BLASTX nr result
ID: Coptis25_contig00000238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000238
(1974 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ... 574 0.0
ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [G... 556 0.0
ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycin... 555 0.0
gb|ADC53238.1| clathrin-associated adaptor complexes medium subu... 561 0.0
ref|XP_004139522.1| PREDICTED: AP-3 complex subunit mu-1-like [C... 556 0.0
>ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera]
gi|296089804|emb|CBI39623.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 574 bits (1480), Expect(2) = 0.0
Identities = 277/334 (82%), Positives = 310/334 (92%), Gaps = 4/334 (1%)
Frame = +3
Query: 66 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSIS----SKLPPVIASPTHYLFQI 233
MLQCIFL+SDSGEVMLEKQLTGHRVDRSIC WFW+Q++S +KLPPVIASPTHY+FQI
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWEQTVSQADSTKLPPVIASPTHYIFQI 60
Query: 234 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 413
REGITFLACTQVEM PLM +EFL RVADVLS+YLGGLNED+IKDNF+IVYELLDEMIDN
Sbjct: 61 TREGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120
Query: 414 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 593
GFPLTTEPNILREMIA PNIVSKVL VVTGN SNVSNTLPGATAS +PWR+ + KHA NE
Sbjct: 121 GFPLTTEPNILREMIALPNIVSKVLGVVTGNSSNVSNTLPGATASCVPWRSTEPKHANNE 180
Query: 594 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 773
VYVDL+EEMDA+I+RDG+LVKCEIYGEV+V LSGLPDLTLSFANPS+LNDVRFHPCVR
Sbjct: 181 VYVDLLEEMDAVINRDGILVKCEIYGEVEVNSHLSGLPDLTLSFANPSILNDVRFHPCVR 240
Query: 774 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 953
FRPWES+ +LSFVPPDGQFKLMSYRVKKL++TPIYVKPQL+SDAGTCRLSVLVG R+D G
Sbjct: 241 FRPWESNNILSFVPPDGQFKLMSYRVKKLRSTPIYVKPQLTSDAGTCRLSVLVGIRSDPG 300
Query: 954 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADK 1055
KT+DS+ VQF+LPPC+ SA+L+SNHGTV+ILA+K
Sbjct: 301 KTIDSVTVQFQLPPCILSANLSSNHGTVSILANK 334
Score = 145 bits (366), Expect(2) = 0.0
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +2
Query: 1127 TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 1306
TC+WSIGRIPKDKAPS+SGTL LE G+ERLHVFPTFQV F+IMGVALSGLQID LD+KN
Sbjct: 335 TCSWSIGRIPKDKAPSLSGTLTLETGMERLHVFPTFQVGFRIMGVALSGLQIDTLDIKNL 394
Query: 1307 PSPPYKGFRALTQAGKYEVRS 1369
PS PYKGFRALTQAG+YEVRS
Sbjct: 395 PSRPYKGFRALTQAGQYEVRS 415
>ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
Length = 415
Score = 556 bits (1432), Expect(2) = 0.0
Identities = 271/334 (81%), Positives = 304/334 (91%), Gaps = 4/334 (1%)
Frame = +3
Query: 66 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 233
MLQCIFL+SDSGEVMLEKQL+GHRVDRSIC+WFWDQ+IS K PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDSFKQQPVIASPTHYLFQV 60
Query: 234 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 413
REGITFLACTQVEM PLMA+EFL RVADVL++YLGGLNEDLIKDNFIIVYELLDEMIDN
Sbjct: 61 FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFIIVYELLDEMIDN 120
Query: 414 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 593
GFPLTTEPNIL+EMIAPPNIVSKVLSVVTG+ SNVS+TLPGATAS +PWRT D K+A NE
Sbjct: 121 GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPGATASLVPWRTADTKYANNE 180
Query: 594 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 773
