BLASTX nr result

ID: Coptis25_contig00000057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000057
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149003.1| PREDICTED: uncharacterized protein LOC101211...   117   3e-24
gb|AFK38024.1| unknown [Lotus japonicus]                              103   4e-20
ref|XP_002519891.1| conserved hypothetical protein [Ricinus comm...    93   7e-17
ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
gb|ABK27016.1| unknown [Picea sitchensis]                              75   1e-11

>ref|XP_004149003.1| PREDICTED: uncharacterized protein LOC101211778 [Cucumis sativus]
           gi|449515027|ref|XP_004164551.1| PREDICTED:
           uncharacterized LOC101211778 [Cucumis sativus]
          Length = 292

 Score =  117 bits (292), Expect = 3e-24
 Identities = 95/289 (32%), Positives = 133/289 (46%), Gaps = 60/289 (20%)
 Frame = -1

Query: 731 VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTFPTSLETRFRKLKSFPGPNPKT----- 567
           VE++++Q  D  +LEQ+S+IN S      T S  P+ LE+RFRKLKSFP     T     
Sbjct: 15  VEDLLSQTQDLCLLEQISAINCSSF----THSDLPSDLESRFRKLKSFPAAKSNTRSGFD 70

Query: 566 ---------------------TPSLNSQLQDLPITPNALKS-IP--ISPPGEKTSPQPE- 462
                                +PS  S  +++  +P +    +P   S  G  TSP    
Sbjct: 71  SRNSRSVHSADESLGDDFAVFSPSKQSNKKEVGFSPKSQSQHLPDNSSKIGNSTSPMDNQ 130

Query: 461 -----------------------FSSSKIDPVCEPK------SRSR-RNGYXXXXXXXXX 372
                                  FSS +ID +  PK      S+S+  +GY         
Sbjct: 131 DRNNGSSRSKSKCRYVSSPSNSSFSSGEIDEISVPKRDGKVRSKSKSESGYSASPPQSP- 189

Query: 371 XXXXXXXPPRQVLCFWCSPXXXXXXXXXXXENRFDGLGSGKKNDEFLLSDLSTFSMKEQE 192
                   PR+  CFWCSP           +   +GLG GK N+   L+DL+ FS KEQE
Sbjct: 190 --------PRKTGCFWCSPKKTSEKKNSGNKILENGLGWGKNNE--FLADLNIFSAKEQE 239

Query: 191 KKMKRALKEQEKISRDAEQVVSWAKQLSARIDDFVIHDDSCSEDDERFK 45
           K +K+A+KE+EKI+R+AE++V WAKQ SAR++   I D+    DDE  K
Sbjct: 240 KILKKAMKEEEKINREAEKIVKWAKQASARMNISDIEDE--LSDDEEIK 286


>gb|AFK38024.1| unknown [Lotus japonicus]
          Length = 251

 Score =  103 bits (257), Expect = 4e-20
 Identities = 81/246 (32%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
 Frame = -1

Query: 731 VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTFPTSLETRFRKLKSFPGPNPKTTPSLN 552
           + EII+QA D  +L+Q+++IN +GV    TDS  P  L++RFRKLKS P  N  T P+ N
Sbjct: 15  INEIISQAQDACLLDQLAAINCAGV----TDSVLPPDLDSRFRKLKSLPA-NRTTPPTFN 69

Query: 551 SQLQDLPITPNAL---------KSIPISPPGEKTSPQPEFSSSKIDPVCEPK----SRSR 411
           ++ +      +           +S   SPP  K  P+P+  + K+    +PK    S S 
Sbjct: 70  AKARSFSTLSSRTLNKTVMGSDQSPNFSPP--KNDPEPDEHTEKVKSKSKPKHGSVSASP 127

Query: 410 RNG-------------YXXXXXXXXXXXXXXXXPPRQVLCFWCSPXXXXXXXXXXXENRF 270
            +G             +                PPR   CF CSP            ++ 
Sbjct: 128 PSGSSHTSEESSISSLFRSEGKGSKQRTLFSPSPPRMAGCFGCSPKKKKKKK-----SKE 182

Query: 269 DGLGSGKKNDEFLLSDLSTFSMKEQEKKM-KRALKEQEKISRDAEQVVSWAKQLSARIDD 93
           + +G   ++DE L SDL   S+ +Q KKM K A+KE+EK+SR+AE++V WAK +SAR++ 
Sbjct: 183 NVVGGWDQSDE-LFSDLGGLSLSKQRKKMLKMAMKEEEKVSREAEKIVEWAKSVSARMNI 241

