BLASTX nr result

ID: Coptis25_contig00000116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000116
         (2056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265...   273   1e-70
emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]   273   1e-70
gb|ABK95523.1| unknown [Populus trichocarpa]                          267   9e-69
ref|XP_002304181.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-68
ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|2...   262   2e-67

>ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265296 [Vitis vinifera]
          Length = 417

 Score =  273 bits (699), Expect = 1e-70
 Identities = 159/292 (54%), Positives = 182/292 (62%), Gaps = 3/292 (1%)
 Frame = +1

Query: 811  DNFEAESA-NKEKSDGVEKTSNPEDTSXXXXXXXXXXXXXXXXDNG-HGDASPSAP-LNS 981
            D   AESA +KEKSD + + S  E                     G + D+S  AP  +S
Sbjct: 130  DESVAESAADKEKSDIINEASKTEGNDEKAAEDEKTRNEGKEDKGGENADSSAEAPPFSS 189

Query: 982  FQQLSSNQNXXXXXXXXXXXXXXXXXXXLAKDXXXXXXXXXXXXXXLFGQKNDXXXXXXX 1161
            FQQLSS+QN                   ++KD              LFG K D       
Sbjct: 190  FQQLSSSQNAFTGLAGTGFSSSAFSFGSISKDGSGLGGSSGS----LFGPKGDQSSFPTF 245

Query: 1162 XXXXXXXXXXXXXXTAGASDAAKSEGSGLPSMQEVPVETGEENEKAVFTADAVLFEYLDG 1341
                          + GA   +KSEGSG PS+QEVPVETGEENEKAVFTAD+VLFE+ DG
Sbjct: 246  GFGLSNNGNSSLFGSQGAPIISKSEGSGFPSLQEVPVETGEENEKAVFTADSVLFEFFDG 305

Query: 1342 GWKERGKGELKVNVSTTGVERARLVMRARGIYRLILNACLYPDMKLTSMDKRGITFACMN 1521
            GWKERGKGELKVNVS  GVE+ARLVMRA+G YRLILNA LYPDMKLT+M+KRGITFACMN
Sbjct: 306  GWKERGKGELKVNVSRDGVEKARLVMRAKGNYRLILNASLYPDMKLTNMEKRGITFACMN 365

Query: 1522 STGEGKDGLTTFALKFKDGSIVEEFCTAVTLHKGQKSGVLKTPENSPKASED 1677
            S GEGKDGL+TFALKFKD SIVEEF  AVT HKG+ + V+ TPENSPKAS+D
Sbjct: 366  SIGEGKDGLSTFALKFKDASIVEEFSVAVTAHKGKTATVMNTPENSPKASDD 417



 Score =  120 bits (300), Expect = 2e-24
 Identities = 63/93 (67%), Positives = 71/93 (76%)
 Frame = +2

Query: 347 MADAQNVVPPSKKRAAGREISRDNPGLDDDEDVPEQETGTFKKASEEVLATRRIVKVRRQ 526
           M DA+N VPPSKKRAAGRE+SRDNPGLDD+E  PEQE  TFKKAS EV+A RRIVKVRRQ
Sbjct: 1   MGDAENAVPPSKKRAAGRELSRDNPGLDDEES-PEQEGETFKKASNEVMANRRIVKVRRQ 59

Query: 527 QTPASASSNPFANLCFVPHTESTGIVSEVQPVA 625
           QT ++ SSNPFA +  VP TE     +EV   A
Sbjct: 60  QTASTPSSNPFAGIRLVPPTEPISAPAEVSTEA 92


>emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]
          Length = 449

 Score =  273 bits (699), Expect = 1e-70
 Identities = 159/292 (54%), Positives = 182/292 (62%), Gaps = 3/292 (1%)
 Frame = +1

