BLASTX nr result

ID: Coptis25_contig00000226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000226
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ91133.1| ampk protein [Platanus x acerifolia]                  101   7e-20
emb|CBI33521.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002275302.1| PREDICTED: uncharacterized protein LOC100255...    91   7e-17
gb|ABK94604.1| unknown [Populus trichocarpa]                           81   8e-14
emb|CAN81875.1| hypothetical protein VITISV_034527 [Vitis vinifera]    74   1e-11

>emb|CAJ91133.1| ampk protein [Platanus x acerifolia]
          Length = 205

 Score =  101 bits (251), Expect = 7e-20
 Identities = 65/146 (44%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
 Frame = +2

Query: 50  MECHMAGVMRCCLDKNCSWF---SPNIDMENIHRRRFKVGLCNTRRDYQKRTLL---SNG 211
           MEC M GV RCC  K+ SWF   S  +  ENI R    V LCN R   ++ T L   S G
Sbjct: 1   MECQMTGVARCCSAKHDSWFFWHSRKLGQENIQRPSCNVALCNLRMGSRRLTFLHHASIG 60

Query: 212 KYPTRQA----FALPIXXXXXXXXXXXXXXXXDGDEA----TSDDVLSQKLARDELKSLL 367
           K P + +    F++P+                + DE     +S + LSQ L  D LKSLL
Sbjct: 61  KSPMQHSSWRIFSMPVSVEKESSSLSPEGYTSNSDEVAEKDSSKEFLSQPLDGDGLKSLL 120

Query: 368 ADSQRSKLVNKLSEANQQNRFLKRQL 445
           ADS+R+KL+ KLSEANQ NRFLKRQL
Sbjct: 121 ADSERTKLIRKLSEANQHNRFLKRQL 146


>emb|CBI33521.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 58/146 (39%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
 Frame = +2

Query: 50  MECHMAGVMRCCLDKNCSWFS---PNIDMENIHRRRFKVGLCNTRRDYQKRTLLSN---G 211
           MECHM G+ R C +   SWFS    N+D E++   R  V   N R   QK  +      G
Sbjct: 56  MECHMIGISRGCPENQVSWFSWKSTNLDWEDVRGLRCNVTRWNLRVGSQKCAITCQAFVG 115

Query: 212 KYPTRQ----AFALPIXXXXXXXXXXXXXXXXDGDEATSD---DVLSQKLARDELKSLLA 370
           K    Q     +++PI                D + A+ D   ++L Q L  DELK+LL 
Sbjct: 116 KQSMHQKLWRTYSMPINLDKESSSPFSQDYSSDNENASEDSPEELLDQPLGSDELKTLLV 175

Query: 371 DSQRSKLVNKLSEANQQNRFLKRQLH 448
           DS+R+KL+ KLSEANQQNR LKRQL+
Sbjct: 176 DSERTKLIKKLSEANQQNRILKRQLY 201


>ref|XP_002275302.1| PREDICTED: uncharacterized protein LOC100255271 isoform 1 [Vitis
           vinifera]
          Length = 303

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 58/146 (39%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
 Frame = +2

Query: 50  MECHMAGVMRCCLDKNCSWFS---PNIDMENIHRRRFKVGLCNTRRDYQKRTLLSN---G 211
           MECHM G+ R C +   SWFS    N+D E++   R  V   N R   QK  +      G
Sbjct: 1   MECHMIGISRGCPENQVSWFSWKSTNLDWEDVRGLRCNVTRWNLRVGSQKCAITCQAFVG 60

Query: 212 KYPTRQ----AFALPIXXXXXXXXXXXXXXXXDGDEATSD---DVLSQKLARDELKSLLA 370
           K    Q     +++PI                D + A+ D   ++L Q L  DELK+LL 
Sbjct: 61  KQSMHQKLWRTYSMPINLDKESSSPFSQDYSSDNENASEDSPEELLDQPLGSDELKTLLV 120

Query: 371 DSQRSKLVNKLSEANQQNRFLKRQLH 448
           DS+R+KL+ KLSEANQQNR LKRQL+
Sbjct: 121 DSERTKLIKKLSEANQQNRILKRQLY 146


>gb|ABK94604.1| unknown [Populus trichocarpa]
          Length = 299

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
 Frame = +2

Query: 68  GVMRCCLDKNCSWFSPN---IDMENIHRRRFKVGLCNTRRDY----------QKRTLLSN 208
           G  RCC+ K   WFS N   +D+E+IH+  + V  C  +              ++  +SN
Sbjct: 4   GTTRCCIGKQVPWFSRNSRMLDVESIHKLPYHVFGCTIKPSNLRFAHSYWGSARKNWMSN 63

Query: 209 GKYPTRQAFALPIXXXXXXXXXXXXXXXXDGD--EATSDDVLSQKLARDELKSLLADSQR 382
             + T   + +P+                +G   E   ++ L Q L+ DELK+LL DSQR
Sbjct: 64  VLWRT---YTMPVSLEESSSEQPEDYSDDEGSSSEDLPEEPLDQSLSSDELKALLLDSQR 120

Query: 383 SKLVNKLSEANQQNRFLKRQLH 448
             L  KLSEANQQNRFLKRQLH
Sbjct: 121 KNLTKKLSEANQQNRFLKRQLH 142


>emb|CAN81875.1| hypothetical protein VITISV_034527 [Vitis vinifera]
          Length = 190

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
 Frame = +2

Query: 77  RCCLDKNCSWFS---PNIDMENIHRRRFKVGLCNTRRDYQKRTL----LSNGKYPTRQ-- 229
           R C +   SWFS    N+D E++   R  V   N R   QK  +    L  GK    Q  
Sbjct: 24  RGCPENQVSWFSWKSTNLDWEDVRGLRCNVTRWNLRVGSQKCAITCPKLLCGKQSMHQKL 83

Query: 230 --AFALPIXXXXXXXXXXXXXXXXDGDEATSD---DVLSQKLARDELKSLLADSQRSKLV 394
              +++PI                D + A+ D   ++L Q L  DELK+LL DS+R+KL+
Sbjct: 84  WRTYSMPINLDKESSSPFSQDYSSDNENASEDSPEELLDQPLGSDELKTLLVDSERTKLI 143

Query: 395 NKLSEANQQNRFLKRQ 442
            KLSEANQQNR LKRQ
Sbjct: 144 KKLSEANQQNRILKRQ 159


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