BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000206
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   432   e-119
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...   432   e-119
gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisu...   431   e-119
sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding prote...   431   e-119
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      430   e-118

>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  432 bits (1111), Expect = e-119
 Identities = 208/210 (99%), Positives = 210/210 (100%)
 Frame = -1

Query: 785 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 606
           KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP
Sbjct: 23  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 82

Query: 605 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 426
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 83  ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 142

Query: 425 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 246
           IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 143 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 202

Query: 245 KGPLENLADHLADPVNNNAWAYATNFVPGK 156
           KGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 203 KGPLENLADHLADPVNNNAWSYATNFVPGK 232


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score =  432 bits (1111), Expect = e-119
 Identities = 208/210 (99%), Positives = 210/210 (100%)
 Frame = -1

Query: 785 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 606
           KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP
Sbjct: 60  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 119

Query: 605 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 426
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 120 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 179

Query: 425 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 246
           IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 180 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 239

Query: 245 KGPLENLADHLADPVNNNAWAYATNFVPGK 156
           KGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 240 KGPLENLADHLADPVNNNAWSYATNFVPGK 269


>gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
          Length = 266

 Score =  431 bits (1108), Expect = e-119
 Identities = 207/210 (98%), Positives = 210/210 (100%)
 Frame = -1

Query: 785 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 606
           KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP
Sbjct: 57  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 116

Query: 605 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 426
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 117 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176

Query: 425 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 246
           IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 236

Query: 245 KGPLENLADHLADPVNNNAWAYATNFVPGK 156
           KGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 237 KGPLENLADHLSDPVNNNAWSYATNFVPGK 266


>sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
           AltName: Full=LHCII type I CAB-8; Flags: Precursor
           gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein
           [Pisum sativum]
          Length = 268

 Score =  431 bits (1108), Expect = e-119
 Identities = 207/210 (98%), Positives = 210/210 (100%)
 Frame = -1

Query: 785 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 606
           KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP
Sbjct: 59  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 118

Query: 605 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 426
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 119 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 178

Query: 425 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 246
           IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 179 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 238

Query: 245 KGPLENLADHLADPVNNNAWAYATNFVPGK 156
           KGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 239 KGPLENLADHLSDPVNNNAWSYATNFVPGK 268


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  430 bits (1106), Expect = e-118
 Identities = 207/210 (98%), Positives = 209/210 (99%)
 Frame = -1

Query: 785 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 606
           KYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFP
Sbjct: 57  KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 116

Query: 605 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 426
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 117 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176

Query: 425 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 246
           IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 236

Query: 245 KGPLENLADHLADPVNNNAWAYATNFVPGK 156
           KGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 KGPLENLADHLADPVNNNAWAYATNFVPGK 266