BLASTX nr result

ID: Coptis25_contig00000130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000130
         (1847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263081.1| PREDICTED: glutamate decarboxylase-like [Vit...   828   0.0  
ref|XP_002318327.1| predicted protein [Populus trichocarpa] gi|2...   814   0.0  
gb|AFK34235.1| unknown [Medicago truncatula]                          805   0.0  
emb|CBI38262.3| unnamed protein product [Vitis vinifera]              805   0.0  
ref|XP_003548319.1| PREDICTED: glutamate decarboxylase-like [Gly...   804   0.0  

>ref|XP_002263081.1| PREDICTED: glutamate decarboxylase-like [Vitis vinifera]
          Length = 505

 Score =  828 bits (2139), Expect = 0.0
 Identities = 401/505 (79%), Positives = 458/505 (90%), Gaps = 3/505 (0%)
 Frame = -1

Query: 1784 MVLSTTASESTS-LHCTFASRYVLESLPRYKMPENSIPKEAAYQIISDELMLDGNPRLNL 1608
            MV+STT S+S+  LH TFASRYV + LP++KMPE SIPKEAA+QIISDELMLDGNPRLNL
Sbjct: 1    MVISTTISDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLNL 60

Query: 1607 ASFVTTWMEPECEKLMLASINKNYVDMDEYPVTTEFQNRCVNMIAHLFNAPVGKDETALG 1428
            ASFVTTWME EC+KL++AS+NKNYVDMDEYPVTTE QNRCVNMIAHLFNAPVG++ETA+G
Sbjct: 61   ASFVTTWMEEECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPVGENETAIG 120

Query: 1427 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVDLKV 1248
            VGTVGSSEAIMLAGLAFKRKWQ KRK+EGKP DKPNIVTGANVQVCWEKFARYFEV+LK 
Sbjct: 121  VGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 1247 VKLREGYYIMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVRKNKETGWDTP 1068
            VKLREGYY+MDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLN+LL +KN ETGW TP
Sbjct: 181  VKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGTP 240

Query: 1067 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKGDLPEDL 888
            IHVDAASGGFIAPFL+PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK DLPE+L
Sbjct: 241  IHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEEL 300

Query: 887  IFHINYLGADQPTFTLNFSKGSNQIIAQYYQFLRLGFEGYKSIMENCMENAKVLKQGLEK 708
            IFHINYLG+DQPTFTLNFSKGS+QIIAQYYQF+RLGFEGYK+IM NCM+NA VLKQGL +
Sbjct: 301  IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLVE 360

Query: 707  MGRFTIVSKDIGVPLVAFTLKDSSQHTVFEIADNLRKFGWIVPAYTMPADAEHIAVLRVV 528
             GRF IVSKDIGVPLVAF+LKD+S +TVF+I++NLR++GWI+PAYTMP DAEHIAVLRVV
Sbjct: 361  TGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRVV 420

Query: 527  IREDFSCSLAERLLADIEKVLKDVDKYPSMISTRAANITSVVDERNGTHADG--RVVTKT 354
            +REDFS SLAERLL+DIEKV++++D   S  +TRA ++ + VDE      +G  ++  KT
Sbjct: 421  VREDFSRSLAERLLSDIEKVMREMDAVQSRATTRATHVIATVDETREGEGEGSEKLNKKT 480

Query: 353  LRNNTEEVANYWKKLVEQKKSTGAC 279
            +  N EE+A YWK++V++KK++G C
Sbjct: 481  VMENREEIAMYWKRVVDRKKTSGVC 505


>ref|XP_002318327.1| predicted protein [Populus trichocarpa] gi|222859000|gb|EEE96547.1|
            predicted protein [Populus trichocarpa]
          Length = 501

 Score =  814 bits (2102), Expect = 0.0
 Identities = 397/503 (78%), Positives = 454/503 (90%), Gaps = 1/503 (0%)
 Frame = -1

Query: 1784 MVLSTTASEST-SLHCTFASRYVLESLPRYKMPENSIPKEAAYQIISDELMLDGNPRLNL 1608
            MV+ST A++S  +L+ TFASRYV  +LPR+KMPENS+PK+AAYQ+I+DELMLDGNPRLNL
Sbjct: 1    MVISTAATDSDENLYSTFASRYVRTALPRFKMPENSMPKDAAYQVINDELMLDGNPRLNL 60

