BLASTX nr result
ID: Coptis25_contig00000295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000295
(1281 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2... 265 4e-91
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas... 262 1e-90
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas... 265 1e-90
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu... 260 1e-90
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas... 258 2e-87
>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
predicted protein [Populus trichocarpa]
Length = 932
Score = 265 bits (676), Expect(2) = 4e-91
Identities = 128/160 (80%), Positives = 144/160 (90%)
Frame = -3
Query: 1123 GFRAAEEVIYGRDTSRASVSYLADASWLARKILTIWNMEKSMTIHGEPPPWRKRVSFVGP 944
G RAAEEVIYGRDTSRASVSYLADASWLARKI+TIWN+E M IHGEPPPWRK+V F+GP
Sbjct: 753 GGRAAEEVIYGRDTSRASVSYLADASWLARKIITIWNLENPMVIHGEPPPWRKKVRFMGP 812
Query: 943 RLDFEGSLYDDYDLIEPPINFNLDDEVAQRTEELIRDMYERTVSLQWRHHAALLKTIKVL 764
RLDFEGSLYDDYDLIEPPINFNLDD+VAQRTE+LI DMY RTVSL RHHAALLK +KVL
Sbjct: 813 RLDFEGSLYDDYDLIEPPINFNLDDQVAQRTEKLICDMYGRTVSLLKRHHAALLKAVKVL 872
Query: 763 LDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFFE 644
L++KEISGE+I+YIL+ YP +T + LLEEE+PG LPFF+
Sbjct: 873 LNQKEISGEEIDYILNNYPPQTRLSLLLEEENPGILPFFK 912
Score = 98.2 bits (243), Expect(2) = 4e-91
Identities = 45/55 (81%), Positives = 53/55 (96%)
Frame = -2
Query: 1280 MTSYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLHRLQ 1116
MTS+LL+RYE+AKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FER PQLLHRLQ
Sbjct: 695 MTSHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERLPQLLHRLQ 749
>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
chloroplastic-like [Glycine max]
Length = 925
Score = 262 bits (670), Expect(2) = 1e-90
Identities = 128/163 (78%), Positives = 144/163 (88%)
Frame = -3
Query: 1138 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWLARKILTIWNMEKSMTIHGEPPPWRKRV 959
L G RAAEEVIYGRDTS+ASV YLADASWLARKILTIWN+E M IHGEPPPWRK V
Sbjct: 743 LQVLLGGRAAEEVIYGRDTSKASVDYLADASWLARKILTIWNLENPMVIHGEPPPWRKSV 802
Query: 958 SFVGPRLDFEGSLYDDYDLIEPPINFNLDDEVAQRTEELIRDMYERTVSLQWRHHAALLK 779
FVGPRLDFEGSLYDDY+LIEPP+NF +DD+VAQRTEELIRDMY +TVSL RHHAALLK
Sbjct: 803 KFVGPRLDFEGSLYDDYNLIEPPLNFKMDDQVAQRTEELIRDMYRKTVSLLRRHHAALLK 862
Query: 778 TIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPF 650
TIKVLLD+KEISGE+IE+IL++YP +TP+ +LLEEE G+LPF
Sbjct: 863 TIKVLLDQKEISGEEIEFILNKYPPQTPI-YLLEEEYAGNLPF 904
Score = 99.0 bits (245), Expect(2) = 1e-90
Identities = 45/55 (81%), Positives = 53/55 (96%)
Frame = -2
Query: 1280 MTSYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLHRLQ 1116
+TS+LL+RYE AKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FERRPQLLHRLQ
Sbjct: 690 LTSHLLRRYEHAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQ 744
>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
gi|296090151|emb|CBI39970.3| unnamed protein product
[Vitis vinifera]
Length = 907
Score = 265 bits (678), Expect(2) = 1e-90
Identities = 127/163 (77%), Positives = 144/163 (88%)
Frame = -3
Query: 1138 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWLARKILTIWNMEKSMTIHGEPPPWRKRV 959
