BLASTX nr result

ID: Coptis25_contig00000103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000103
         (2428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   496   0.0  
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   491   0.0  
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   490   0.0  
ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|2...   489   0.0  
ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|2...   489   0.0  

>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
            gi|296083879|emb|CBI24267.3| unnamed protein product
            [Vitis vinifera]
          Length = 536

 Score =  496 bits (1276), Expect(2) = 0.0
 Identities = 248/304 (81%), Positives = 272/304 (89%), Gaps = 7/304 (2%)
 Frame = +2

Query: 824  EVCDV---YGDFEC----GSSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGD 982
            E CD    +GD  C     S+SKLLIKGGTVVNAHHQE+ADVYVE+GIIV V+PNIKVGD
Sbjct: 30   EFCDAGTGFGDSGCVVSSKSASKLLIKGGTVVNAHHQEIADVYVEDGIIVAVKPNIKVGD 89

Query: 983  DVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVNG 1162
            DVTVLDATGK+VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVIPV G
Sbjct: 90   DVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVKG 149

Query: 1163 SLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGILM 1342
            SLS G E Y  KA++SCMDYGFHMAITKWDE V+R+MEIMV+EKGINSFKFFLAYKG LM
Sbjct: 150  SLSKGLEAYKDKAKKSCMDYGFHMAITKWDENVSREMEIMVKEKGINSFKFFLAYKGALM 209

Query: 1343 VSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGEA 1522
            ++DELLL+G KKCKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPPVLEGEA
Sbjct: 210  INDELLLEGLKKCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEA 269

Query: 1523 TSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNNDF 1702
            T+R IRLA+FVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEP+VSGLVLDDS LW+ DF
Sbjct: 270  TARAIRLASFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPVVSGLVLDDSGLWDPDF 329

Query: 1703 TTAA 1714
              AA
Sbjct: 330  INAA 333



 Score =  357 bits (917), Expect(2) = 0.0
 Identities = 171/209 (81%), Positives = 191/209 (91%)
 Frame = +1

Query: 1783 DFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNG 1962
            DF  AAKYVMSPPIR LGH KALQAALSTG LQLVGTDHC +NSTQKA GIDDFRKIPNG
Sbjct: 328  DFINAAKYVMSPPIRALGHDKALQAALSTGNLQLVGTDHCAFNSTQKAFGIDDFRKIPNG 387

Query: 1963 VNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNP 2142
            VNGIEERMHL+WDTMVESGQISVT +V++TSTECA+IFN+YPRKGAI AGSDADIII NP
Sbjct: 388  VNGIEERMHLVWDTMVESGQISVTDYVRITSTECARIFNMYPRKGAILAGSDADIIILNP 447

Query: 2143 NSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWENDELKVVPGSGKYIKMPPF 2322
            NSSF+I+ARSHHSR DTNV+EGR+GKGKVEVTI+GG+IVWENDELK VPGSGKYI+M PF
Sbjct: 448  NSSFQITARSHHSRLDTNVFEGRKGKGKVEVTIAGGKIVWENDELKAVPGSGKYIEMQPF 507

Query: 2323 GHMFSGMDKIDAAYLSSLHAPVQRIRTAS 2409
             ++F+G+DK+DA YLSSL APVQR + AS
Sbjct: 508  SYLFNGIDKVDAKYLSSLQAPVQRSKAAS 536


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
            gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
            amidohydrolase [Arabidopsis thaliana]
            gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
            [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
            pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 236/288 (81%), Positives = 267/288 (92%), Gaps = 1/288 (0%)
 Frame = +2

Query: 854  CG-SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGDDVTVLDATGKYVMPGG 1030
            CG SS+++LIKGGTVVNAHHQE+ADVYVENGIIV VQPNIKVGD+VTVLDATGK+VMPGG
Sbjct: 40   CGVSSTRILIKGGTVVNAHHQELADVYVENGIIVAVQPNIKVGDEVTVLDATGKFVMPGG 99

Query: 1031 IDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVNGSLSAGFEGYTKKAERS 1210
            IDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVIPVNG+L AGFE Y  K+  S
Sbjct: 100  IDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVNGNLVAGFEAYENKSRES 159

Query: 1211 CMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGILMVSDELLLQGFKKCKSL 1390
            CMDYGFHMAITKWDE V+RDME++V+EKGINSFKFFLAYKG LMV+D+LLL+G K+CKSL
Sbjct: 160  CMDYGFHMAITKWDEGVSRDMEMLVKEKGINSFKFFLAYKGSLMVTDDLLLEGLKRCKSL 219

Query: 1391 GALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGEATSRVIRLAAFVNTPLY 1570
            GALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPPVLEGEAT+R IRLA F+NTPLY
Sbjct: 220  GALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLARFINTPLY 279

Query: 1571 VVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNNDFTTAA 1714
            VVHVMS+DAM+EIAKARKSGQ+VIGEP+VSGL+LDD WLW+ DFT A+
Sbjct: 280  VVHVMSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIAS 327



 Score =  361 bits (927), Expect(2) = 0.0
 Identities = 171/207 (82%), Positives = 194/207 (93%)
 Frame = +1

Query: 1783 DFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNG 1962
            DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT+NSTQKALG+DDFR+IPNG
Sbjct: 322  DFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCTFNSTQKALGLDDFRRIPNG 381

Query: 1963 VNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNP 2142
            VNG+EERMHLIWDTMVESGQ+S T +V++TSTECA+IFNIYPRKGAI AGSDADIII NP
Sbjct: 382  VNGLEERMHLIWDTMVESGQLSATDYVRITSTECARIFNIYPRKGAILAGSDADIIILNP 441

Query: 2143 NSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWENDELKVVPGSGKYIKMPPF 2322
            NSS+EIS++SHHSRSDTNVYEGRRGKGKVEVTI+GGRIVWEN+ELKVVP SGKYI+MPPF
Sbjct: 442  NSSYEISSKSHHSRSDTNVYEGRRGKGKVEVTIAGGRIVWENEELKVVPRSGKYIEMPPF 501

Query: 2323 GHMFSGMDKIDAAYLSSLHAPVQRIRT 2403
             ++F G++K DA YLSSL APV+R+RT
Sbjct: 502  SYLFDGIEKSDANYLSSLRAPVKRVRT 528


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
            gi|297319392|gb|EFH49814.1| dihydropyrimidinase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  490 bits (1262), Expect(2) = 0.0
 Identities = 237/293 (80%), Positives = 268/293 (91%), Gaps = 1/293 (0%)
 Frame = +2

Query: 839  YGDFECG-SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGDDVTVLDATGKY 1015
            YG   CG SS+++LIKGG VVNAHHQE+ADVYVE+GIIV VQPNIKVGD+VTVLDATGK+
Sbjct: 35   YGVGSCGVSSTRILIKGGIVVNAHHQELADVYVEDGIIVAVQPNIKVGDEVTVLDATGKF 94

Query: 1016 VMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVNGSLSAGFEGYTK 1195
            VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVIP+NG+L AGFE Y  
Sbjct: 95   VMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPINGNLVAGFEAYEN 154

Query: 1196 KAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGILMVSDELLLQGFK 1375
            K+  SCMDYGFHMAITKWDE V+RDMEI+V+EKGINSFKFFLAYKG LMV+D+LLL+G K
Sbjct: 155  KSRESCMDYGFHMAITKWDEGVSRDMEILVKEKGINSFKFFLAYKGSLMVTDDLLLEGLK 214

Query: 1376 KCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGEATSRVIRLAAFV 1555
            +CKSLGALAMVHAENGDAV EGQ RMI+LGITGPEGHALSRPPVLEGEAT+R IRLA FV
Sbjct: 215  RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLARFV 274

Query: 1556 NTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNNDFTTAA 1714
            NTPLYVVHVMS+DAM+EIAKARKSGQ+VIGEP+VSGL+LDD WLW+ DFT A+
Sbjct: 275  NTPLYVVHVMSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIAS 327



 Score =  360 bits (923), Expect(2) = 0.0
 Identities = 172/207 (83%), Positives = 193/207 (93%)
 Frame = +1

Query: 1783 DFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNG 1962
            DFT A+KYVMSPPIR +GHGKALQ ALSTGILQLVGTDHCT+NSTQKALG+DDFRKIPNG
Sbjct: 322  DFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCTFNSTQKALGLDDFRKIPNG 381

