BLASTX nr result

ID: Coptis25_contig00000104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000104
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis...   158   4e-37
ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus commu...   157   9e-37
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   153   2e-35
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   152   3e-35
ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   151   5e-35

>ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis sativus]
           gi|449480993|ref|XP_004156050.1| PREDICTED:
           dihydropyrimidinase-like [Cucumis sativus]
          Length = 528

 Score =  158 bits (400), Expect = 4e-37
 Identities = 72/86 (83%), Positives = 81/86 (94%)
 Frame = -1

Query: 258 GGIDQHTHLGMEFMGTETIDDFFSGQAATLAGGTTMHIDFVIPVNGSLSAGFKAYTKKAQ 79
           GGID HTHL  EFMGTET+DDFF+GQAA LAGGTTMHIDFVIPVNGSLSAGF++Y KKA+
Sbjct: 96  GGIDPHTHLAFEFMGTETVDDFFTGQAAALAGGTTMHIDFVIPVNGSLSAGFESYVKKAK 155

Query: 78  RSCMDYGFHMAITKWDEVVARDMKIM 1
           +SCMDYGFHMAITKWDEVVA++M+IM
Sbjct: 156 KSCMDYGFHMAITKWDEVVAQEMEIM 181


>ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus communis]
           gi|223529606|gb|EEF31555.1| dihydropyrimidinase,
           putative [Ricinus communis]
          Length = 503

 Score =  157 bits (397), Expect = 9e-37
 Identities = 71/86 (82%), Positives = 81/86 (94%)
 Frame = -1

Query: 258 GGIDQHTHLGMEFMGTETIDDFFSGQAATLAGGTTMHIDFVIPVNGSLSAGFKAYTKKAQ 79
           GGID HTHL M+FMGT+TIDDFFSGQAA LAGGTTMHIDFVIPVNGSL AG++AY KKA+
Sbjct: 108 GGIDPHTHLAMDFMGTQTIDDFFSGQAAALAGGTTMHIDFVIPVNGSLMAGYEAYEKKAK 167

Query: 78  RSCMDYGFHMAITKWDEVVARDMKIM 1
           +SCMDYGFHMAITKWDEV++R+M+IM
Sbjct: 168 KSCMDYGFHMAITKWDEVISREMEIM 193


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
           gi|297319392|gb|EFH49814.1| dihydropyrimidinase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = -1

Query: 258 GGIDQHTHLGMEFMGTETIDDFFSGQAATLAGGTTMHIDFVIPVNGSLSAGFKAYTKKAQ 79
           GGID HTHL MEFMGTETIDDFFSGQAA LAGGTTMHIDFVIP+NG+L AGF+AY  K++
Sbjct: 98  GGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPINGNLVAGFEAYENKSR 157

Query: 78  RSCMDYGFHMAITKWDEVVARDMKIM 1
            SCMDYGFHMAITKWDE V+RDM+I+
Sbjct: 158 ESCMDYGFHMAITKWDEGVSRDMEIL 183


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
           gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
           amidohydrolase [Arabidopsis thaliana]
           gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
           [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
           pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/86 (81%), Positives = 78/86 (90%)
 Frame = -1

Query: 258 GGIDQHTHLGMEFMGTETIDDFFSGQAATLAGGTTMHIDFVIPVNGSLSAGFKAYTKKAQ 79
           GGID HTHL MEFMGTETIDDFFSGQAA LAGGTTMHIDFVIPVNG+L AGF+AY  K++
Sbjct: 98  GGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVNGNLVAGFEAYENKSR 157

Query: 78  RSCMDYGFHMAITKWDEVVARDMKIM 1
            SCMDYGFHMAITKWDE V+RDM+++
Sbjct: 158 ESCMDYGFHMAITKWDEGVSRDMEML 183


>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
           gi|296083879|emb|CBI24267.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/86 (82%), Positives = 77/86 (89%)
 Frame = -1

Query: 258 GGIDQHTHLGMEFMGTETIDDFFSGQAATLAGGTTMHIDFVIPVNGSLSAGFKAYTKKAQ 79
           GGID HTHL MEFMGTETIDDFFSGQAA LAGGTTMHIDFVIPV GSLS G +AY  KA+
Sbjct: 104 GGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVKGSLSKGLEAYKDKAK 163

Query: 78  RSCMDYGFHMAITKWDEVVARDMKIM 1
           +SCMDYGFHMAITKWDE V+R+M+IM
Sbjct: 164 KSCMDYGFHMAITKWDENVSREMEIM 189


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