BLASTX nr result

ID: Coptis25_contig00000147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000147
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281188.1| PREDICTED: uncharacterized protein LOC100242...   332   1e-88
ref|XP_002283631.1| PREDICTED: uncharacterized protein LOC100250...   292   2e-76
gb|AFK39739.1| unknown [Medicago truncatula]                          290   6e-76
ref|XP_003523771.1| PREDICTED: uncharacterized protein LOC100793...   288   4e-75
ref|XP_002510437.1| ubiquitin-protein ligase, putative [Ricinus ...   287   6e-75

>ref|XP_002281188.1| PREDICTED: uncharacterized protein LOC100242078 [Vitis vinifera]
          Length = 443

 Score =  332 bits (852), Expect = 1e-88
 Identities = 210/451 (46%), Positives = 264/451 (58%), Gaps = 11/451 (2%)
 Frame = +2

Query: 113  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 283
            MGS CCV A++R  LP+R + E+L RNV +SP+W+  WDN+GRVA EV++ +   +H   
Sbjct: 1    MGSVCCVPAKER-ALPNRATGESLHRNVIYSPSWSFHWDNRGRVAGEVDNTSYGAAHAVS 59

Query: 284  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMASGTDTCMRSSSL 457
              V  E K  L  E G+ S+  S   +  T    KS     T  + M   +D  M S+  
Sbjct: 60   RNVSLEMKGRLGHERGNFSDGGSLLDNFGTPTSQKSPVHEGTVANLMTP-SDLSMESNHY 118

Query: 458  SEVKDLKESAAVADSSALILPVSIPVASTSSLPIGDS-SSRCRPLPAEFTPSWKARHSPG 634
            +EVK+L ES+ +AD SA  L  SIP  S+ S P  D  SS+  P+PA  TPS +AR SPG
Sbjct: 119  TEVKNLTESSEIADLSAPKLSFSIPSTSSFSTPTEDPLSSQTHPIPANSTPSRRARCSPG 178

Query: 635  YSFNLQRQVSDGQSSVFKSPNN-SISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFS 805
            +   L RQVSD +    KSPNN S+S+ R S  +STCSNDLT               TFS
Sbjct: 179  HQ--LLRQVSDSRILGLKSPNNNSMSDRRPSFVLSTCSNDLT-NGSQGGSSDGWSMRTFS 235

Query: 806  ELVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLRTCGVCLKLLMERSPWVAQK 985
            ELVASSQRERWSFDSE   S RGK++ S+S    S S DL+ CG C KLL ERS + +QK
Sbjct: 236  ELVASSQRERWSFDSEHFGSGRGKISGSSSRFSCSPSIDLQNCGACSKLLTERSSFSSQK 295

Query: 986  XXXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKG-KTVKIDI 1162
                          CGHVYHAECLE  T E +RFDP CPVC  G+KQ  K   K ++++ 
Sbjct: 296  IVPNNELSVVAVLVCGHVYHAECLETMTLEADRFDPACPVCMVGEKQVSKMSRKALRVEA 355

Query: 1163 DSKAR-NRISRNRVVDSNIHFDYTVPDHWISTRREXXXXXXXXXXXXXXXFAKPFLRRHF 1339
            + KAR N+ISRNRVVDS +   + V D    T +E               FAKPFLRRHF
Sbjct: 356  ELKARNNKISRNRVVDSYLDGGFDVCDRRKHTEQERKFPKMESSSSVRSSFAKPFLRRHF 415

Query: 1340 SLGSKSAKSILDNEFTIKSPSRKGFWARYRK 1432
            SLGSK ++S+ D++ T K    KGFWARYRK
Sbjct: 416  SLGSKWSRSLSDSDSTRK----KGFWARYRK 442


>ref|XP_002283631.1| PREDICTED: uncharacterized protein LOC100250419 [Vitis vinifera]
          Length = 455

 Score =  292 bits (747), Expect = 2e-76
 Identities = 192/461 (41%), Positives = 249/461 (54%), Gaps = 24/461 (5%)
 Frame = +2

