BLASTX nr result

ID: Coptis25_contig00000175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000175
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...   136   2e-30
ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v...   134   1e-29
gb|ABM05488.1| Impa2 [Nicotiana benthamiana]                          133   2e-29
ref|XP_003550530.1| PREDICTED: importin subunit alpha-1-like [Gl...   132   4e-29
ref|XP_003536050.1| PREDICTED: importin subunit alpha-1-like [Gl...   131   5e-29

>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = -3

Query: 258 EDNMVEIRKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDN 79
           EDNMVEIRK+KREESLQKKRREG+ +   QQFPS++H S +EKKLESLPSMVAGVW D++
Sbjct: 30  EDNMVEIRKSKREESLQKKRREGLQA---QQFPSAVHTSTVEKKLESLPSMVAGVWSDNS 86

Query: 78  ALQLESTTQFRKLLSIERSPPIEEVI 1
           +LQLE+TTQFRKLLSIERSPPIEEVI
Sbjct: 87  SLQLEATTQFRKLLSIERSPPIEEVI 112


>ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296083287|emb|CBI22923.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/86 (79%), Positives = 78/86 (90%)
 Frame = -3

Query: 258 EDNMVEIRKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDN 79
           EDNMVEIRK+KREESLQKKRREG+ +   QQFP++ H S +EKKLESLPSMVAGVW D++
Sbjct: 30  EDNMVEIRKSKREESLQKKRREGLQA---QQFPAAAHASTVEKKLESLPSMVAGVWSDNS 86

Query: 78  ALQLESTTQFRKLLSIERSPPIEEVI 1
           +LQLE+TTQFRKLLSIERSPPIEEVI
Sbjct: 87  SLQLEATTQFRKLLSIERSPPIEEVI 112


>gb|ABM05488.1| Impa2 [Nicotiana benthamiana]
          Length = 529

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = -3

Query: 258 EDNMVEIRKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDN 79
           EDNMVEIRK+KREESL KKRREG+    QQ FP+++H S +EKKLESLPSMVAGVW +DN
Sbjct: 30  EDNMVEIRKSKREESLLKKRREGL-QPQQQPFPANLHTSTVEKKLESLPSMVAGVWSNDN 88

Query: 78  ALQLESTTQFRKLLSIERSPPIEEVI 1
            LQLE+TTQFRKLLSIERSPPIEEVI
Sbjct: 89  NLQLEATTQFRKLLSIERSPPIEEVI 114


>ref|XP_003550530.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 530

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/86 (76%), Positives = 77/86 (89%)
 Frame = -3

Query: 258 EDNMVEIRKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDN 79
           EDNMVEIRK+KREESL KKRREG+ +  QQQFP+ +  S ++KKLESLP+MVAGVW DDN
Sbjct: 30  EDNMVEIRKSKREESLLKKRREGLQA--QQQFPAPLQNSTVDKKLESLPAMVAGVWSDDN 87

Query: 78  ALQLESTTQFRKLLSIERSPPIEEVI 1
           ++QLE+TTQFRKLLSIERSPPIEEVI
Sbjct: 88  SIQLEATTQFRKLLSIERSPPIEEVI 113


>ref|XP_003536050.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/86 (77%), Positives = 73/86 (84%)
 Frame = -3

Query: 258 EDNMVEIRKNKREESLQKKRREGMTSANQQQFPSSIHQSQIEKKLESLPSMVAGVWMDDN 79
           ED MVEIRKN+REESLQKKRREG+     QQ P+S+H S +EKKLE LPSMV GVW DDN
Sbjct: 32  EDTMVEIRKNRREESLQKKRREGL---QPQQMPASVHSSLVEKKLEHLPSMVTGVWTDDN 88

Query: 78  ALQLESTTQFRKLLSIERSPPIEEVI 1
            LQLE+TTQFRKLLSIERSPPIEEVI
Sbjct: 89  NLQLEATTQFRKLLSIERSPPIEEVI 114


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