLDGAKATIMSVDALKAGAATMKPILKAAYV 413
           +I L+GAKAT  +VDAL+ GAA MK + KA  +
Sbjct: 87  MILLEGAKATTETVDALRTGAAAMKAMQKATNI 119


>ref|XP_003517627.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Glycine max]
          Length = 329

 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 115
           NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE
Sbjct: 229 NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 266



 Score = 50.4 bits (119), Expect(2) = 1e-08
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +1

Query: 115 AAIKCLKKKRHYEYQIEKLGDLQLRIHEQVAML 213
           AAI+CLK+KR YE QIE+LG+ QLRIH+Q+ ML
Sbjct: 169 AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIML 201



 Score = 37.0 bits (84), Expect(2) = 1e-08
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 315 IISLDGAKATIMSVDALKAGAATMKPILKAAYV 413
           +I L+GAKAT  +VDAL+ GAA MK + KA  +
Sbjct: 198 MIMLEGAKATTETVDALRTGAAAMKAMQKATNI 230


>gb|ACU23713.1| unknown [Glycine max]
          Length = 164

 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 115
           NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE
Sbjct: 114 NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 151



 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 115 AAIKCLKKKRHYEYQIEKLGDLQLRIHEQVAML 213
           AAI+CLK+KR YE QIE+LG+ QLRIH+Q+ +L
Sbjct: 54  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILL 86



 Score = 36.6 bits (83), Expect(2) = 4e-08
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 315 IISLDGAKATIMSVDALKAGAATMKPILKAAYV 413
           +I L+GAKAT  +VDAL+ GAA MK + KA  +
Sbjct: 83  MILLEGAKATTETVDALRTGAAAMKAMQKATNI 115


>ref|XP_002466250.1| hypothetical protein SORBIDRAFT_01g004370 [Sorghum bicolor]
           gi|241920104|gb|EER93248.1| hypothetical protein
           SORBIDRAFT_01g004370 [Sorghum bicolor]
          Length = 191

 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 115
           NIDDVDKTMDEINEQTENMKQIQDALSAP+GAAADFDE
Sbjct: 91  NIDDVDKTMDEINEQTENMKQIQDALSAPLGAAADFDE 128



 Score = 45.8 bits (107), Expect(2) = 1e-06
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +1

Query: 115 AAIKCLKKKRHYEYQIEKLGDLQLRIHEQVAML 213
           AAI+ LK+K+ YE QIE+LG+ QLRIH+Q+ ML
Sbjct: 31  AAIQALKRKKLYEQQIEQLGNFQLRIHDQMIML 63



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +3

Query: 315 IISLDGAKATIMSVDALKAGAATMKPILKAAYV 413
           +I L+ AKAT  +VDAL+ GAA MK + KA  +
Sbjct: 60  MIMLEAAKATTETVDALRTGAAAMKAMQKATNI 92


>ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Cucumis sativus]
           gi|449487999|ref|XP_004157906.1| PREDICTED: vacuolar
           protein sorting-associated protein 32 homolog 2-like
           [Cucumis sativus]
          Length = 218

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   NIDDVDKTMDEINEQTENMKQIQDALSAPIGAAADFDE 115
           NIDDVDKTMDEINEQTENMKQIQ+ALSAPIGAAADFDE
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEALSAPIGAAADFDE 155



 Score = 50.4 bits (119), Expect(2) = 3e-08
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +1

Query: 115 AAIKCLKKKRHYEYQIEKLGDLQLRIHEQVAML 213
           AAI+CLK+KR YE QIE+LG+ QLRIH+Q+ ML
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIML 90



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 315 IISLDGAKATIMSVDALKAGAATMKPILKAAYV 413
           +I L+GAKAT  +VDAL+ GA+ MK + KA  +
Sbjct: 87  MIMLEGAKATTETVDALRTGASAMKAMQKATNI 119


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