Query: 113  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITS-----AD 277
            MGSACCVAARDR +    +      RNVR+SP+W+ RWDN+GRVA EV+   S      +
Sbjct: 1    MGSACCVAARDRTITNGPSCEVMQHRNVRYSPSWSFRWDNRGRVAGEVDTSASWFADGLN 60

Query: 278  SHVGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMASGTDTCMRSSSL 457
             + G E+K     E    S+  S   +  T    KS     T G+     +D  +  +  
Sbjct: 61   RNGGLENKS----ETTYASDGGSPLENFQTLTWQKSPVSEGTAGNLTTPASDQSISRNIS 116

Query: 458  SEV----------KDLKESAAVADSSALILPVSIP-----VASTSSLPIGDSSSRCRPLP 592
             EV          K+   S  V+D S   L  ++P     + S SSL     SS+   LP
Sbjct: 117  VEVSVEHLELVIVKESTGSPGVSDPSPAKLSPALPSPSPTLPSPSSLSTSPVSSQSHILP 176

Query: 593  AEFTPSWKARHSPGYSFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXX 766
            A  TPS  +R SPG+  +L RQVSD +    KSPN SISE R    +   +ND ++    
Sbjct: 177  ATSTPSRWSRGSPGH--HLLRQVSDSRIPGLKSPNYSISEERPPFVLPVWNND-SIRGSY 233

Query: 767  XXXXXXXXXXTFSELVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLRTCGVCL 946
                       FSEL+A+S+RERWSFDSE+L  +R K+TRS+S + AS S DL+TCGVC 
Sbjct: 234  GGSSDGWSMHAFSELMATSRRERWSFDSESLGFNRDKITRSSSRISASPSIDLQTCGVCA 293

Query: 947  KLLMERSPWVAQKXXXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQ 1126
            KLL ERS W  QK              CGHVYHAECLEN T+E N++DP CPVCT G+KQ
Sbjct: 294  KLLTERSSWGGQKIIASNELSVVAVLICGHVYHAECLENMTAEINKYDPACPVCTFGEKQ 353

Query: 1127 ALK-KGKTVKIDIDSKARNRISRNRVVDSNIHFDYTVPDHWISTRREXXXXXXXXXXXXX 1303
             LK   K +K ++D KA+N+ SRNRVVDS++  +  V DH  S+ RE             
Sbjct: 354  TLKLSEKALKAEMDLKAKNKRSRNRVVDSDLDGETVVFDHRKSSGREGKGPKLGSSSSMK 413

Query: 1304 XXFAKPFLRRHFSLGSKSAKSILDNEFTIKSPSRKG-FWAR 1423
                KPFLRRHFS GSK  KS  ++    +S  +KG FWA+
Sbjct: 414  SSLGKPFLRRHFSFGSKGTKSFSESH---QSTRKKGFFWAK 451


>gb|AFK39739.1| unknown [Medicago truncatula]
          Length = 433

 Score =  290 bits (743), Expect = 6e-76
 Identities = 187/449 (41%), Positives = 256/449 (57%), Gaps = 9/449 (2%)
 Frame = +2

Query: 113  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 283
            MGS CCVAA+D+ L P+RT SE+  RN    P+ + +WD  GRVA E++D++   S    
Sbjct: 1    MGSVCCVAAKDQTL-PNRTGSESFHRNPVCLPSLSFQWDRWGRVASEIDDLSFRASRRVS 59

Query: 284  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMASGTDTCMRSSSL 457
              V  E K SL  + G+LS+  S   +  T M  KS    Q G + M   +D  M S+  
Sbjct: 60   RSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCS 119

Query: 458  SEVKDLKESAAVADSSALILPVSIPVASTSSLPIGDSSSRCRPLPAEFTPSWKARHSPGY 637
            +  K+L ES  +A+SS   + +S+P  S+ S P   + +R   LP+  TPS  A  SPG+
Sbjct: 120  TVAKNLTESPEIAESSIPNISLSMP--SSFSTPTTRNLNR-HNLPSP-TPSRWAHRSPGH 175

