BLASTX nr result

ID: Coptis25_contig00000111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000111
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23362.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    99   4e-19
ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|ABR16195.1| unknown [Picea sitchensis]                              94   9e-18

>emb|CBI23362.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/65 (70%), Positives = 52/65 (80%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W++AGPAI TSL QYSL  +TQ   GH+GTLELAA  ++N  IAG  FGVMLGMGSALET
Sbjct: 701 WYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALET 760

Query: 375 LCGQA 389
           LCGQA
Sbjct: 761 LCGQA 765



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/65 (64%), Positives = 48/65 (73%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W IAGPAI T L +YSL  +TQ  VGHIG L+LAAF ++N  I+    G MLGMGSALET
Sbjct: 90  WHIAGPAIFTYLCRYSLGAITQVFVGHIGALQLAAFAVENSVISMFSLGTMLGMGSALET 149

Query: 375 LCGQA 389
           LCGQA
Sbjct: 150 LCGQA 154


>ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 544

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/65 (70%), Positives = 52/65 (80%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W++AGPAI TSL QYSL  +TQ   GH+GTLELAA  ++N  IAG  FGVMLGMGSALET
Sbjct: 93  WYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALET 152

Query: 375 LCGQA 389
           LCGQA
Sbjct: 153 LCGQA 157


>ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|222851587|gb|EEE89134.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W++AGPAI T+L QYSL  +TQ + GH+GTL+LAA  ++N  IAG  FG+MLGMGSALET
Sbjct: 24  WYLAGPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENSVIAGFSFGIMLGMGSALET 83

Query: 375 LCGQA 389
           LCGQA
Sbjct: 84  LCGQA 88


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W++AGPAI T+L QYSL  +TQ + GH+GTL+LAA  ++N  IAG  FG+MLGMGSALET
Sbjct: 61  WYLAGPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENSVIAGFSFGIMLGMGSALET 120

Query: 375 LCGQA 389
           LCGQA
Sbjct: 121 LCGQA 125


>gb|ABR16195.1| unknown [Picea sitchensis]
          Length = 500

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/65 (64%), Positives = 53/65 (81%)
 Frame = +3

Query: 195 WFIAGPAILTSLFQYSLATVTQTMVGHIGTLELAAFGMQNLFIAGIGFGVMLGMGSALET 374
           W+++GPAI TS+ QYSL  +TQT  GHIG LELAA  ++N  IAG+ FG+M+GMGSALET
Sbjct: 58  WYLSGPAIFTSVCQYSLGALTQTFAGHIGELELAAVSIENSVIAGLSFGIMMGMGSALET 117

Query: 375 LCGQA 389
           LCGQ+
Sbjct: 118 LCGQS 122


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