Query: 1963 VNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNP 2142
            VNG+EERMHLIWDTMV SGQIS T +V++TSTE A+IFNIYPRKGAI AGSDADIII NP
Sbjct: 382  VNGLEERMHLIWDTMVGSGQISATDYVRITSTESARIFNIYPRKGAILAGSDADIIILNP 441

Query: 2143 NSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWENDELKVVPGSGKYIKMPPF 2322
            NSS+EIS++SHHSRSDTNVYEGRRGKGKVEVTI+GGRIVWEN+ELKVVPGSGKYI+MPPF
Sbjct: 442  NSSYEISSKSHHSRSDTNVYEGRRGKGKVEVTIAGGRIVWENEELKVVPGSGKYIEMPPF 501

Query: 2323 GHMFSGMDKIDAAYLSSLHAPVQRIRT 2403
             ++F G++K DA YLSSL APV+R+RT
Sbjct: 502  SYLFDGIEKSDANYLSSLRAPVKRVRT 528


>ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|222847228|gb|EEE84775.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  489 bits (1259), Expect(2) = 0.0
 Identities = 239/295 (81%), Positives = 271/295 (91%), Gaps = 3/295 (1%)
 Frame = +2

Query: 839  YGDFECG---SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVGDDVTVLDATG 1009
            Y +  CG   SS+KLLIKGGTVVNAHHQE+ADVYV++GIIV V+PN++VGDDV V+DATG
Sbjct: 9    YDEVGCGISSSSTKLLIKGGTVVNAHHQEIADVYVKDGIIVAVKPNLRVGDDVKVIDATG 68

Query: 1010 KYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVNGSLSAGFEGY 1189
            K+VMPGGIDPHTHL ++  NTESVDDFF+GQAAALAGGTTMHIDFVIPVNGSL AG + Y
Sbjct: 69   KFVMPGGIDPHTHLAVEALNTESVDDFFSGQAAALAGGTTMHIDFVIPVNGSLIAGLKAY 128

Query: 1190 TKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGILMVSDELLLQG 1369
             KKA++SCMDYGFHM ITK+D++V+RDMEIMV+EKGINSFKFFLAYKG+LMV+DELLL+G
Sbjct: 129  EKKAKKSCMDYGFHMVITKFDDIVSRDMEIMVKEKGINSFKFFLAYKGVLMVNDELLLEG 188

Query: 1370 FKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGEATSRVIRLAA 1549
             K+CKSLGALAMVHAENGDAV EGQ RMI LGITGPEGHALSRPP+LEGEAT+R IRLA 
Sbjct: 189  LKRCKSLGALAMVHAENGDAVFEGQKRMIQLGITGPEGHALSRPPLLEGEATARAIRLAG 248

Query: 1550 FVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNNDFTTAA 1714
            FVNTPLYVVHVMSIDAMEEIAKARKSGQRV+GEP+VSGL LDDS LW++DFTTA+
Sbjct: 249  FVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLALDDSGLWDSDFTTAS 303



 Score =  358 bits (919), Expect(2) = 0.0
 Identities = 170/209 (81%), Positives = 194/209 (92%)
 Frame = +1

Query: 1783 DFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNG 1962
            DFTTA+KYVMSPPIR  GHGKALQ ALS G+LQLVGTDHC +NSTQKA GIDDFRKIPNG
Sbjct: 298  DFTTASKYVMSPPIRASGHGKALQDALSNGVLQLVGTDHCVFNSTQKASGIDDFRKIPNG 357

Query: 1963 VNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNP 2142
            VNGIEERMHL+WD MVESGQISVT +V+VTSTECA+IFNIYPRKGAI AGSDADIII NP
Sbjct: 358  VNGIEERMHLVWDLMVESGQISVTDYVRVTSTECARIFNIYPRKGAIIAGSDADIIILNP 417

Query: 2143 NSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWENDELKVVPGSGKYIKMPPF 2322
            NS+FEI+ARSHHSR+DTNVYEGRRGKGKVEVTI+GGR+VWEN+ELKVVPGSGKYI+M PF
Sbjct: 418  NSTFEINARSHHSRTDTNVYEGRRGKGKVEVTIAGGRVVWENNELKVVPGSGKYIEMAPF 477

Query: 2323 GHMFSGMDKIDAAYLSSLHAPVQRIRTAS 2409
             ++FSG+D+ DA+YLSSL+APV+R ++ +
Sbjct: 478  SYLFSGIDRADASYLSSLNAPVKRFKSTT 506


>ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|222849678|gb|EEE87225.1|
            predicted protein [Populus trichocarpa]
          Length = 531

 Score =  489 bits (1259), Expect(2) = 0.0
 Identities = 243/305 (79%), Positives = 274/305 (89%), Gaps = 2/305 (0%)
 Frame = +2

Query: 806  ESNQIPEVCDVYGDFECG--SSSKLLIKGGTVVNAHHQEVADVYVENGIIVTVQPNIKVG 979
            +SNQ  E    YG+  CG  SS+KLLIKGGTVVNAHHQEVADVYVE+GIIV V+P++KV 
Sbjct: 24   QSNQFCEAGIGYGEVGCGLSSSTKLLIKGGTVVNAHHQEVADVYVEDGIIVAVKPDLKVT 83

Query: 980  DDVTVLDATGKYVMPGGIDPHTHLGMKYKNTESVDDFFNGQAAALAGGTTMHIDFVIPVN 1159
            DDV V+DATGK+VMPGGIDPHTHL M++  TE++DDFF+GQAAALAGGTTMHIDFVIPVN
Sbjct: 84   DDVKVIDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVN 143

Query: 1160 GSLSAGFEGYTKKAERSCMDYGFHMAITKWDEVVARDMEIMVREKGINSFKFFLAYKGIL 1339
            GSL AG E Y +KA++SCMDYGFHMAITK+D+ V+RDMEIMV+EKGINSFKFFLAYKG L
Sbjct: 144  GSLIAGLESYEEKAKKSCMDYGFHMAITKFDDSVSRDMEIMVKEKGINSFKFFLAYKGSL 203

Query: 1340 MVSDELLLQGFKKCKSLGALAMVHAENGDAVAEGQIRMIDLGITGPEGHALSRPPVLEGE 1519
            MV+DELLL+G K+CKSLGALAMVHAENGDAV EGQ RMI LGITGPEGHALSRPP+LEGE
Sbjct: 204  MVNDELLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIQLGITGPEGHALSRPPLLEGE 263

Query: 1520 ATSRVIRLAAFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLVLDDSWLWNND 1699
            AT+R IRLA FVNTPLYVVHVMSIDAMEEIAKARKSGQRV+GEP+VSGLVLDDS LW++D
Sbjct: 264  ATARAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSGLWDSD 323

Query: 1700 FTTAA 1714
            F  A+
Sbjct: 324  FAIAS 328



 Score =  355 bits (911), Expect(2) = 0.0
 Identities = 166/209 (79%), Positives = 191/209 (91%)
 Frame = +1

Query: 1783 DFTTAAKYVMSPPIRKLGHGKALQAALSTGILQLVGTDHCTYNSTQKALGIDDFRKIPNG 1962
            DF  A+K+VMSPPIR  GH K LQ ALS G+LQLVGTDHC +NSTQKA GIDDFRKIPNG
Sbjct: 323  DFAIASKFVMSPPIRAAGHNKVLQGALSNGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNG 382

Query: 1963 VNGIEERMHLIWDTMVESGQISVTKFVQVTSTECAQIFNIYPRKGAIFAGSDADIIIFNP 2142
            VNGIEERMHL+WDTMVESGQIS+  FV+VTSTECA++FNIYPRKGAI AGSDADIII NP
Sbjct: 383  VNGIEERMHLVWDTMVESGQISINDFVRVTSTECARVFNIYPRKGAIIAGSDADIIILNP 442

Query: 2143 NSSFEISARSHHSRSDTNVYEGRRGKGKVEVTISGGRIVWENDELKVVPGSGKYIKMPPF 2322
            NSSFEI+ARSHHSR+DTNVYEGRRGKGKVEVTI+GGR+VWEN+ELKVVPGSGKYI+MPPF
Sbjct: 443  NSSFEINARSHHSRTDTNVYEGRRGKGKVEVTIAGGRVVWENNELKVVPGSGKYIEMPPF 502

Query: 2323 GHMFSGMDKIDAAYLSSLHAPVQRIRTAS 2409
             ++FSG+DK DA+Y+SSL+APV+R ++ +
Sbjct: 503  NYLFSGIDKADASYISSLNAPVKRSKSTT 531


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