VYVDLVEEMDA I+RDG+LVKCEI GEVQV ++GLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 774 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 953
+RPWES+Q+LSFVPPDG+FKLMSYRV KLKNTPIYVKPQ +SD G CR+SVLVG RND G
Sbjct: 241 YRPWESNQILSFVPPDGRFKLMSYRVGKLKNTPIYVKPQFTSDGGRCRVSVLVGIRNDPG 300
Query: 954 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADK 1055
KT+D++ VQF+LP C+ SADL+SN+G VNILA+K
Sbjct: 301 KTIDNVTVQFQLPSCILSADLSSNYGIVNILANK 334
Score = 138 bits (347), Expect(2) = 0.0
Identities = 68/80 (85%), Positives = 73/80 (91%)
Frame = +2
Query: 1130 CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 1309
C+WSIGRIPKDKAPSMSGTLVLE GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK P
Sbjct: 336 CSWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVP 395
Query: 1310 SPPYKGFRALTQAGKYEVRS 1369
YKGFRALT+AG++EVRS
Sbjct: 396 YRFYKGFRALTRAGEFEVRS 415
>ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycine max]
gi|255641304|gb|ACU20929.1| unknown [Glycine max]
Length = 415
Score = 555 bits (1430), Expect(2) = 0.0
Identities = 268/334 (80%), Positives = 305/334 (91%), Gaps = 4/334 (1%)
Frame = +3
Query: 66 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISSKLP----PVIASPTHYLFQI 233
MLQCIFL+SDSGEVMLEKQL+GHRVDRSIC+WFWDQ+IS P PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLSGHRVDRSICAWFWDQAISQPDPFKQQPVIASPTHYLFQV 60
Query: 234 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 413
REGITFLACTQVEM PLMA+EFL RVADVL++YLGGLNEDLIKDNF+IVYELLDEMIDN
Sbjct: 61 FREGITFLACTQVEMPPLMAIEFLCRVADVLNDYLGGLNEDLIKDNFVIVYELLDEMIDN 120
Query: 414 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 593
GFPLTTEPNIL+EMIAPPNIVSKVLSVVTG+ SNVS+TLP ATAS +PWRT D K+A NE
Sbjct: 121 GFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPVATASLVPWRTADTKYANNE 180
Query: 594 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 773
VYVDLVEEMDA I+RDG+LVKCEI GEVQV ++GLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 774 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 953
++PWES+Q+LSFVPPDGQFKLMSYR++KLKNTPIYVKPQL+SD G CR+S+LVG RND G
Sbjct: 241 YQPWESNQILSFVPPDGQFKLMSYRIRKLKNTPIYVKPQLTSDGGACRVSILVGIRNDPG 300
Query: 954 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADK 1055
KT+D++ +QF+LP C+ SADLTSN+G VNILA+K
Sbjct: 301 KTIDNVTLQFQLPSCILSADLTSNYGIVNILANK 334
Score = 139 bits (349), Expect(2) = 0.0
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +2
Query: 1127 TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 1306
TC+WSIGRIPKDKAPSMSGTLVLE GL+RLHVFPTFQV F+IMGVALSGLQIDKLDLK
Sbjct: 335 TCSWSIGRIPKDKAPSMSGTLVLETGLDRLHVFPTFQVGFRIMGVALSGLQIDKLDLKTV 394
Query: 1307 PSPPYKGFRALTQAGKYEVRS 1369
P YKGFRALT+AG++EVRS
Sbjct: 395 PYRFYKGFRALTRAGEFEVRS 415
>gb|ADC53238.1| clathrin-associated adaptor complexes medium subunit [Gossypium
hirsutum]
Length = 415
Score = 561 bits (1446), Expect(2) = 0.0
Identities = 272/334 (81%), Positives = 301/334 (90%), Gaps = 4/334 (1%)
Frame = +3
Query: 66 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 233
MLQCIFL+SDSGEVMLEKQLTGHRVDRSIC WFWD IS K PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWDHVISQGDSFKSQPVIASPTHYLFQV 60
Query: 234 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 413
