BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000173
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   337   4e-90
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   337   4e-90
gb|ADW83731.1| ribosomal protein L4 [Musa acuminata AAA Group]        330   6e-88
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   329   8e-88
dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pra...   328   2e-87

>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  337 bits (864), Expect = 4e-90
 Identities = 175/253 (69%), Positives = 192/253 (75%)
 Frame = -3

Query: 1223 EIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPL 1044
            E+PLV+GDSAE VEKTS+AI +LKQ+GAY DAEKAKDS  IRPGKGKMRNRRY+S+KGPL
Sbjct: 154  ELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPL 213

Query: 1043 IVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSF 864
            IVYGTEG+K+VKAFRNIPGVEVANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF
Sbjct: 214  IVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSF 273

Query: 863  DKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXX 684
            +K SEKK GY+LPRSKMVNADL+RIINSDEVQSVVRPI  EVKRAPM             
Sbjct: 274  EKTSEKKNGYLLPRSKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLK 333

Query: 683  XXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKVIPXXXXXXXXXXXXAWYKTMISDSDYS 504
              PYAKT                        K IP            AWY+TMISDSDY+
Sbjct: 334  LNPYAKTARRMALLAEAQRVKAKQEKLDKKRKQIPKEEVAAIKAAGKAWYQTMISDSDYT 393

Query: 503  EFDNFSKWLGISQ 465
            EFDNFSKWLG+SQ
Sbjct: 394  EFDNFSKWLGVSQ 406


>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  337 bits (864), Expect = 4e-90
 Identities = 175/253 (69%), Positives = 191/253 (75%)
 Frame = -3

Query: 1223 EIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPL 1044
            E+PLV+GDSAE VEKTS+AI +LKQ+GAY DAEKAKDS  IRPGKGKMRNRRY+S+KGPL
Sbjct: 153  ELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKAKDSHGIRPGKGKMRNRRYISRKGPL 212

Query: 1043 IVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSF 864
            IVYGTEG+K+VKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSF
Sbjct: 213  IVYGTEGAKLVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSF 272

Query: 863  DKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXX 684
            DK SEKKKGY+LPR+KMVNADL+RIINSDEVQSVVRPI  EVKRAPM             
Sbjct: 273  DKTSEKKKGYLLPRAKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLK 332

Query: 683  XXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKVIPXXXXXXXXXXXXAWYKTMISDSDYS 504
              PYAKT                          IP            AWY+TMISDSDY+
Sbjct: 333  LNPYAKTARRMALLAEAQRVKAKKEKLDKKRAQIPKEEAAAIKAAGKAWYQTMISDSDYT 392

Query: 503  EFDNFSKWLGISQ 465
            EFDNFSKWLG+SQ
Sbjct: 393  EFDNFSKWLGVSQ 405


>gb|ADW83731.1| ribosomal protein L4 [Musa acuminata AAA Group]
          Length = 301

 Score =  330 bits (845), Expect = 6e-88
 Identities = 173/253 (68%), Positives = 189/253 (74%)
 Frame = -3

Query: 1223 EIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPL 1044
            E+PLVV DSAEGVEKT+SAIK+LKQIGA  DAEKAKDS+ IRPGKGKMRNRRY+S+KGPL
Sbjct: 49   ELPLVVSDSAEGVEKTASAIKILKQIGALPDAEKAKDSQGIRPGKGKMRNRRYISRKGPL 108

Query: 1043 IVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSF 864
            IVYGTEGSKIVKAFRNIPGV+VANVERLNLLKLA GGH+GRFIIWTKSAFEKLDS++G+F
Sbjct: 109  IVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLASGGHIGRFIIWTKSAFEKLDSVFGTF 168

Query: 863  DKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXX 684
            DK SEKKKGYVLPR KMVNADLSRIINSDEVQSVVRPI  EVKR  +             
Sbjct: 169  DKPSEKKKGYVLPRPKMVNADLSRIINSDEVQSVVRPIKKEVKRRTLKKNPLKNLYTLLK 228