Query: 1607 ASFVTTWMEPECEKLMLASINKNYVDMDEYPVTTEFQNRCVNMIAHLFNAPVGKDETALG 1428
            ASFVTTWMEPEC  L++ASINKNYVDMDEYPVTTE QNRCVN+IAHLFNAPVG+ ETA+G
Sbjct: 61   ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPVGEKETAVG 120

Query: 1427 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVDLKV 1248
            VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP DKPNIVTGANVQVCWEKFARYFEV+LK 
Sbjct: 121  VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 1247 VKLREGYYIMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVRKNKETGWDTP 1068
            VKL EGYY+MDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLL +KNKETGW+TP
Sbjct: 181  VKLTEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLSKKNKETGWNTP 240

Query: 1067 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKGDLPEDL 888
            IHVDAASGGFIAPF++PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK DLP++L
Sbjct: 241  IHVDAASGGFIAPFIWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPDEL 300

Query: 887  IFHINYLGADQPTFTLNFSKGSNQIIAQYYQFLRLGFEGYKSIMENCMENAKVLKQGLEK 708
            IFHINYLG+DQPTFTLNFSKGS QIIAQYYQF+RLGFEGYK IMENC+ENA+VL++GLEK
Sbjct: 301  IFHINYLGSDQPTFTLNFSKGSGQIIAQYYQFIRLGFEGYKRIMENCLENARVLREGLEK 360

Query: 707  MGRFTIVSKDIGVPLVAFTLKDSSQHTVFEIADNLRKFGWIVPAYTMPADAEHIAVLRVV 528
             GRF IVSKD GVPLVAF+LKDSS+HTVFEIA++LR+FGWI+PAYTMPA+A+HIAVLRVV
Sbjct: 361  TGRFDIVSKDKGVPLVAFSLKDSSKHTVFEIAESLRRFGWIIPAYTMPANAQHIAVLRVV 420

Query: 527  IREDFSCSLAERLLADIEKVLKDVDKYPSMISTRAANITSVVDERNGTHADGRVVTKTLR 348
            +REDF+ SLAERL++ I++V+K+ D  PS ++ +A+ I + VDE        + V K+ R
Sbjct: 421  VREDFNRSLAERLVSHIDQVMKETDSLPSRVAVQASRIVT-VDETQDNMDGKKTVKKSSR 479

Query: 347  NNTEEVANYWKKLVEQKKSTGAC 279
               EEV  YW++L  +K+ TGAC
Sbjct: 480  EIQEEVTLYWRRLASEKR-TGAC 501


>gb|AFK34235.1| unknown [Medicago truncatula]
          Length = 499

 Score =  805 bits (2080), Expect = 0.0
 Identities = 389/506 (76%), Positives = 447/506 (88%), Gaps = 4/506 (0%)
 Frame = -1

Query: 1784 MVLSTTAS----ESTSLHCTFASRYVLESLPRYKMPENSIPKEAAYQIISDELMLDGNPR 1617
            MV+S+T S    ++ S+ CTFASRYV E +P++KMPENSIPK+AAY+II+DELMLDG PR
Sbjct: 1    MVISSTVSHPDEQNESIACTFASRYVREQVPKFKMPENSIPKDAAYRIINDELMLDGKPR 60

Query: 1616 LNLASFVTTWMEPECEKLMLASINKNYVDMDEYPVTTEFQNRCVNMIAHLFNAPVGKDET 1437
            LNLASFVTTWMEPEC+KL++ S+NKNYVDMDEYPVTTE QNRCVN+IAHLFNAP+G +ET
Sbjct: 61   LNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGSEET 120

Query: 1436 ALGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVD 1257
            A+GVGTVGSSEAIMLAGLAFKRKWQ KRKAEGKP DKPNIVTGANVQVCWE+FARYFEV+
Sbjct: 121  AVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEQFARYFEVE 180