Query: 811  DNFEAESA-NKEKSDGVEKTSNPEDTSXXXXXXXXXXXXXXXXDNG-HGDASPSAP-LNS 981
            D   AESA +KEKSD + + S  E                     G + D+S  AP  +S
Sbjct: 162  DESVAESAADKEKSDIINEASKTEGNDEKAAEDEKTGNEGKEDKGGENADSSAEAPPFSS 221

Query: 982  FQQLSSNQNXXXXXXXXXXXXXXXXXXXLAKDXXXXXXXXXXXXXXLFGQKNDXXXXXXX 1161
            FQQLSS+QN                   ++KD              LFG K D       
Sbjct: 222  FQQLSSSQNAFTGLAGTGFSSSTFSFGSISKDGSGLGGSSGS----LFGPKGDQSSFPTF 277

Query: 1162 XXXXXXXXXXXXXXTAGASDAAKSEGSGLPSMQEVPVETGEENEKAVFTADAVLFEYLDG 1341
                          + GA   +KSEGSG PS+QEVPVETGEENEKAVFTAD+VLFE+ DG
Sbjct: 278  GFGLSNNGNSSLFGSQGAPIISKSEGSGFPSLQEVPVETGEENEKAVFTADSVLFEFFDG 337

Query: 1342 GWKERGKGELKVNVSTTGVERARLVMRARGIYRLILNACLYPDMKLTSMDKRGITFACMN 1521
            GWKERGKGELKVNVS  GVE+ARLVMRA+G YRLILNA LYPDMKLT+M+KRGITFACMN
Sbjct: 338  GWKERGKGELKVNVSRDGVEKARLVMRAKGNYRLILNASLYPDMKLTNMEKRGITFACMN 397

Query: 1522 STGEGKDGLTTFALKFKDGSIVEEFCTAVTLHKGQKSGVLKTPENSPKASED 1677
            S GEGKDGL+TFALKFKD SIVEEF  AVT HKG+ + V+ TPENSPKAS+D
Sbjct: 398  SIGEGKDGLSTFALKFKDASIVEEFSVAVTAHKGKTATVMNTPENSPKASDD 449



 Score =  120 bits (300), Expect = 2e-24
 Identities = 63/93 (67%), Positives = 71/93 (76%)
 Frame = +2

Query: 347 MADAQNVVPPSKKRAAGREISRDNPGLDDDEDVPEQETGTFKKASEEVLATRRIVKVRRQ 526
           M DA+N VPPSKKRAAGRE+SRDNPGLDD+E  PEQE  TFKKAS EV+A RRIVKVRRQ
Sbjct: 1   MGDAENAVPPSKKRAAGRELSRDNPGLDDEES-PEQEGETFKKASHEVMANRRIVKVRRQ 59

Query: 527 QTPASASSNPFANLCFVPHTESTGIVSEVQPVA 625
           QT ++ SSNPFA +  VP TE     +EV   A
Sbjct: 60  QTASTPSSNPFAGIRLVPPTEPISAPAEVSTEA 92


>gb|ABK95523.1| unknown [Populus trichocarpa]
          Length = 517

 Score =  267 bits (682), Expect = 9e-69
 Identities = 148/250 (59%), Positives = 168/250 (67%), Gaps = 3/250 (1%)
 Frame = +1

Query: 937  DNGHGDASPS---APLNSFQQLSSNQNXXXXXXXXXXXXXXXXXXXLAKDXXXXXXXXXX 1107
            DNG+    PS   APLNSFQQLSS+QN                   + KD          
Sbjct: 279  DNGNEIVYPSTEGAPLNSFQQLSSSQNAFTGLAGTGFSTSTFTFGSVPKDGSVLGSGSGS 338

Query: 1108 XXXXLFGQKNDXXXXXXXXXXXXXXXXXXXXXTAGASDAAKSEGSGLPSMQEVPVETGEE 1287
                LFGQKN+                     ++ +S  +K+EGSG PSMQEVPVETGEE
Sbjct: 339  ----LFGQKNEQPSFGFGLSNNGS--------SSLSSVVSKTEGSGFPSMQEVPVETGEE 386