REGITFLACTQVEM PLM +EFL RV+DVLS+YLGGLNED+IKDNF+IVYELLDEMIDN
Sbjct: 61 VREGITFLACTQVEMPPLMGIEFLCRVSDVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120
Query: 414 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 593
GFPLTTE NILREMIAPPNIVSKVLSVVTGN SNVS+TLPGAT S IPWR + K+A NE
Sbjct: 121 GFPLTTEANILREMIAPPNIVSKVLSVVTGNSSNVSDTLPGATRSCIPWRAAEPKYANNE 180
Query: 594 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 773
VYVDLVEEMDA+I+RDG LVKCE+YGEV+V LSGLPDLTLSFANPS+L+DVRFHPCVR
Sbjct: 181 VYVDLVEEMDAVINRDGALVKCEVYGEVRVNSHLSGLPDLTLSFANPSILDDVRFHPCVR 240
Query: 774 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 953
FRPWESHQVLSFVPPDG+FKLMSYR+KKLK+TP+YVKPQL+SDAG CR++VLVG RND G
Sbjct: 241 FRPWESHQVLSFVPPDGEFKLMSYRIKKLKSTPLYVKPQLTSDAGKCRVNVLVGIRNDPG 300
Query: 954 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADK 1055
KT+DSI ++F+LPPC+ SADL SNHGTVNIL +K
Sbjct: 301 KTIDSITLEFQLPPCILSADLNSNHGTVNILGNK 334
Score = 132 bits (332), Expect(2) = 0.0
Identities = 63/80 (78%), Positives = 73/80 (91%)
Frame = +2
Query: 1130 CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 1309
C+W+IGRIPKDK PS+SGTL+LE LERLHVFPTF+V F+IMGVALSGLQIDKLDLK +P
Sbjct: 336 CSWTIGRIPKDKTPSLSGTLLLETELERLHVFPTFRVGFRIMGVALSGLQIDKLDLKTAP 395
Query: 1310 SPPYKGFRALTQAGKYEVRS 1369
S YKGFRALT+AG++EVRS
Sbjct: 396 SRLYKGFRALTRAGEFEVRS 415
>ref|XP_004139522.1| PREDICTED: AP-3 complex subunit mu-1-like [Cucumis sativus]
Length = 415
Score = 556 bits (1433), Expect(2) = 0.0
Identities = 270/334 (80%), Positives = 303/334 (90%), Gaps = 4/334 (1%)
Frame = +3
Query: 66 MLQCIFLVSDSGEVMLEKQLTGHRVDRSICSWFWDQSISS----KLPPVIASPTHYLFQI 233
MLQCIFL+SDSGE+MLEKQLTGHRVDRSIC WFW+QS+S KL PVIASPTHYLFQ+
Sbjct: 1 MLQCIFLLSDSGEIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFKLQPVIASPTHYLFQV 60
Query: 234 GREGITFLACTQVEMAPLMALEFLSRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 413
R GITFLACTQVEM PLM +EFL RVADVL++YLG LNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61 IRAGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
Query: 414 GFPLTTEPNILREMIAPPNIVSKVLSVVTGNGSNVSNTLPGATASSIPWRTMDLKHAKNE 593
GFPLTTEPNILRE+IAPPN+VSKVLSVVTGN SNVS+T+PGA AS +PWRT D K+AKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTVPGAIASHVPWRTTDPKYAKNE 180
Query: 594 VYVDLVEEMDAIISRDGMLVKCEIYGEVQVKCQLSGLPDLTLSFANPSVLNDVRFHPCVR 773
V VDLVEEMDAI++R+G L+KCEIYGEVQV LSGLPDLTLSF NPS+L+DVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRNGHLIKCEIYGEVQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
Query: 774 FRPWESHQVLSFVPPDGQFKLMSYRVKKLKNTPIYVKPQLSSDAGTCRLSVLVGTRNDSG 953
FRPWESHQ+LSFVPPDGQFKLMSYRV+KLKNTP+YVKPQ +SDAGTCR+SVLVG R+D G
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
Query: 954 KTVDSIMVQFRLPPCVASADLTSNHGTVNILADK 1055
K +DSI VQF+LP CV SADLTSN+GTVNIL++K
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK 334
Score = 132 bits (333), Expect(2) = 0.0
Identities = 61/80 (76%), Positives = 72/80 (90%)
Frame = +2
Query: 1130 CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 1309
C+W+IG+IPKDK PSMSGTL L GL++LHVFPTFQV FKIMGV LSGLQ+DKLD+KN P
Sbjct: 336 CSWTIGKIPKDKTPSMSGTLTLVTGLQQLHVFPTFQVRFKIMGVVLSGLQVDKLDVKNLP 395
Query: 1310 SPPYKGFRALTQAGKYEVRS 1369
+ PYKGFRALT+AG++EVRS
Sbjct: 396 NHPYKGFRALTRAGQFEVRS 415