Query: 92  FVIHDD 75
             I D+
Sbjct: 242 SDIEDE 247


>ref|XP_002519891.1| conserved hypothetical protein [Ricinus communis]
           gi|223540937|gb|EEF42495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 85/269 (31%), Positives = 119/269 (44%), Gaps = 42/269 (15%)
 Frame = -1

Query: 731 VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTFPTSLETRFRKLKSFPG---------- 582
           VEE+I+Q  D  +LEQVS IN SG     TDS  PT L+TRFRKLKSF            
Sbjct: 15  VEELISQVKDLSVLEQVSKINCSGF----TDSLLPTDLDTRFRKLKSFNTSKVQFSGTSL 70

Query: 581 -------------------PNPK-------------TTPSLNSQLQDLPITPNALKSIPI 498
                              P+ K             T  + + +L++ P        +  
Sbjct: 71  EGKRIVHGSVSDDENDEGHPSEKGSSFKDGTEIFSDTKQNPDGKLKESPNWEKIFSLLEE 130

Query: 497 SPPGEKTSPQPEFSSSKIDPVCEPKSRSRRNGYXXXXXXXXXXXXXXXXPPRQVLCFWCS 318
           +P GEK   +  +     D   + KS S  +                  PP++  CFWCS
Sbjct: 131 NPDGEK-GLEKNYKHGSYDSSSKSKSGSSVS-------PLGSSNSFLDSPPKKTGCFWCS 182

Query: 317 PXXXXXXXXXXXENRFDGLGSGKKNDEFLLSDLSTFSMKEQEKKMKRALKEQEKISRDAE 138
           P           +  +      KK+D+FL S L  FS KEQ    K+A+KE+EKI+++AE
Sbjct: 183 PKKKKNRENLKIDWAY------KKDDDFL-SVLDIFSYKEQ----KKAIKEEEKINKEAE 231

Query: 137 QVVSWAKQLSARIDDFVIHDDSCSEDDER 51
           ++V WAKQ S R+    I +D  S+DD+R
Sbjct: 232 KIVKWAKQASNRMSFHGI-EDEVSDDDKR 259


>ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|222834101|gb|EEE72578.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 47/97 (48%), Positives = 63/97 (64%)
 Frame = -1

Query: 347 PRQVLCFWCSPXXXXXXXXXXXENRFDGLGSGKKNDEFLLSDLSTFSMKEQEKKMKRALK 168
           PR+V CFWCSP                GL     N +  LSDLSTFS+KEQ+K++K+A+K
Sbjct: 228 PRKVGCFWCSPKKKQSKESL-------GLDWESNNLDEYLSDLSTFSVKEQQKRLKKAMK 280

Query: 167 EQEKISRDAEQVVSWAKQLSARIDDFVIHDDSCSEDD 57
           EQEK+S++AE++V WAKQ SAR+  F   DD  S+D+
Sbjct: 281 EQEKMSQEAEKIVKWAKQASARM-SFHGTDDVLSDDE 316



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = -1

Query: 731 VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTFPTSLETRFRKLKSFPGPNPKTTPSLN 552
           V+E+++Q  +  +LEQVS IN SG     TDS  P  LETRF KLKSFP P    TP+ N
Sbjct: 15  VDELVSQTQELCVLEQVSKINCSGF----TDSVLPADLETRFHKLKSFP-PTKSKTPTTN 69

Query: 551 SQL 543
             L
Sbjct: 70  KSL 72


>gb|ABK27016.1| unknown [Picea sitchensis]
          Length = 240

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = -1

Query: 245 NDEFLLSDLSTFSMKEQEKKMKRALKEQEKISRDAEQVVSWAKQLSARIDDFVIHDDSCS 66
           +DEFL +DLSTFS+K Q K++K+ALKE++K++RDAE +V W KQ SAR+DD V+  D   
Sbjct: 177 DDEFL-TDLSTFSLKGQRKQLKKALKEEQKVNRDAEDLVKWVKQASARMDDRVL--DDLL 233

Query: 65  EDDERFK 45
            D+E FK
Sbjct: 234 SDEEEFK 240


Top