Query: 683  XXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKVIPXXXXXXXXXXXXAWYKTMISDSDYS 504
              PYAKT                          +P            AWYKTMISDSDY+
Sbjct: 229  LNPYAKTARRMALLAEAQRVKAKKEKLDKKSTQLPKEEAAAVKAAGRAWYKTMISDSDYA 288

Query: 503  EFDNFSKWLGISQ 465
            EFDNFSKWLG++Q
Sbjct: 289  EFDNFSKWLGVTQ 301


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  329 bits (844), Expect = 8e-88
 Identities = 171/253 (67%), Positives = 188/253 (74%)
 Frame = -3

Query: 1223 EIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPL 1044
            E+PLVV DSAEGVEKT  AIKVLKQIGA+ DAEKAKDS  IRPGKGKMRNRRY+S++GPL
Sbjct: 153  ELPLVVSDSAEGVEKTKEAIKVLKQIGAFPDAEKAKDSRSIRPGKGKMRNRRYISRRGPL 212

Query: 1043 IVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSF 864
            +VYGTEG+K VKAFRN+PGVEVANVERLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF
Sbjct: 213  VVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSF 272

Query: 863  DKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXX 684
            DK SEKKKGY+LPRSKMVN+DLSRIINSDEVQSVVRPI  +VKRA +             
Sbjct: 273  DKPSEKKKGYLLPRSKMVNSDLSRIINSDEVQSVVRPIKKDVKRATLKKNPLKNLNSMLK 332

Query: 683  XXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKVIPXXXXXXXXXXXXAWYKTMISDSDYS 504
              PYAKT                        K +             AWY TM+SDSDY+
Sbjct: 333  LNPYAKTAKRMALLAEAQRVKVKKEKLDKKRKTVSKEEASAIKAAGKAWYHTMVSDSDYT 392

Query: 503  EFDNFSKWLGISQ 465
            EFDNFSKWLG+SQ
Sbjct: 393  EFDNFSKWLGVSQ 405


>dbj|BAE71215.1| putative 60S ribosomal protein L1 [Trifolium pratense]
            gi|84468330|dbj|BAE71248.1| putative 60S ribosomal
            protein L1 [Trifolium pratense]
          Length = 406

 Score =  328 bits (841), Expect = 2e-87
 Identities = 170/253 (67%), Positives = 188/253 (74%)
 Frame = -3

Query: 1223 EIPLVVGDSAEGVEKTSSAIKVLKQIGAYADAEKAKDSEKIRPGKGKMRNRRYVSKKGPL 1044
            E PLVVGDSAEGVEKT  AIKVLK+IGA+ DAEKAKDS  IRPGKGKMRNRRY+S+KGPL
Sbjct: 154  EFPLVVGDSAEGVEKTKEAIKVLKKIGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPL 213

Query: 1043 IVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSF 864
            IVYGT+G+K VKAFRNIPGVE+ANVERLNLLKLAPGGHLGRF++WTKSAFEKLDSIYGSF
Sbjct: 214  IVYGTDGAKAVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSF 273

Query: 863  DKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVVRPINNEVKRAPMXXXXXXXXXXXXX 684
            DK SEKKKGYVLPR+KMVN+DL+RIINSDEVQSVVRP+  +VKRA +             
Sbjct: 274  DKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPVKKDVKRATLKKNPLKNLNVMLR 333

Query: 683  XXPYAKTXXXXXXXXXXXXXXXXXXXXXXXXKVIPXXXXXXXXXXXXAWYKTMISDSDYS 504
              PYAKT                        K +             AWY TMISDSDY+
Sbjct: 334  LNPYAKTAKRMALLAEAERVKAKKEKLDKKRKTVTKEEASAIKAAGKAWYNTMISDSDYA 393

Query: 503  EFDNFSKWLGISQ 465
            EFDNFSKWLG+SQ
Sbjct: 394  EFDNFSKWLGVSQ 406