BLASTX nr result

ID: Coptis25_contig00000272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000272
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274926.1| PREDICTED: ADP-ribosylation factor [Vitis vi...   363   6e-98
dbj|BAJ99258.1| predicted protein [Hordeum vulgare subsp. vulgare]    357   2e-96
gb|AAW67545.1| ADP-ribosylation factor [Daucus carota]                355   1e-95
ref|XP_002319891.1| predicted protein [Populus trichocarpa] gi|2...   355   1e-95
ref|XP_002454435.1| hypothetical protein SORBIDRAFT_04g030910 [S...   354   3e-95

>ref|XP_002274926.1| PREDICTED: ADP-ribosylation factor [Vitis vinifera]
           gi|147778405|emb|CAN63035.1| hypothetical protein
           VITISV_023129 [Vitis vinifera]
           gi|297737336|emb|CBI26537.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  363 bits (931), Expect = 6e-98
 Identities = 175/182 (96%), Positives = 179/182 (98%)
 Frame = +3

Query: 159 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 338
           MGQAFRKLFD FFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 339 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 518
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV
Sbjct: 61  VMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 120

Query: 519 ILVFANKQDMKGAMTPMEVCEGLGLYGLKNRRWHIQGACALKGDGLYEGLDWLAGTLKEL 698
           IL+FANKQDMKGAMTPMEVCEGLGLY LKNR+WHIQG CALKGDGLYEGLDWLAGTLKEL
Sbjct: 121 ILIFANKQDMKGAMTPMEVCEGLGLYDLKNRKWHIQGTCALKGDGLYEGLDWLAGTLKEL 180

Query: 699 KA 704
           +A
Sbjct: 181 RA 182


>dbj|BAJ99258.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 191

 Score =  357 bits (917), Expect = 2e-96
 Identities = 173/182 (95%), Positives = 178/182 (97%)
 Frame = +3

Query: 159 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 338
           MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 339 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 518
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAII DPFMLNSV
Sbjct: 61  VLFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIINDPFMLNSV 120

Query: 519 ILVFANKQDMKGAMTPMEVCEGLGLYGLKNRRWHIQGACALKGDGLYEGLDWLAGTLKEL 698
           ILVFANKQDMKGAMTPMEVCEGLGLY LKNR WHIQG+CALKGDGLYEGLDWL+ TLK+L
Sbjct: 121 ILVFANKQDMKGAMTPMEVCEGLGLYDLKNRMWHIQGSCALKGDGLYEGLDWLSSTLKDL 180

Query: 699 KA 704
           +A
Sbjct: 181 QA 182


>gb|AAW67545.1| ADP-ribosylation factor [Daucus carota]
          Length = 192

 Score =  355 bits (911), Expect = 1e-95
 Identities = 171/182 (93%), Positives = 176/182 (96%)
 Frame = +3

Query: 159 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 338
           MGQ FRKLFD FFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQVFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 339 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 518
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAII+DPFMLNS+
Sbjct: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIKDPFMLNSI 120

Query: 519 ILVFANKQDMKGAMTPMEVCEGLGLYGLKNRRWHIQGACALKGDGLYEGLDWLAGTLKEL 698
           ILVFANKQDMKGAM+PMEVCEGLGL  LKNR+WHIQG CALKGDGLYEGLDWLA TLKEL
Sbjct: 121 ILVFANKQDMKGAMSPMEVCEGLGLLDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKEL 180

Query: 699 KA 704
           KA
Sbjct: 181 KA 182


>ref|XP_002319891.1| predicted protein [Populus trichocarpa] gi|222858267|gb|EEE95814.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  355 bits (911), Expect = 1e-95
 Identities = 169/182 (92%), Positives = 178/182 (97%)
 Frame = +3

Query: 159 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 338
           MGQAFRKLFD FFGN+EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQAFRKLFDTFFGNTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 339 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 518
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQ II+DPFMLNSV
Sbjct: 61  VVFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQTIIKDPFMLNSV 120

Query: 519 ILVFANKQDMKGAMTPMEVCEGLGLYGLKNRRWHIQGACALKGDGLYEGLDWLAGTLKEL 698
           ILVFANKQDMKGAMTPMEVCEGLGL+ LKNR+WHIQG CAL+GDGLYEGLDWL+GTLKE+
Sbjct: 121 ILVFANKQDMKGAMTPMEVCEGLGLFELKNRKWHIQGTCALRGDGLYEGLDWLSGTLKEM 180

Query: 699 KA 704
           +A
Sbjct: 181 RA 182


>ref|XP_002454435.1| hypothetical protein SORBIDRAFT_04g030910 [Sorghum bicolor]
           gi|241934266|gb|EES07411.1| hypothetical protein
           SORBIDRAFT_04g030910 [Sorghum bicolor]
          Length = 194

 Score =  354 bits (908), Expect = 3e-95
 Identities = 173/182 (95%), Positives = 176/182 (96%)
 Frame = +3

Query: 159 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 338
           MGQAFRKLFDAFFG SEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN
Sbjct: 1   MGQAFRKLFDAFFGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKN 60

Query: 339 VIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIIRDPFMLNSV 518
           V+FTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAII DP MLNSV
Sbjct: 61  VMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIINDPLMLNSV 120

Query: 519 ILVFANKQDMKGAMTPMEVCEGLGLYGLKNRRWHIQGACALKGDGLYEGLDWLAGTLKEL 698
           ILVFANKQDMKGAMTPMEVCEGLGLY LKNR WHIQG+CALKGDGLYEGLDWLA TLKEL
Sbjct: 121 ILVFANKQDMKGAMTPMEVCEGLGLYDLKNRIWHIQGSCALKGDGLYEGLDWLASTLKEL 180

Query: 699 KA 704
           +A
Sbjct: 181 QA 182


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