Query: 1288 NEKAVFTADAVLFEYLDGGWKERGKGELKVNVSTTGVERARLVMRARGIYRLILNACLYP 1467
            NE+ VF+AD+VLFE+LDGGWKERGKGELKVNVS+ G ERARL+MRARG +RLILNA LYP
Sbjct: 387  NERVVFSADSVLFEFLDGGWKERGKGELKVNVSSAGAERARLLMRARGHFRLILNASLYP 446

Query: 1468 DMKLTSMDKRGITFACMNSTGEGKDGLTTFALKFKDGSIVEEFCTAVTLHKGQKSGVLKT 1647
            DMKL +MDKRGITFACMNS GEGKD L+TFALKFKDGSIVEEFC AVT HK +    +KT
Sbjct: 447  DMKLANMDKRGITFACMNSIGEGKDSLSTFALKFKDGSIVEEFCAAVTAHKDKAPAAMKT 506

Query: 1648 PENSPKASED 1677
            PENSPKAS D
Sbjct: 507  PENSPKASSD 516



 Score =  108 bits (269), Expect = 7e-21
 Identities = 57/81 (70%), Positives = 64/81 (79%)
 Frame = +2

Query: 347 MADAQNVVPPSKKRAAGREISRDNPGLDDDEDVPEQETGTFKKASEEVLATRRIVKVRRQ 526
           M DA+N +  SKKRAA  EISRDNPGLDDD  V EQETGTFKKAS+EVLA R+IVKVRR 
Sbjct: 1   MGDAENALTSSKKRAASSEISRDNPGLDDDGSV-EQETGTFKKASDEVLARRKIVKVRRS 59

Query: 527 QTPASASSNPFANLCFVPHTE 589
           QT ++ SSNPFA +  VP TE
Sbjct: 60  QTTSTPSSNPFAGIRLVPPTE 80


>ref|XP_002304181.1| predicted protein [Populus trichocarpa] gi|222841613|gb|EEE79160.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  266 bits (681), Expect = 1e-68
 Identities = 148/250 (59%), Positives = 167/250 (66%), Gaps = 3/250 (1%)
 Frame = +1

Query: 937  DNGHGDASPS---APLNSFQQLSSNQNXXXXXXXXXXXXXXXXXXXLAKDXXXXXXXXXX 1107
            DNG+    PS   APLNSFQQLSS+QN                   + KD          
Sbjct: 199  DNGNEIVYPSTEGAPLNSFQQLSSSQNAFTGLAGTGFSTSTFTFGSVPKDGSVLGSGSGS 258

Query: 1108 XXXXLFGQKNDXXXXXXXXXXXXXXXXXXXXXTAGASDAAKSEGSGLPSMQEVPVETGEE 1287
                LFGQKN+                     ++ +S  +K+EGSG PSMQEVPVETGEE
Sbjct: 259  ----LFGQKNEQPSFGFGLSNNGS--------SSLSSVVSKTEGSGFPSMQEVPVETGEE 306

Query: 1288 NEKAVFTADAVLFEYLDGGWKERGKGELKVNVSTTGVERARLVMRARGIYRLILNACLYP 1467
            NE+ VF+AD+VLFE+LDGGWKERGKGELKVNVS  G ERARL+MRARG +RLILNA LYP
Sbjct: 307  NERVVFSADSVLFEFLDGGWKERGKGELKVNVSAAGAERARLLMRARGHFRLILNASLYP 366

Query: 1468 DMKLTSMDKRGITFACMNSTGEGKDGLTTFALKFKDGSIVEEFCTAVTLHKGQKSGVLKT 1647
            DMKL +MDKRGITFACMNS GEGKD L+TFALKFKDGSIVEEFC AVT HK +    +KT
Sbjct: 367  DMKLANMDKRGITFACMNSIGEGKDSLSTFALKFKDGSIVEEFCAAVTAHKDKAPAAMKT 426