Query: 1256 LKVVKLREGYYIMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVRKNKETGW 1077
            LK VKL E YY+MDP+KAVEMVDENTICVAAILGSTLTGEFEDVKLLN+LL +KNKETGW
Sbjct: 181  LKEVKLTEDYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGW 240

Query: 1076 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKGDLP 897
            DTPIHVDAASGGF+APFLYPDL WDFRLPLVKSINVSGHKYGLVY G+GWVVWR K DLP
Sbjct: 241  DTPIHVDAASGGFVAPFLYPDLLWDFRLPLVKSINVSGHKYGLVYPGIGWVVWRHKADLP 300

Query: 896  EDLIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFLRLGFEGYKSIMENCMENAKVLKQG 717
            +DL+FHINYLG+DQPTFTLNFSKGS+QIIAQYYQF+RLGFEGYK++MENC+ N + LK+G
Sbjct: 301  DDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCLANTRTLKEG 360

Query: 716  LEKMGRFTIVSKDIGVPLVAFTLKDSSQHTVFEIADNLRKFGWIVPAYTMPADAEHIAVL 537
            +EK GRF IVSKDIGVPLVAF+LKDSS+HTVFEIAD+LRK+GWIVPAYTMPADA+HIAVL
Sbjct: 361  IEKTGRFKIVSKDIGVPLVAFSLKDSSKHTVFEIADHLRKYGWIVPAYTMPADAKHIAVL 420

Query: 536  RVVIREDFSCSLAERLLADIEKVLKDVDKYPSMISTRAANITSVVDERNGTHADGRVVTK 357
            RVVIREDFSCSLAERL++DIEKV+  +D  PS I+++ A++  +  E +        V K
Sbjct: 421  RVVIREDFSCSLAERLVSDIEKVVNLLDTLPSSINSKDAHVAVIASETS------EEVKK 474

Query: 356  TLRNNTEEVANYWKKLVEQKKSTGAC 279
             +     E+  YWKKLV+ K+  GAC
Sbjct: 475  DITETQAEILRYWKKLVDGKR-VGAC 499


>emb|CBI38262.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  805 bits (2080), Expect = 0.0
 Identities = 392/503 (77%), Positives = 446/503 (88%), Gaps = 1/503 (0%)
 Frame = -1

Query: 1784 MVLSTTASESTS-LHCTFASRYVLESLPRYKMPENSIPKEAAYQIISDELMLDGNPRLNL 1608
            MV+STT S+S+  LH TFASRYV + LP++KMPE SIPKEAA+QIISDELMLDGNPRLNL
Sbjct: 1    MVISTTISDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLNL 60

Query: 1607 ASFVTTWMEPECEKLMLASINKNYVDMDEYPVTTEFQNRCVNMIAHLFNAPVGKDETALG 1428
            ASFVTTWME EC+KL++AS+NKNYVDMDEYP+     NRCVNMIAHLFNAPVG++ETA+G
Sbjct: 61   ASFVTTWMEEECDKLIMASVNKNYVDMDEYPLVGPHHNRCVNMIAHLFNAPVGENETAIG 120

Query: 1427 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVDLKV 1248
            VGTVGSSEAIMLAGLAFKRKWQ KRK+EGKP DKPNIVTGANVQVCWEKFARYFEV+LK 
Sbjct: 121  VGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 1247 VKLREGYYIMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVRKNKETGWDTP 1068
            VKLREGYY+MDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLN+LL +KN ETGW TP
Sbjct: 181  VKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGTP 240

Query: 1067 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKGDLPEDL 888
            IHVDAASGGFIAPFL+PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK DLPE+L
Sbjct: 241  IHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEEL 300

Query: 887  IFHINYLGADQPTFTLNFSKGSNQIIAQYYQFLRLGFEGYKSIMENCMENAKVLKQGLEK 708
            IFHINYLG+DQPTFTLNFSKGS+QIIAQYYQF+RLGFEGYK+IM NCM+NA VLKQGL +
Sbjct: 301  IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLVE 360

Query: 707  MGRFTIVSKDIGVPLVAFTLKDSSQHTVFEIADNLRKFGWIVPAYTMPADAEHIAVLRVV 528
             GRF IVSKDIGVPLVAF+LKD+S +TVF+I++NLR++GWI+PAYTMP DAEHIAVLRVV
Sbjct: 361  TGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRVV 420

