BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000306
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea ma...   163   6e-38
gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| T...   163   6e-38
pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal ...   162   1e-37
ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|1...   161   2e-37
gb|ABK93590.1| unknown [Populus trichocarpa]                          161   2e-37

>ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea mays]
           gi|195606206|gb|ACG24933.1| 60S ribosomal protein L13a
           [Zea mays]
          Length = 206

 Score =  163 bits (412), Expect = 6e-38
 Identities = 77/93 (82%), Positives = 79/93 (84%)
 Frame = -3

Query: 910 MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPP 731
           MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT            YEGVPPP
Sbjct: 57  MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGEAALARLKTYEGVPPP 116

Query: 730 YDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 632
           YDK KRMVIPDA+KVLRLQPGHKYCLLG+LS E
Sbjct: 117 YDKTKRMVIPDALKVLRLQPGHKYCLLGELSKE 149


>gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| TPA: ribosomal
           protein L13A-like protein [Zea mays]
          Length = 206

 Score =  163 bits (412), Expect = 6e-38
 Identities = 77/93 (82%), Positives = 79/93 (84%)
 Frame = -3

Query: 910 MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPP 731
           MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT            YEGVPPP
Sbjct: 57  MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGEAALARLKTYEGVPPP 116

Query: 730 YDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 632
           YDK KRMVIPDA+KVLRLQPGHKYCLLG+LS E
Sbjct: 117 YDKTKRMVIPDALKVLRLQPGHKYCLLGELSKE 149


>pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471706|gb|AAW50984.1| ribosomal protein
           L13a [Triticum aestivum] gi|326516494|dbj|BAJ92402.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 206

 Score =  162 bits (409), Expect = 1e-37
 Identities = 77/93 (82%), Positives = 80/93 (86%)
 Frame = -3

Query: 910 MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPP 731
           MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT           AYEGVPPP
Sbjct: 57  MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPP 116

Query: 730 YDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 632
           YD+ KRMVIPDA+KVLRLQPGH+YCLLGQLS E
Sbjct: 117 YDRTKRMVIPDALKVLRLQPGHRYCLLGQLSKE 149


>ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|118488226|gb|ABK95932.1|
           unknown [Populus trichocarpa]
           gi|222866774|gb|EEF03905.1| predicted protein [Populus
           trichocarpa]
          Length = 206

 Score =  161 bits (408), Expect = 2e-37
 Identities = 76/93 (81%), Positives = 79/93 (84%)
 Frame = -3

Query: 910 MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPP 731
           MKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKT            +EGVPPP
Sbjct: 57  MKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKVFEGVPPP 116

Query: 730 YDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 632
           YDK KRMVIPDA+KVLRLQPGHKYCLLGQLS E
Sbjct: 117 YDKTKRMVIPDALKVLRLQPGHKYCLLGQLSSE 149


>gb|ABK93590.1| unknown [Populus trichocarpa]
          Length = 206

 Score =  161 bits (408), Expect = 2e-37
 Identities = 76/93 (81%), Positives = 79/93 (84%)
 Frame = -3

Query: 910 MKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPP 731
           MKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKT            +EGVPPP
Sbjct: 57  MKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKVFEGVPPP 116

Query: 730 YDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 632
           YDK KRMVIPDA+KVLRLQPGHKYCLLGQLS E
Sbjct: 117 YDKTKRMVIPDALKVLRLQPGHKYCLLGQLSSE 149