BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000232
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   320   3e-85
ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   291   9e-77
ref|XP_003576019.1| PREDICTED: DNA replication complex GINS prot...   289   4e-76
tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea m...   285   1e-74
ref|XP_004135842.1| PREDICTED: probable DNA replication complex ...   284   2e-74

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  320 bits (819), Expect = 3e-85
 Identities = 150/195 (76%), Positives = 177/195 (90%)
 Frame = -1

Query: 606 MYGRRASQLLKDLSTNEPGQLSSFDTDAFDQVIKECDAHHIELQGMMRKIQEEGLDIQTT 427
           MYGRRA QL+K+ S+ E GQL+ F++D FDQV+KEC  H++ELQ +MRKIQEEG+DIQTT
Sbjct: 1   MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTT 60

Query: 426 RNADHYGAVIHHLALIRNKRCLMAYVYNRAEVIQSLRWKVGAVLPQEVQQKVNYSEEEYF 247
           RNADH+G VIHHL+L+RNKRCLMAYVYNRAE+I++LRWK+G VLPQE+ +K++YSEEEYF
Sbjct: 61  RNADHFGMVIHHLSLMRNKRCLMAYVYNRAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYF 120

Query: 246 KNHSAALESYMSEMEVDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 67
           KNHS ALESYMSE+E+DLTVDMVPPKDPYI+VRVLDDIG+V LSDQS NLA HS+HFLKR
Sbjct: 121 KNHSTALESYMSELELDLTVDMVPPKDPYIQVRVLDDIGEVLLSDQSANLACHSMHFLKR 180

Query: 66  TDAELFISQGLMEEL 22
            DAE FISQGLMEEL
Sbjct: 181 IDAEQFISQGLMEEL 195


>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  291 bits (746), Expect = 9e-77
 Identities = 133/194 (68%), Positives = 172/194 (88%)
 Frame = -1

Query: 606 MYGRRASQLLKDLSTNEPGQLSSFDTDAFDQVIKECDAHHIELQGMMRKIQEEGLDIQTT 427
           MYGRRASQLLK++ ++E GQL  F++D FDQVI+EC+ H+ + Q ++RK+ E+ LDI+TT
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMVEQNLDIETT 60

Query: 426 RNADHYGAVIHHLALIRNKRCLMAYVYNRAEVIQSLRWKVGAVLPQEVQQKVNYSEEEYF 247
           RN DHYGA IHHL+L+RNKRCLMAY+YNRAEVIQS RWK+G VLP ++Q+K+++SE+EYF
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHDIQEKLHFSEKEYF 120

Query: 246 KNHSAALESYMSEMEVDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 67
           KNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++S+HFL+R
Sbjct: 121 KNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSVSLTKNSLHFLRR 180

Query: 66  TDAELFISQGLMEE 25
           TDAE FISQGLMEE
Sbjct: 181 TDAEQFISQGLMEE 194


>ref|XP_003576019.1| PREDICTED: DNA replication complex GINS protein PSF1-like
           [Brachypodium distachyon]
          Length = 197

 Score =  289 bits (740), Expect = 4e-76
 Identities = 132/194 (68%), Positives = 171/194 (88%)
 Frame = -1

Query: 606 MYGRRASQLLKDLSTNEPGQLSSFDTDAFDQVIKECDAHHIELQGMMRKIQEEGLDIQTT 427
           MYGRRASQLLK+L + EPGQL  F++D FDQV++EC+ H+ + Q ++RK+ ++ LDI+TT
Sbjct: 1   MYGRRASQLLKELDSCEPGQLVVFNSDVFDQVVRECNEHNAQFQSLIRKMVDQNLDIETT 60

Query: 426 RNADHYGAVIHHLALIRNKRCLMAYVYNRAEVIQSLRWKVGAVLPQEVQQKVNYSEEEYF 247
           RN DHYGA IHHL+L+RNKRCL+AY+YNRAE IQS RWK+G VLP E+Q+K+++SE+EYF
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLIAYMYNRAETIQSFRWKLGPVLPHEIQEKLHFSEKEYF 120

Query: 246 KNHSAALESYMSEMEVDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 67
           KNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++S+HFL+R
Sbjct: 121 KNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSISLTKNSLHFLRR 180

Query: 66  TDAELFISQGLMEE 25
           TDAE FISQGLMEE
Sbjct: 181 TDAEQFISQGLMEE 194


>tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea mays]
          Length = 204

 Score =  285 bits (728), Expect = 1e-74
 Identities = 133/201 (66%), Positives = 172/201 (85%), Gaps = 7/201 (3%)
 Frame = -1

Query: 606 MYGRRASQLLKDLSTNEPGQLSSFDTDAFDQVIKECDAHHIELQGMMRKIQEEGLDIQTT 427
           MYGRRASQLLK++ ++E GQL  F++D FDQVI+EC+ H+ + Q ++RK+ E+ LDI+TT
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMVEQNLDIETT 60

Query: 426 RNADHYGAVIHHLALIRNKRCLMAYVY-------NRAEVIQSLRWKVGAVLPQEVQQKVN 268
           RN DHYGA IHHL+L+RNKRCLMAY+Y       NRAEVIQS RWK+G VLP ++Q+K++
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLMAYMYKTKSSQYNRAEVIQSFRWKIGPVLPHDIQEKLH 120

Query: 267 YSEEEYFKNHSAALESYMSEMEVDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARH 88
           +SE+EYFKNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++
Sbjct: 121 FSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSVSLTKN 180

Query: 87  SIHFLKRTDAELFISQGLMEE 25
           S+HFL+RTDAE FISQGLMEE
Sbjct: 181 SLHFLRRTDAEQFISQGLMEE 201


>ref|XP_004135842.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Cucumis sativus] gi|449491012|ref|XP_004158773.1|
           PREDICTED: probable DNA replication complex GINS protein
           PSF1-like [Cucumis sativus]
          Length = 200

 Score =  284 bits (726), Expect = 2e-74
 Identities = 134/198 (67%), Positives = 172/198 (86%), Gaps = 3/198 (1%)
 Frame = -1

Query: 606 MYGRRASQLLKDLSTNEPGQLSSFDTDAFDQVIKECDAHHIELQGMMRKIQEEGLDIQTT 427
           MYGR+A QL+K+L++ E GQL+ F++D F+QVI EC  HH+ELQ ++RK+QEEGLD+QTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 426 RNADHYGAVIHHLALIRNKRCLMAYVYNRAEVIQSLRWK-VGAVLPQEVQQKVNYSEEEY 250
           +N DH+GA+IHHLAL+RNKRCLMAYV+NRAE+I+SL WK VG+++P E+Q+K++ SEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 249 FKNHSAALESYMSEMEVDLTVDMVPPKDPYIKVRVLDDIGD--VFLSDQSPNLARHSIHF 76
           FK HSA L+ YMS++E+DLTVDMVPPKDPYI+VRVLDDIG+  V   D++ N A HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 75  LKRTDAELFISQGLMEEL 22
           LKRTDAE +IS+GLMEEL
Sbjct: 181 LKRTDAEQYISRGLMEEL 198