Query: 527  IREDFSCSLAERLLADIEKVLKDVDKYPSMISTRAANITSVVDERNGTHADGRVVTKTLR 348
            +REDFS SLAERLL+DIEKV++++D   S  +TRA ++                  KT+ 
Sbjct: 421  VREDFSRSLAERLLSDIEKVMREMDAVQSRATTRATHLNK----------------KTVM 464

Query: 347  NNTEEVANYWKKLVEQKKSTGAC 279
             N EE+A YWK++V++KK++G C
Sbjct: 465  ENREEIAMYWKRVVDRKKTSGVC 487


>ref|XP_003548319.1| PREDICTED: glutamate decarboxylase-like [Glycine max]
          Length = 499

 Score =  804 bits (2077), Expect = 0.0
 Identities = 393/506 (77%), Positives = 449/506 (88%), Gaps = 4/506 (0%)
 Frame = -1

Query: 1784 MVLSTTAS----ESTSLHCTFASRYVLESLPRYKMPENSIPKEAAYQIISDELMLDGNPR 1617
            MVL++TA+    +  SL+ TFASRYV E +P++KMPE SIPK+AAYQII+DELMLDG PR
Sbjct: 1    MVLTSTATHPDEQDQSLNYTFASRYVREPIPKFKMPEKSIPKDAAYQIINDELMLDGAPR 60

Query: 1616 LNLASFVTTWMEPECEKLMLASINKNYVDMDEYPVTTEFQNRCVNMIAHLFNAPVGKDET 1437
            LNLASFVTTWMEPEC+KL++AS+NKNYVDMDEYPVTTE QNRCVN+IA+LF+AP+  DET
Sbjct: 61   LNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPISDDET 120

Query: 1436 ALGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPCDKPNIVTGANVQVCWEKFARYFEVD 1257
            A+GVGTVGSSEAIMLAGLAFKRKWQ KRKAEGKP DKPNIVTGANVQVCWEKFARYFEV+
Sbjct: 121  AVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVE 180

Query: 1256 LKVVKLREGYYIMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLVRKNKETGW 1077
            LK VKL+EGYY+MDP KAVEMVDENTICVAAILGST+TGEFEDVKLL++LL +KN ETGW
Sbjct: 181  LKEVKLKEGYYVMDPAKAVEMVDENTICVAAILGSTMTGEFEDVKLLDELLTKKNNETGW 240

Query: 1076 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKGDLP 897
            DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY GVGWVVWR+K DLP
Sbjct: 241  DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLP 300

Query: 896  EDLIFHINYLGADQPTFTLNFSKGSNQIIAQYYQFLRLGFEGYKSIMENCMENAKVLKQG 717
            ++L+FHINYLG+DQPTFTLNFSKGS+QIIAQYYQ +RLGFEGYK+IMENC ENA+VLK+G
Sbjct: 301  DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCWENARVLKEG 360

Query: 716  LEKMGRFTIVSKDIGVPLVAFTLKDSSQHTVFEIADNLRKFGWIVPAYTMPADAEHIAVL 537
            +E+ GRF I+SKDIGVPLVAF+LKDSSQHTVFEIAD+LRKFGWIVPAYTMP DA+HIAVL
Sbjct: 361  IERTGRFNIISKDIGVPLVAFSLKDSSQHTVFEIADHLRKFGWIVPAYTMPPDAQHIAVL 420

Query: 536  RVVIREDFSCSLAERLLADIEKVLKDVDKYPSMISTRAANITSVVDERNGTHADGRVVTK 357
            RVVIREDFS  LAERL ADIEKV+K +D  PS ++T+A +IT++  E       G  + K
Sbjct: 421  RVVIREDFSRGLAERLAADIEKVVKLLDTLPSPLTTKAVHITAITSE------TGEKIKK 474

Query: 356  TLRNNTEEVANYWKKLVEQKKSTGAC 279
                  +E+A YWK+LV+ K+  GAC
Sbjct: 475  AAIETQKEIAFYWKRLVDGKR-LGAC 499


Top