Query: 1648 PENSPKASED 1677
            PENSPKAS D
Sbjct: 427  PENSPKASSD 436



 Score =  108 bits (269), Expect = 7e-21
 Identities = 57/81 (70%), Positives = 64/81 (79%)
 Frame = +2

Query: 347 MADAQNVVPPSKKRAAGREISRDNPGLDDDEDVPEQETGTFKKASEEVLATRRIVKVRRQ 526
           M DA+N +  SKKRAA  EISRDNPGLDDD  V EQETGTFKKAS+EVLA R+IVKVRR 
Sbjct: 1   MGDAENALTSSKKRAASSEISRDNPGLDDDGSV-EQETGTFKKASDEVLARRKIVKVRRS 59

Query: 527 QTPASASSNPFANLCFVPHTE 589
           QT ++ SSNPFA +  VP TE
Sbjct: 60  QTTSTPSSNPFAGIRLVPPTE 80


>ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|222846892|gb|EEE84439.1|
            predicted protein [Populus trichocarpa]
          Length = 469

 Score =  262 bits (670), Expect = 2e-67
 Identities = 146/250 (58%), Positives = 169/250 (67%), Gaps = 3/250 (1%)
 Frame = +1

Query: 937  DNGHGDASPS---APLNSFQQLSSNQNXXXXXXXXXXXXXXXXXXXLAKDXXXXXXXXXX 1107
            DNG  +  PS   APLNSFQQLSS+QN                     KD          
Sbjct: 232  DNGSENVDPSSEGAPLNSFQQLSSSQNAFTGLAGTGFSTTSFTFGSFPKDGSVMGGGSGS 291

Query: 1108 XXXXLFGQKNDXXXXXXXXXXXXXXXXXXXXXTAGASDAAKSEGSGLPSMQEVPVETGEE 1287
                LFGQKN+                     ++ AS  +K+EG+G PSMQEVPVETGEE
Sbjct: 292  ----LFGQKNEQPSFGFGLSNNGS--------SSLASIVSKTEGTGFPSMQEVPVETGEE 339

Query: 1288 NEKAVFTADAVLFEYLDGGWKERGKGELKVNVSTTGVERARLVMRARGIYRLILNACLYP 1467
            NE+ VF+AD+V+FE+LDGGWKERGKGEL+VNVSTTG ERARL+MRARG +RLILNA +YP
Sbjct: 340  NERVVFSADSVVFEFLDGGWKERGKGELRVNVSTTGAERARLLMRARGNFRLILNANIYP 399

Query: 1468 DMKLTSMDKRGITFACMNSTGEGKDGLTTFALKFKDGSIVEEFCTAVTLHKGQKSGVLKT 1647
            DMKLT+MDKRGITFACMNS GEGKD L+TFALKFKD SIVEEF TAVT H+ +    LKT
Sbjct: 400  DMKLTNMDKRGITFACMNSIGEGKDSLSTFALKFKDSSIVEEFRTAVTAHRDKAPVALKT 459

Query: 1648 PENSPKASED 1677
            PENSPKAS++
Sbjct: 460  PENSPKASDE 469



 Score =  120 bits (302), Expect = 1e-24
 Identities = 62/81 (76%), Positives = 70/81 (86%)
 Frame = +2

Query: 347 MADAQNVVPPSKKRAAGREISRDNPGLDDDEDVPEQETGTFKKASEEVLATRRIVKVRRQ 526
           M DA+N +PPSKKRAAGREISRDNPGLDDD+ V EQETGTFK+ASEEVLA RRIVKVRR 
Sbjct: 1   MGDAENSLPPSKKRAAGREISRDNPGLDDDDSV-EQETGTFKRASEEVLAGRRIVKVRRN 59

Query: 527 QTPASASSNPFANLCFVPHTE 589
           QT ++ SSNPFA++  VP TE
Sbjct: 60  QTTSTPSSNPFASIRLVPPTE 80


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