BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000235
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   270   5e-70
ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512...   266   1e-68
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   265   1e-68
ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [V...   263   5e-68
gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]                263   9e-68

>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
            protein [Gossypium hirsutum]
          Length = 156

 Score =  270 bits (690), Expect = 5e-70
 Identities = 133/156 (85%), Positives = 142/156 (91%)
 Frame = -2

Query: 1079 MAEIQKKVTLKSSDGESFEVDEAVAVESQTIKHMIEDDCADDGIPLPNVTSKILSKVIEY 900
            M+   +K+TLKSSDGESFEVDEAVA+ESQTIKHMIEDDCAD+GIPLPNVTSKIL+KVIEY
Sbjct: 1    MSSSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEY 60

Query: 899  CKKHVETPKTEDRSVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 720
            CKKHVE PKT+DRS DDELK+WDA+FVKVDQATLFDLILAANYLNIK LLDLTCQTVADM
Sbjct: 61   CKKHVEAPKTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADM 120

Query: 719  IKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 612
            IKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 121  IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
            putative [Ricinus communis]
          Length = 157

 Score =  266 bits (679), Expect = 1e-68
 Identities = 134/153 (87%), Positives = 140/153 (91%), Gaps = 2/153 (1%)
 Frame = -2

Query: 1064 KKVTLKSSDGESFEVDEAVAVESQTIKHMIEDDCADDGIPLPNVTSKILSKVIEYCKKHV 885
            KK+TLKSSDGE+FEV+E VA+ESQTIKHMIEDDCAD GIPLPNVTSKILSKVIEYCKKHV
Sbjct: 5    KKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKKHV 64

Query: 884  ETPKTEDR--SVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 711
            ETPK+EDR  S DD+LKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 65   ETPKSEDRPSSADDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 124

Query: 710  KTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 612
            KTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 125  KTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
            putative [Ricinus communis]
          Length = 157

 Score =  265 bits (678), Expect = 1e-68
 Identities = 134/153 (87%), Positives = 141/153 (92%), Gaps = 2/153 (1%)
 Frame = -2

Query: 1064 KKVTLKSSDGESFEVDEAVAVESQTIKHMIEDDCADDGIPLPNVTSKILSKVIEYCKKHV 885
            +K+TLKSSDGE+FEVDEAVA+ESQTIKHMIEDDCAD+GIPLPNVTSKILSKVIEYCKKHV
Sbjct: 5    RKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64

Query: 884  ETPKTEDR--SVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 711
            ET K++DR  SVDDELK WDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 65   ETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 124

Query: 710  KTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 612
            KTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 125  KTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [Vitis vinifera]
            gi|147788379|emb|CAN76662.1| hypothetical protein
            VITISV_040452 [Vitis vinifera]
          Length = 156

 Score =  263 bits (673), Expect = 5e-68
 Identities = 132/152 (86%), Positives = 141/152 (92%), Gaps = 1/152 (0%)
 Frame = -2

Query: 1064 KKVTLKSSDGESFEVDEAVAVESQTIKHMIEDDCADDGIPLPNVTSKILSKVIEYCKKHV 885
            +K+TLKSSDGE+F+VDEAVA+ESQTIKHMIEDDCAD+GIPLPNVTSKILSKVIEYCKKHV
Sbjct: 5    RKITLKSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64

Query: 884  ETPKTEDRS-VDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 708
            E PK E+RS VD+ELKAWDA+FVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK
Sbjct: 65   EAPKPEERSGVDEELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGK 124

Query: 707  TPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 612
            TPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 125  TPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
          Length = 157

 Score =  263 bits (671), Expect = 9e-68
 Identities = 133/153 (86%), Positives = 139/153 (90%), Gaps = 2/153 (1%)
 Frame = -2

Query: 1064 KKVTLKSSDGESFEVDEAVAVESQTIKHMIEDDCADDGIPLPNVTSKILSKVIEYCKKHV 885
            +K+TLKSSDGE+ EVDEAVA+ESQTIKHMIEDDCAD+GIPLPNVTSKILSKVIEYCKKHV
Sbjct: 5    RKITLKSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64

Query: 884  ETPKTEDR--SVDDELKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 711
              PK EDR  SVDDELKAWDA+FVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG
Sbjct: 65   GAPKAEDRASSVDDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 124

Query: 710  KTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 612
            KTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 125  KTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157