BLASTX nr result

ID: Coptis25_contig00000160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000160
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trich...    82   3e-14
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...    82   4e-14
emb|CBI28588.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002271553.1| PREDICTED: putative disease resistance RPP13...    77   2e-12
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    77   2e-12

>ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832589|gb|EEE71066.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 851

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
 Frame = -1

Query: 336 KEKLRSLVLSFYEEEQDAERKRI-----ESVLDGLQPHTNLAELDIEGYEGNKFPSWMSS 172
           K  L SL LS++      +RK +     E VL+GLQPH+NL +L I GY G++FP+WM +
Sbjct: 656 KTALLSLTLSWHGNGAPQQRKSVIQENNEEVLEGLQPHSNLKKLKIWGYGGSRFPNWMMN 715

Query: 171 -NTALPNLVKLELSRCNQSSELPALGRXXXXXXXXXXXLGSVKRIGCEFYGLG 16
            N  LPNLV++ELS C+   +LP LG+           +  VK I    YG G
Sbjct: 716 LNMTLPNLVEMELSACDHCEQLPPLGKLQFLKNLKLQGMDGVKSIDSNVYGDG 768


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223544113|gb|EEF45638.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1104

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 46/109 (42%), Positives = 63/109 (57%)
 Frame = -1

Query: 336  KEKLRSLVLSFYEEEQDAERKRIESVLDGLQPHTNLAELDIEGYEGNKFPSWMSSNTALP 157
            KE L+SL L +  E +D+     E VLDG QPH+NL +L I  Y+G+KF SWM ++ +LP
Sbjct: 712  KEDLKSLSLCWSREGEDSSNLS-EEVLDGCQPHSNLKKLSIRKYQGSKFASWM-TDLSLP 769

Query: 156  NLVKLELSRCNQSSELPALGRXXXXXXXXXXXLGSVKRIGCEFYGLGST 10
            NLV++EL  C++   LP  G            +  VK IG E YG G +
Sbjct: 770  NLVEIELVDCDRCEHLPPFGELKFLEILVLRKINGVKCIGSEIYGNGKS 818


>emb|CBI28588.3| unnamed protein product [Vitis vinifera]
          Length = 1092

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = -1

Query: 333 EKLRSLVLSFYEEEQDAERKRIE-SVLDGLQPHTNLAELDIEGYEGNKFPSWMSSNTALP 157
           E L  L++ +  +  D+  +R E  VLD L+PHTNL +L +  Y G+KFPSW+ S ++  
Sbjct: 673 EGLEELLMEWVSDFSDSRNERDEVHVLDLLEPHTNLKKLMVSFYGGSKFPSWIGS-SSFS 731

Query: 156 NLVKLELSRCNQSSELPALGRXXXXXXXXXXXLGSVKRIGCEFYG 22
           N+V L L+ C   + L +LGR           +G +KR+G EFYG
Sbjct: 732 NMVDLNLNHCKNCTSLSSLGRLSSLKSLCIAGMGGLKRVGAEFYG 776


>ref|XP_002271553.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1247

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = -1

Query: 333 EKLRSLVLSFYEEEQDAERKRIE-SVLDGLQPHTNLAELDIEGYEGNKFPSWMSSNTALP 157
           E L  L++ +  +  D+  +R E  VLD L+PHTNL +L +  Y G+KFPSW+ S ++  
Sbjct: 626 EGLEELLMEWVSDFSDSRNERDEVHVLDLLEPHTNLKKLMVSFYGGSKFPSWIGS-SSFS 684

Query: 156 NLVKLELSRCNQSSELPALGRXXXXXXXXXXXLGSVKRIGCEFYG 22
           N+V L L+ C   + L +LGR           +G +KR+G EFYG
Sbjct: 685 NMVDLNLNHCKNCTSLSSLGRLSSLKSLCIAGMGGLKRVGAEFYG 729


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
 Frame = -1

Query: 336  KEKLRSLVLSFY-EEEQDAERKRIESVLDGLQPHTNLAELDIEGYEGNKFPSWMSS-NTA 163
            K  L SL LS+     +   ++  E VL+GLQPH+NL +L I GY G++FP+WM + N  
Sbjct: 713  KTALLSLTLSWNGNRTKSVIQENSEEVLEGLQPHSNLKKLMIWGYGGSRFPNWMMNLNMT 772

Query: 162  LPNLVKLELSRCNQSSELPALGRXXXXXXXXXXXLGSVKRIGCEFYGLG 16
            LPNLV++ELS C    +LP LG+           +  VK I    YG G
Sbjct: 773  LPNLVEMELSACPNCEQLPPLGKLQLLKNLVLRGMDGVKSIDTNVYGDG 821


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