Query: 638  SFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTFSEL 811
               L RQ+SD +    KSP+NSISEGR S  +STCSND+ +              TFSEL
Sbjct: 176  P--LLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDM-IAGSQCGSSDGWSMRTFSEL 232

Query: 812  VASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLRTCGVCLKLLMERSPWVAQKXX 991
            VASSQ+ERWSFDSE   S R K++ ++S    S + DL++CG C KLL ER+ W +QK  
Sbjct: 233  VASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFI 292

Query: 992  XXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQ-ALKKGKTVKIDIDS 1168
                        CGH YHAECLE  TSE + +DP CP+C  G+K  ++   K+++ + + 
Sbjct: 293  SNNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEM 352

Query: 1169 KARN-RISRNRVVDSNIHFDYTVPDHWISTRREXXXXXXXXXXXXXXXFAKPFLRRHFSL 1345
            KA+N +ISRNRVVDS  +FD  +  +    R++                 KPFL+RHFSL
Sbjct: 353  KAKNYKISRNRVVDS--YFDGGLDGY---DRQKSAASKLEASSSSRSSLRKPFLKRHFSL 407

Query: 1346 GSKSAKSILDNEFTIKSPSRKGFWARYRK 1432
            GSK  +S+ DN+    S  +KGFWARYRK
Sbjct: 408  GSKWNRSLSDND----SARKKGFWARYRK 432


>ref|XP_003523771.1| PREDICTED: uncharacterized protein LOC100793040 [Glycine max]
          Length = 437

 Score =  288 bits (736), Expect = 4e-75
 Identities = 193/452 (42%), Positives = 251/452 (55%), Gaps = 12/452 (2%)
 Frame = +2

Query: 113  MGSACCVAARDRNL-LPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADS--- 280
            MGSACCVAA+D  +   SRT  E+L+RN   SP+W+ RWD+ GRVA E+ED +   S   
Sbjct: 1    MGSACCVAAKDHTIPSTSRTGGESLNRNAVCSPSWSFRWDSWGRVAGEIEDPSFHTSRRV 60

Query: 281  --HVGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMASGTDTCMRSSS 454
              +V  E K SL  E G+LS+  S   +  T +  KS  R     S M   +D  M S+ 
Sbjct: 61   SRNVSMELKGSLSSERGNLSDWGSTLDNSVTPLSLKSPVREHLVTSQMTPSSDLSMSSNC 120

Query: 455  LSEVKDLKESAAVADSSALILPVSIPVASTSSLPIGD--SSSRCRPLPAEFTPSWKARHS 628
             + VK+L ES  +A+SS  I   S+P  S  S+P  D  ++     LP   TPS  A  S
Sbjct: 121  SAVVKNLIESPEIAESS--IPNRSVP--SVFSIPTTDPMTNHNYHNLPNS-TPSRWAHCS 175

Query: 629  PGYSFNLQRQVSDGQSSVFKSPNNSISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXXTF 802
            PG+   L  Q+SD +    KSP+NSISEGR S  +S CSND+                TF
Sbjct: 176  PGHP--LLTQISDSRILGLKSPDNSISEGRPSFVLSNCSNDMATGSQCGSSDGWSMR-TF 232

Query: 803  SELVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLRTCGVCLKLLMERSPWVAQ 982
            SE+VA SQ+ERWSFDSE   S R K++ ++S    S S DL++CG C KLL ERS W +Q
Sbjct: 233  SEMVAPSQKERWSFDSEYSGSGRHKISGTSSRFSYSPSMDLQSCGACSKLLTERSAWGSQ 292

Query: 983  KXXXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKGKT-VKID 1159
            K              CGHVYHAECLE  T E + +DP CP+C  G+K   K  K   + +
Sbjct: 293  KFIASSDLSVVAVLVCGHVYHAECLETITPEADSYDPACPICMVGEKHMSKLSKKGFRTE 352

