BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000072
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   308   1e-81
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   305   9e-81
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   305   9e-81
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   299   5e-79
sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   298   7e-79

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  308 bits (788), Expect = 1e-81
 Identities = 151/177 (85%), Positives = 168/177 (94%)
 Frame = +3

Query: 12  PTEKPPKFYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASG 191
           P EKPPKFYPADDVKKP +NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL+SG
Sbjct: 57  PAEKPPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSG 116

Query: 192 LLLVTGPFKINGVPLRRVNQSYVIATSTKVEITGLDVAKFDDKYFAKEVARKKKKGEGEF 371
           LLL+TGPFKINGVPLRRVNQSYVIATSTKV+I+G++V KFDDK+FAK+  +KKKKGEGEF
Sbjct: 117 LLLITGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEF 176

Query: 372 YEADKEEKNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHELVF 542
           +EA+K+EKNVLPQ KKDDQK VD++LIKSIE+VPELKAYLAARFSLK+GMKPHELVF
Sbjct: 177 FEAEKDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  305 bits (780), Expect = 9e-81
 Identities = 150/179 (83%), Positives = 165/179 (92%)
 Frame = +3

Query: 6   QKPTEKPPKFYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLA 185
           + P EKPPKFYPADDVKKP VNKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFL QL 
Sbjct: 53  EAPAEKPPKFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLP 112

Query: 186 SGLLLVTGPFKINGVPLRRVNQSYVIATSTKVEITGLDVAKFDDKYFAKEVARKKKKGEG 365
           SGLLLVTGPFK+NGVPLRRVNQSYVIATSTKV+ITG+ V KFDDKYF+KEV +KKKKGEG
Sbjct: 113 SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEG 172

Query: 366 EFYEADKEEKNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHELVF 542
           EF+EA+KEEK+ LPQ KKDDQKAVDS+L+KSIE+V +LK YLAARFSLK+GMKPHELVF
Sbjct: 173 EFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  305 bits (780), Expect = 9e-81
 Identities = 150/177 (84%), Positives = 165/177 (93%)
 Frame = +3

Query: 12  PTEKPPKFYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASG 191
           P EKPPKFYPADD+KKP  NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL+SG
Sbjct: 55  PAEKPPKFYPADDIKKPLHNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSG 114

Query: 192 LLLVTGPFKINGVPLRRVNQSYVIATSTKVEITGLDVAKFDDKYFAKEVARKKKKGEGEF 371
           LLLVTGPFKINGVPLRRVNQSYVIATSTKV+I+G++  KFDDKYFAK+  ++KKKGEGEF
Sbjct: 115 LLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEF 174

Query: 372 YEADKEEKNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHELVF 542
           +EA+KEEKNVLPQ KKDDQK +D++LIKSIE VPELKAYLAARFSLK+GMKPHELVF
Sbjct: 175 FEAEKEEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  299 bits (765), Expect = 5e-79
 Identities = 148/177 (83%), Positives = 163/177 (92%)
 Frame = +3

Query: 12  PTEKPPKFYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQLASG 191
           P EKPPKFYPADDVKKP VNKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFL QL SG
Sbjct: 55  PAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSG 114

Query: 192 LLLVTGPFKINGVPLRRVNQSYVIATSTKVEITGLDVAKFDDKYFAKEVARKKKKGEGEF 371
           LLLVTGPFK+NGVPLRRVNQSYVIATSTKV+I G++V KF DKYF+KEV +KKKKGEGEF
Sbjct: 115 LLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEF 174

Query: 372 YEADKEEKNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHELVF 542
           +EA+KEEK+ LPQ KKDDQKAVDS+L+KSIE+V +LK YLAARFSLK+GMKPHELVF
Sbjct: 175 FEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  298 bits (764), Expect = 7e-79
 Identities = 146/180 (81%), Positives = 164/180 (91%)
 Frame = +3

Query: 3   EQKPTEKPPKFYPADDVKKPFVNKRKHKPTKLRASITPGTVLIILAGRFKGKRVVFLNQL 182
           + K  EKPPKFYPADDVKKP +NKRK KPTKLRASITPGTVLIILAGRFKGKRVVFL QL
Sbjct: 55  DSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQL 114

Query: 183 ASGLLLVTGPFKINGVPLRRVNQSYVIATSTKVEITGLDVAKFDDKYFAKEVARKKKKGE 362
           +SGLLLVTGPFK+NGVPLRRVNQ+YVIATSTKV+I+G++V KFDDKYF K+  +K KKGE
Sbjct: 115 SSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGE 174

Query: 363 GEFYEADKEEKNVLPQGKKDDQKAVDSSLIKSIESVPELKAYLAARFSLKSGMKPHELVF 542
           GEF+EA+K+E NVLPQ KKDDQKAVD +L+K+IE VPELKAYL ARFSLK+GMKPHELVF
Sbjct: 175 GEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234