L G RAAEEVIYGRDTSRASV YLADASWLARKILTIWN+E M IHGEPPPWRK+V
Sbjct: 724 LQVLLGGRAAEEVIYGRDTSRASVDYLADASWLARKILTIWNLENPMVIHGEPPPWRKKV 783
Query: 958 SFVGPRLDFEGSLYDDYDLIEPPINFNLDDEVAQRTEELIRDMYERTVSLQWRHHAALLK 779
FVGPRLDFEGSLYDDY LIEPP+NFNLDD+VAQRTEELI DMY +T++L RHHAALLK
Sbjct: 784 KFVGPRLDFEGSLYDDYGLIEPPVNFNLDDQVAQRTEELISDMYGKTLTLLRRHHAALLK 843
Query: 778 TIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPF 650
T+KVL+++KEISGE+I++IL+ YP +TPV LLEEE+PGSLPF
Sbjct: 844 TVKVLVEQKEISGEEIDFILNSYPPQTPVSCLLEEENPGSLPF 886
Score = 95.9 bits (237), Expect(2) = 1e-90
Identities = 44/55 (80%), Positives = 52/55 (94%)
Frame = -2
Query: 1280 MTSYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLHRLQ 1116
+TS+LL+RYE AKVE C+RIS+IPRGQ+LSQ+VF RLDDESY+FERRPQLLHRLQ
Sbjct: 671 ITSHLLRRYESAKVERCDRISVIPRGQTLSQVVFDRLDDESYMFERRPQLLHRLQ 725
>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
putative [Ricinus communis]
Length = 925
Score = 260 bits (665), Expect(2) = 1e-90
Identities = 128/176 (72%), Positives = 148/176 (84%), Gaps = 2/176 (1%)
Frame = -3
Query: 1138 LSCCTGFRAAEEVIYGRDTSRASVSYLADASWLARKILTIWNMEKSMTIHGEPPPWRKRV 959
L G RAAEEVIYGR+TSRAS+ YLADASWLARKI+TIWN+E M IHGEPPPWRK+V
Sbjct: 744 LQVLLGARAAEEVIYGRNTSRASIPYLADASWLARKIITIWNLENPMVIHGEPPPWRKKV 803
Query: 958 SFVGPRLDFEGSLYDDYDLIEPPINFNLDDEVAQRTEELIRDMYERTVSLQWRHHAALLK 779
FVGPRLDFEGSLYDDY LIEPPINFNLDD+VAQRTE+LI DMYE+TVSL RHHAALLK
Sbjct: 804 RFVGPRLDFEGSLYDDYGLIEPPINFNLDDQVAQRTEKLINDMYEKTVSLLRRHHAALLK 863
Query: 778 TIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFF--EM*QKRDFEL 617
+KVL+++KEISG +I+YIL+ YP +T + LLEEE+PGSLPF E + D+EL
Sbjct: 864 AVKVLINQKEISGNEIDYILNNYPPQTCISLLLEEENPGSLPFTKNEQGHEVDYEL 919
Score = 100 bits (249), Expect(2) = 1e-90
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -2
Query: 1280 MTSYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLHRLQ 1116
MTS+LL+ YEDAKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FERRPQLLHRLQ
Sbjct: 691 MTSHLLRLYEDAKVECCDRISIVPRGQTLSQVVFHRLDDESYMFERRPQLLHRLQ 745
>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
sativus]
Length = 962
Score = 258 bits (659), Expect(2) = 2e-87
Identities = 122/176 (69%), Positives = 149/176 (84%), Gaps = 8/176 (4%)
Frame = -3
Query: 1123 GFRAAEEVIYGRDTSRASVSYLADASWLARKILTIWNMEKSMTIHGEPPPWRKRVSFVGP 944
G RAAEEVIYGRDTS+ASVSYLADASWLARKI+TIWN+E M IHGEPPPWR+ +F+GP
Sbjct: 775 GARAAEEVIYGRDTSKASVSYLADASWLARKIITIWNLENPMVIHGEPPPWRREANFIGP 834
Query: 943 RLDFEGSLYDDYDLIEPPINFNLDDEVAQRTEELIRDMYERTVSLQWRHHAALLKTIKVL 764
RLDFEGSLY+DY+L EPP+NFNLDDEVA+RTE LIRDMY+RT+++ RHHAALLK +KVL
Sbjct: 835 RLDFEGSLYNDYNLTEPPLNFNLDDEVARRTEALIRDMYDRTLAMLQRHHAALLKAVKVL 894
Query: 763 LDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFF--------EM*QKRDFE 620
+ ++EISGE+I++ILD YP +TP+ +L+EE+PGSLPF E Q+RDFE
Sbjct: 895 ITQEEISGEEIDFILDNYPQQTPISVVLQEENPGSLPFVKRKRENEQEREQERDFE 950
Score = 92.4 bits (228), Expect(2) = 2e-87
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = -2
Query: 1280 MTSYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLHRLQ 1116
+TS+LL+R+E AKVE C+RISIIPRG +LSQ+VF RLDDESY+FERRPQLLHRLQ
Sbjct: 717 ITSHLLRRFESAKVECCDRISIIPRGWTLSQVVFRRLDDESYMFERRPQLLHRLQ 771