Query: 1160 IDSKARN-RISRNRVVDSNIHFDYTVPDHWISTRREXXXXXXXXXXXXXXXFAKPFLRRH 1336
             ++KA+N +ISRNRVVDS +     V D      ++               F KPFLRRH
Sbjct: 353  SETKAKNYKISRNRVVDSYVDGGIDVFDR----LKDIVSKMEPSSSSTTSSFGKPFLRRH 408

Query: 1337 FSLGSKSAKSILDNEFTIKSPSRKGFWARYRK 1432
            FSLGSK ++S+L+N+    S  +KGFWARYRK
Sbjct: 409  FSLGSKWSRSLLEND----SARKKGFWARYRK 436


>ref|XP_002510437.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551138|gb|EEF52624.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 439

 Score =  287 bits (734), Expect = 6e-75
 Identities = 186/454 (40%), Positives = 246/454 (54%), Gaps = 14/454 (3%)
 Frame = +2

Query: 113  MGSACCVAARDRNLLPSRTSSEALSRNVRFSPTWNCRWDNQGRVADEVEDITSADSH--- 283
            MG+ACC+AAR+++L P+RT    L RN R SPTW+ RW+N+ RVA E+ED     SH   
Sbjct: 1    MGAACCIAARNKDL-PNRTGGNTLHRNARCSPTWSFRWENRRRVAGEIEDSLYQTSHGLS 59

Query: 284  --VGFESKDSLEVEFGDLSETRSEFMDIHTEMLHKSSSRRQTGGSSMASGTDTCMRSSSL 457
              V  E K  L  + G+LS+  S      T +  KS    + G + +A  +   + S+  
Sbjct: 60   RDVSVEVKGPLSSDRGNLSDEGSLHESFGTPISLKSPLHERIGANLIAQPSGLSLESNYP 119

Query: 458  SEVKDLKESAAVADSSALILPVSI----PVASTSSLPIGDSSSRCRPLPAEFTPSWKARH 625
            +  K+  ES  + + SA  LP S+       S   LP G       PLP   TPS +A  
Sbjct: 120  ALGKNSAESPDIVELSAPKLPYSVHSSFSTPSADPLPTGG-----HPLPPNSTPSRRACR 174

Query: 626  SPGYSFNLQRQVSDGQSSVFKSPNN-SISEGRQS--ISTCSNDLTVXXXXXXXXXXXXXX 796
            SPG+   L RQ+SD +    KSPNN S+SEGR S  +STCS DLT+              
Sbjct: 175  SPGH--RLLRQISDSRILGLKSPNNYSLSEGRSSFVLSTCSQDLTMGSHGGSSDGWSMR- 231

Query: 797  TFSELVASSQRERWSFDSETLDSSRGKVTRSNSNVLASHSTDLRTCGVCLKLLMERSPWV 976
            TFSELVASSQRERWSFDSE      GK +  +S    S S DL+TCG C K L E+S W 
Sbjct: 232  TFSELVASSQRERWSFDSEHFGYGFGKASGCSSRFSCSPSLDLQTCGACSKFLTEKSSWS 291

Query: 977  AQKXXXXXXXXXXXXXXCGHVYHAECLENTTSETNRFDPPCPVCTTGDKQALKKG-KTVK 1153
            +Q+              CGHVYHAECLE  T E +++DP CP+C  G+KQ  K   K +K
Sbjct: 292  SQRILSNNELSVVSVLVCGHVYHAECLETMTLEVDKYDPACPICMGGEKQVSKMSKKALK 351

Query: 1154 IDIDSKAR-NRISRNRVVDSNIHFDYTVPDHWISTRREXXXXXXXXXXXXXXXFAKPFLR 1330
             + + KAR ++ISRNRVVDS +  D    D+    ++                 +KPFLR
Sbjct: 352  AEAELKARSHKISRNRVVDSYLDSDSEDFDY---EKKATQVAPKVEPSSGAASSSKPFLR 408

Query: 1331 RHFSLGSKSAKSILDNEFTIKSPSRKGFWARYRK 1432
            RHF  GSK ++S+ +N+    S  ++GFWARYRK
Sbjct: 409  RHFPFGSKWSRSLSEND----SARKRGFWARYRK 438


Top